RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 H3BNG1 76 aa18.35■□□□□ 0.53
SH3GL3-202ENST00000427482 C10orf126Q8N4M7 172 aa18.35■□□□□ 0.53
SH3GL3-202ENST00000427482 NBEAL1Q6ZS30 2694 aa18.34■□□□□ 0.53
SH3GL3-202ENST00000427482 IGKV3OR2-268A0A0C4DH90 116 aa18.34■□□□□ 0.53
SH3GL3-202ENST00000427482 PTTG1IPP53801 180 aa18.34■□□□□ 0.53
SH3GL3-202ENST00000427482 SMIM1B2RUZ4 78 aa18.33■□□□□ 0.53
SH3GL3-202ENST00000427482 ZFAND6Q6FIF0 208 aa18.33■□□□□ 0.53
SH3GL3-202ENST00000427482 NDUFA12Q9UI09 145 aa18.33■□□□□ 0.53
SH3GL3-202ENST00000427482 DEFB121Q5J5C9 76 aa18.33■□□□□ 0.52
SH3GL3-202ENST00000427482 LELP1Q5T871 98 aa18.33■□□□□ 0.52
SH3GL3-202ENST00000427482 SRSF9Q13242 221 aaKnown RBP eCLIP18.32■□□□□ 0.52
SH3GL3-202ENST00000427482 A0A0J9YXY3 114 aa18.31■□□□□ 0.52
SH3GL3-202ENST00000427482 C11orf45Q8TAV5 145 aa18.31■□□□□ 0.52
SH3GL3-202ENST00000427482 LINC00959A0A1B0GUT2 108 aa18.3■□□□□ 0.52
SH3GL3-202ENST00000427482 NANOS2P60321 138 aaKnown RBP18.3■□□□□ 0.52
SH3GL3-202ENST00000427482 MRAPQ8TCY5 172 aa18.28■□□□□ 0.52
SH3GL3-202ENST00000427482 SMIM13P0DJ93 91 aa18.28■□□□□ 0.52
SH3GL3-202ENST00000427482 NHP2Q9NX24 153 aaKnown RBP18.28■□□□□ 0.52
SH3GL3-202ENST00000427482 IGHV3OR16-9A0A0B4J2B5 98 aa18.26■□□□□ 0.51
SH3GL3-202ENST00000427482 NDUFA1O15239 70 aa18.26■□□□□ 0.51
SH3GL3-202ENST00000427482 IGHV3-30P01768 117 aa18.26■□□□□ 0.51
SH3GL3-202ENST00000427482 IGHV3-30-5P0DP03 117 aa18.26■□□□□ 0.51
SH3GL3-202ENST00000427482 LYPD5Q6UWN5 251 aa18.26■□□□□ 0.51
SH3GL3-202ENST00000427482 TMEM238C9JI98 176 aa18.26■□□□□ 0.51
SH3GL3-202ENST00000427482 MGAM2Q2M2H8 2515 aa18.25■□□□□ 0.51
SH3GL3-202ENST00000427482 Q8N3U1 123 aa18.25■□□□□ 0.51
SH3GL3-202ENST00000427482 DEFB131BA0A096LNP1 70 aa18.24■□□□□ 0.51
SH3GL3-202ENST00000427482 K7ERJ3 54 aa18.24■□□□□ 0.51
SH3GL3-202ENST00000427482 SS18Q15532 418 aa18.23■□□□□ 0.51
SH3GL3-202ENST00000427482 RAB37Q96AX2 223 aa18.23■□□□□ 0.51
SH3GL3-202ENST00000427482 LITAFQ99732 161 aa18.23■□□□□ 0.51
SH3GL3-202ENST00000427482 C9orf118A6NHY6 69 aa18.23■□□□□ 0.51
SH3GL3-202ENST00000427482 CLPSL2Q6UWE3 100 aa18.23■□□□□ 0.51
SH3GL3-202ENST00000427482 LINC00269Q8N2A0 174 aa18.23■□□□□ 0.51
SH3GL3-202ENST00000427482 TMEM238LA0A1B0GVL6 79 aa18.22■□□□□ 0.51
SH3GL3-202ENST00000427482 A0A1B0GWB2 263 aa18.22■□□□□ 0.51
SH3GL3-202ENST00000427482 A6NJY4 79 aa18.22■□□□□ 0.51
SH3GL3-202ENST00000427482 CCL25O15444 150 aa18.22■□□□□ 0.51
SH3GL3-202ENST00000427482 A0A087WZ39 114 aa18.21■□□□□ 0.51
SH3GL3-202ENST00000427482 ANGP03950 147 aaKnown RBP18.21■□□□□ 0.51
SH3GL3-202ENST00000427482 Q9H8V8 135 aa18.2■□□□□ 0.5
SH3GL3-202ENST00000427482 TIMM17BO60830 172 aa18.18■□□□□ 0.5
SH3GL3-202ENST00000427482 XCL1P47992 114 aa18.18■□□□□ 0.5
SH3GL3-202ENST00000427482 REG3AQ06141 175 aa18.18■□□□□ 0.5
SH3GL3-202ENST00000427482 ZNF625Q96I27 306 aaPredicted RBP18.18■□□□□ 0.5
SH3GL3-202ENST00000427482 C5orf38Q86SI9 138 aa18.17■□□□□ 0.5
SH3GL3-202ENST00000427482 SPANXDQ9BXN6 97 aa18.17■□□□□ 0.5
SH3GL3-202ENST00000427482 SPANXCQ9NY87 97 aa18.17■□□□□ 0.5
SH3GL3-202ENST00000427482 HUWE1Q7Z6Z7 4374 aaKnown RBP18.17■□□□□ 0.5
SH3GL3-202ENST00000427482 H3BUT2 72 aa18.16■□□□□ 0.5
SH3GL3-202ENST00000427482 COX7B2Q8TF08 81 aa18.16■□□□□ 0.5
SH3GL3-202ENST00000427482 VAMP3Q15836 100 aa18.16■□□□□ 0.5
SH3GL3-202ENST00000427482 ADAMTSL4-AS1Q5T5F5 129 aa18.16■□□□□ 0.5
SH3GL3-202ENST00000427482 TRAV10A0A0B4J240 114 aa18.14■□□□□ 0.5
SH3GL3-202ENST00000427482 NAA38Q9BRA0 125 aaKnown RBP18.14■□□□□ 0.5
SH3GL3-202ENST00000427482 MUSTN1Q8IVN3 82 aa18.14■□□□□ 0.49
SH3GL3-202ENST00000427482 MIAQ16674 131 aa18.13■□□□□ 0.49
SH3GL3-202ENST00000427482 HERV-K104P63124 156 aa18.12■□□□□ 0.49
SH3GL3-202ENST00000427482 CD164L2Q6UWJ8 174 aa18.12■□□□□ 0.49
SH3GL3-202ENST00000427482 LINC01561Q8N1V8 128 aa18.12■□□□□ 0.49
SH3GL3-202ENST00000427482 CHCHD10Q8WYQ3 142 aaPredicted RBP18.12■□□□□ 0.49
SH3GL3-202ENST00000427482 RPL24P83731 157 aaKnown RBP18.12■□□□□ 0.49
SH3GL3-202ENST00000427482 ESRGQ1W209 222 aa18.11■□□□□ 0.49
SH3GL3-202ENST00000427482 PRR34Q9NV39 138 aa18.11■□□□□ 0.49
SH3GL3-202ENST00000427482 TOMM7Q9P0U1 55 aa18.11■□□□□ 0.49
SH3GL3-202ENST00000427482 WFDC10BQ8IUB3 73 aa18.1■□□□□ 0.49
SH3GL3-202ENST00000427482 A4D1N5 150 aa18.09■□□□□ 0.49
SH3GL3-202ENST00000427482 UBE2V1Q13404 147 aa18.09■□□□□ 0.49
SH3GL3-202ENST00000427482 CIRBPQ14011 172 aaKnown RBP18.09■□□□□ 0.49
SH3GL3-202ENST00000427482 KLK12Q9UKR0 248 aa18.09■□□□□ 0.49
SH3GL3-202ENST00000427482 A0A1W2PPM0 123 aa18.09■□□□□ 0.49
SH3GL3-202ENST00000427482 IGLL5B9A064 214 aa18.09■□□□□ 0.49
SH3GL3-202ENST00000427482 IGLV10-54A0A075B6I4 117 aa18.08■□□□□ 0.48
SH3GL3-202ENST00000427482 APOMO95445 188 aa18.08■□□□□ 0.48
SH3GL3-202ENST00000427482 CFC1BP0CG36 223 aa18.08■□□□□ 0.48
SH3GL3-202ENST00000427482 CFC1P0CG37 223 aa18.08■□□□□ 0.48
SH3GL3-202ENST00000427482 IGHV3-33P01772 117 aa18.07■□□□□ 0.48
SH3GL3-202ENST00000427482 PRSS2P07478 247 aa18.07■□□□□ 0.48
SH3GL3-202ENST00000427482 COX7A2LO14548 114 aa18.05■□□□□ 0.48
SH3GL3-202ENST00000427482 C15orf53Q8NAA6 179 aa18.05■□□□□ 0.48
SH3GL3-202ENST00000427482 IFITM1P13164 125 aa18.05■□□□□ 0.48
SH3GL3-202ENST00000427482 MEIG1Q5JSS6 88 aa18.05■□□□□ 0.48
SH3GL3-202ENST00000427482 ENHOQ6UWT2 76 aa18.05■□□□□ 0.48
SH3GL3-202ENST00000427482 FOXI1Q12951 378 aa18.04■□□□□ 0.48
SH3GL3-202ENST00000427482 DAND5Q8N907 189 aa18.04■□□□□ 0.48
SH3GL3-202ENST00000427482 B9D2Q9BPU9 175 aa18.04■□□□□ 0.48
SH3GL3-202ENST00000427482 FABP2P12104 132 aa18.02■□□□□ 0.48
SH3GL3-202ENST00000427482 Q8IZM0 81 aa18.02■□□□□ 0.48
SH3GL3-202ENST00000427482 PGPEP1Q9NXJ5 209 aa18.02■□□□□ 0.48
SH3GL3-202ENST00000427482 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.02■□□□□ 0.47
SH3GL3-202ENST00000427482 EIF4EBP3O60516 100 aaPredicted RBP18.02■□□□□ 0.47
SH3GL3-202ENST00000427482 A0A0B4J2C4 111 aa18.01■□□□□ 0.47
SH3GL3-202ENST00000427482 NPC2P61916 151 aa18.01■□□□□ 0.47
SH3GL3-202ENST00000427482 SFTA2Q6UW10 78 aa18.01■□□□□ 0.47
SH3GL3-202ENST00000427482 A0A0U1RRA0 63 aa18■□□□□ 0.47
SH3GL3-202ENST00000427482 CRPP02741 224 aa18■□□□□ 0.47
SH3GL3-202ENST00000427482 GAGE12HA6NDE8 117 aa17.99■□□□□ 0.47
SH3GL3-202ENST00000427482 K7EP34 96 aa17.99■□□□□ 0.47
SH3GL3-202ENST00000427482 C6orf226Q5I0X4 101 aa17.99■□□□□ 0.47
SH3GL3-202ENST00000427482 PRO1854Q9UHT4 67 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms