RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 LOC107984156A0A0G2JMH3 177 aa9.79□□□□□ -0.84
APOBEC3D-202ENST00000427494 MIAQ16674 131 aa9.79□□□□□ -0.84
APOBEC3D-202ENST00000427494 ARL17AQ8IVW1 177 aa9.79□□□□□ -0.84
APOBEC3D-202ENST00000427494 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.78□□□□□ -0.84
APOBEC3D-202ENST00000427494 A0A0B4J2C4 111 aa9.78□□□□□ -0.84
APOBEC3D-202ENST00000427494 F5H768 121 aa9.78□□□□□ -0.84
APOBEC3D-202ENST00000427494 PAX4O43316 350 aa9.78□□□□□ -0.84
APOBEC3D-202ENST00000427494 EIF4EBP3O60516 100 aaPredicted RBP9.78□□□□□ -0.84
APOBEC3D-202ENST00000427494 TIMM17BO60830 172 aa9.78□□□□□ -0.84
APOBEC3D-202ENST00000427494 DAD1P61803 113 aa9.78□□□□□ -0.84
APOBEC3D-202ENST00000427494 Q9H8V8 135 aa9.78□□□□□ -0.84
APOBEC3D-202ENST00000427494 A0A096LPF7 62 aa9.77□□□□□ -0.84
APOBEC3D-202ENST00000427494 MIFP14174 115 aa9.77□□□□□ -0.84
APOBEC3D-202ENST00000427494 Q8NAQ8 132 aa9.77□□□□□ -0.84
APOBEC3D-202ENST00000427494 NPC2P61916 151 aa9.77□□□□□ -0.85
APOBEC3D-202ENST00000427494 KRTAP24-1Q3LI83 254 aa9.76□□□□□ -0.85
APOBEC3D-202ENST00000427494 LYRM7Q5U5X0 104 aa9.76□□□□□ -0.85
APOBEC3D-202ENST00000427494 CELA1Q9UNI1 258 aa9.76□□□□□ -0.85
APOBEC3D-202ENST00000427494 F8P00451 2351 aa9.76□□□□□ -0.85
APOBEC3D-202ENST00000427494 PSMB2P49721 201 aa9.75□□□□□ -0.85
APOBEC3D-202ENST00000427494 RNF183Q96D59 192 aa9.75□□□□□ -0.85
APOBEC3D-202ENST00000427494 F8W1H4 67 aa9.75□□□□□ -0.85
APOBEC3D-202ENST00000427494 H7C2G1 150 aa9.75□□□□□ -0.85
APOBEC3D-202ENST00000427494 K7ERU9 68 aa9.75□□□□□ -0.85
APOBEC3D-202ENST00000427494 IGHV3-33P01772 117 aa9.75□□□□□ -0.85
APOBEC3D-202ENST00000427494 RBX1P62877 108 aa9.75□□□□□ -0.85
APOBEC3D-202ENST00000427494 CIRBPQ14011 172 aaKnown RBP9.75□□□□□ -0.85
APOBEC3D-202ENST00000427494 RNF151Q2KHN1 245 aa9.75□□□□□ -0.85
APOBEC3D-202ENST00000427494 DAND5Q8N907 189 aa9.75□□□□□ -0.85
APOBEC3D-202ENST00000427494 ZNF625Q96I27 306 aaPredicted RBP9.75□□□□□ -0.85
APOBEC3D-202ENST00000427494 NBEAL2Q6ZNJ1 2754 aa9.74□□□□□ -0.85
APOBEC3D-202ENST00000427494 TMEM262E9PQX1 116 aa9.74□□□□□ -0.85
APOBEC3D-202ENST00000427494 OXLD1Q5BKU9 147 aa9.74□□□□□ -0.85
APOBEC3D-202ENST00000427494 ERG28Q9UKR5 140 aa9.74□□□□□ -0.85
APOBEC3D-202ENST00000427494 IFITM1P13164 125 aa9.74□□□□□ -0.85
APOBEC3D-202ENST00000427494 PRIMA1Q86XR5 153 aa9.74□□□□□ -0.85
APOBEC3D-202ENST00000427494 MTURNQ8N3F0 131 aa9.74□□□□□ -0.85
APOBEC3D-202ENST00000427494 ATP5G1P05496 136 aa9.73□□□□□ -0.85
APOBEC3D-202ENST00000427494 SPART-AS1P0CW21 52 aa9.73□□□□□ -0.85
APOBEC3D-202ENST00000427494 SCGB1C2P0DMR2 95 aa9.73□□□□□ -0.85
APOBEC3D-202ENST00000427494 WFDC2Q14508 124 aa9.73□□□□□ -0.85
APOBEC3D-202ENST00000427494 Q1RN00 199 aa9.73□□□□□ -0.85
APOBEC3D-202ENST00000427494 PRO0461Q9UI25 63 aa9.72□□□□□ -0.85
APOBEC3D-202ENST00000427494 A0A0U1RRA0 63 aa9.72□□□□□ -0.85
APOBEC3D-202ENST00000427494 KRTAP10-11P60412 298 aa9.72□□□□□ -0.85
APOBEC3D-202ENST00000427494 MEIG1Q5JSS6 88 aa9.72□□□□□ -0.85
APOBEC3D-202ENST00000427494 TRAV26-1A0A087WT03 109 aa9.71□□□□□ -0.86
APOBEC3D-202ENST00000427494 LINC00959A0A1B0GUT2 108 aa9.71□□□□□ -0.86
APOBEC3D-202ENST00000427494 A0A1B0GUV1 79 aa9.71□□□□□ -0.86
APOBEC3D-202ENST00000427494 TCL1BO95988 128 aa9.71□□□□□ -0.86
APOBEC3D-202ENST00000427494 HTN3P15516 51 aa9.71□□□□□ -0.86
APOBEC3D-202ENST00000427494 HERV-K104P63124 156 aa9.71□□□□□ -0.86
APOBEC3D-202ENST00000427494 C3orf56Q8N813 242 aa9.71□□□□□ -0.86
APOBEC3D-202ENST00000427494 COX7B2Q8TF08 81 aa9.71□□□□□ -0.86
APOBEC3D-202ENST00000427494 IGHV3OR16-9A0A0B4J2B5 98 aa9.7□□□□□ -0.86
APOBEC3D-202ENST00000427494 TOMM7Q9P0U1 55 aa9.7□□□□□ -0.86
APOBEC3D-202ENST00000427494 TRBV20-1A0A075B6N2 111 aa9.7□□□□□ -0.86
APOBEC3D-202ENST00000427494 LINC00308Q8TCZ7 52 aa9.7□□□□□ -0.86
APOBEC3D-202ENST00000427494 TRRAPQ9Y4A5 3859 aa9.69□□□□□ -0.86
APOBEC3D-202ENST00000427494 C5orf38Q86SI9 138 aa9.69□□□□□ -0.86
APOBEC3D-202ENST00000427494 A0A087WZ39 114 aa9.68□□□□□ -0.86
APOBEC3D-202ENST00000427494 TEX48A0A1B0GUV7 120 aa9.68□□□□□ -0.86
APOBEC3D-202ENST00000427494 SS18Q15532 418 aa9.68□□□□□ -0.86
APOBEC3D-202ENST00000427494 CLPSL2Q6UWE3 100 aa9.68□□□□□ -0.86
APOBEC3D-202ENST00000427494 COPS9Q8WXC6 57 aa9.68□□□□□ -0.86
APOBEC3D-202ENST00000427494 CBY1Q9Y3M2 126 aa9.68□□□□□ -0.86
APOBEC3D-202ENST00000427494 G3V4G9 280 aa9.67□□□□□ -0.86
APOBEC3D-202ENST00000427494 XCL1P47992 114 aa9.67□□□□□ -0.86
APOBEC3D-202ENST00000427494 SHISA2Q6UWI4 295 aa9.67□□□□□ -0.86
APOBEC3D-202ENST00000427494 SH2D6Q7Z4S9 175 aa9.67□□□□□ -0.86
APOBEC3D-202ENST00000427494 VPS25Q9BRG1 176 aa9.67□□□□□ -0.86
APOBEC3D-202ENST00000427494 RETNQ9HD89 108 aa9.67□□□□□ -0.86
APOBEC3D-202ENST00000427494 MRPL23Q16540 153 aaKnown RBP9.66□□□□□ -0.86
APOBEC3D-202ENST00000427494 ETDBQ3ZM63 59 aa9.66□□□□□ -0.86
APOBEC3D-202ENST00000427494 TRIAP1O43715 76 aa9.66□□□□□ -0.86
APOBEC3D-202ENST00000427494 EGFEM1PQ0D2K5 195 aa9.66□□□□□ -0.86
APOBEC3D-202ENST00000427494 SOSTDC1Q6X4U4 206 aa9.66□□□□□ -0.86
APOBEC3D-202ENST00000427494 ICOSQ9Y6W8 199 aa9.66□□□□□ -0.86
APOBEC3D-202ENST00000427494 TRBV30A0A0K0K1B3 111 aa9.65□□□□□ -0.86
APOBEC3D-202ENST00000427494 RPL13AP40429 203 aaKnown RBP9.65□□□□□ -0.86
APOBEC3D-202ENST00000427494 SMCPP49901 116 aaPredicted RBP9.65□□□□□ -0.86
APOBEC3D-202ENST00000427494 FLNBO75369 2602 aaKnown RBP9.65□□□□□ -0.87
APOBEC3D-202ENST00000427494 LINC00269Q8N2A0 174 aa9.64□□□□□ -0.87
APOBEC3D-202ENST00000427494 Q8N3U1 123 aa9.64□□□□□ -0.87
APOBEC3D-202ENST00000427494 ANGP03950 147 aaKnown RBP9.63□□□□□ -0.87
APOBEC3D-202ENST00000427494 C11orf68Q9H3H3 251 aaKnown RBP9.63□□□□□ -0.87
APOBEC3D-202ENST00000427494 ATXN8Q156A1 80 aa9.62□□□□□ -0.87
APOBEC3D-202ENST00000427494 REG3AQ06141 175 aa9.61□□□□□ -0.87
APOBEC3D-202ENST00000427494 LELP1Q5T871 98 aa9.61□□□□□ -0.87
APOBEC3D-202ENST00000427494 MIR7-3HGQ8N6C7 128 aa9.61□□□□□ -0.87
APOBEC3D-202ENST00000427494 COX6CP09669 75 aa9.61□□□□□ -0.87
APOBEC3D-202ENST00000427494 LINC00158P58513 81 aa9.61□□□□□ -0.87
APOBEC3D-202ENST00000427494 C6orf226Q5I0X4 101 aa9.61□□□□□ -0.87
APOBEC3D-202ENST00000427494 IGLV10-54A0A075B6I4 117 aa9.6□□□□□ -0.87
APOBEC3D-202ENST00000427494 LINC01561Q8N1V8 128 aa9.6□□□□□ -0.87
APOBEC3D-202ENST00000427494 PPDPFQ9H3Y8 114 aa9.6□□□□□ -0.87
APOBEC3D-202ENST00000427494 FBN1P35555 2871 aaKnown RBP9.6□□□□□ -0.87
APOBEC3D-202ENST00000427494 IBA57-AS1B1ANH7 110 aa9.59□□□□□ -0.87
APOBEC3D-202ENST00000427494 C9JAW5 83 aa9.59□□□□□ -0.87
APOBEC3D-202ENST00000427494 CD164L2Q6UWJ8 174 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms