RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 C20orf203Q8NBC4 194 aa6.08□□□□□ -1.44
SH3D19-204ENST00000427414 IGLV4-3A0A075B6K6 122 aa6.08□□□□□ -1.44
SH3D19-204ENST00000427414 TRAV8-3A0A0A6YYJ7 113 aa6.08□□□□□ -1.44
SH3D19-204ENST00000427414 ADAMTSL4-AS1Q5T5F5 129 aa6.08□□□□□ -1.44
SH3D19-204ENST00000427414 LITAFQ99732 161 aa6.08□□□□□ -1.44
SH3D19-204ENST00000427414 RPL35AP18077 110 aaKnown RBP6.07□□□□□ -1.44
SH3D19-204ENST00000427414 FAM240AA0A1B0GVK7 77 aa6.07□□□□□ -1.44
SH3D19-204ENST00000427414 PRIMA1Q86XR5 153 aa6.07□□□□□ -1.44
SH3D19-204ENST00000427414 NDUFA12Q9UI09 145 aa6.07□□□□□ -1.44
SH3D19-204ENST00000427414 CSDC2Q9Y534 153 aaKnown RBP6.07□□□□□ -1.44
SH3D19-204ENST00000427414 X6R8D5 127 aa6.07□□□□□ -1.44
SH3D19-204ENST00000427414 K7EQD1 137 aa6.06□□□□□ -1.44
SH3D19-204ENST00000427414 LST1O00453 97 aa6.06□□□□□ -1.44
SH3D19-204ENST00000427414 FN1P02751 2386 aaKnown RBP6.06□□□□□ -1.44
SH3D19-204ENST00000427414 NOTCH2Q04721 2471 aa6.06□□□□□ -1.44
SH3D19-204ENST00000427414 TRGV1A0A0A0MS02 117 aa6.06□□□□□ -1.44
SH3D19-204ENST00000427414 RPL36AP83881 106 aaKnown RBP6.06□□□□□ -1.44
SH3D19-204ENST00000427414 RPL36ALQ969Q0 106 aaKnown RBP6.06□□□□□ -1.44
SH3D19-204ENST00000427414 TMEM101Q96IK0 257 aa6.06□□□□□ -1.44
SH3D19-204ENST00000427414 NSD1Q96L73 2696 aaPredicted RBP6.06□□□□□ -1.44
SH3D19-204ENST00000427414 MRPS36P82909 103 aaKnown RBP6.05□□□□□ -1.44
SH3D19-204ENST00000427414 MIAQ16674 131 aa6.05□□□□□ -1.44
SH3D19-204ENST00000427414 RNASE13Q5GAN3 156 aaKnown RBP6.05□□□□□ -1.44
SH3D19-204ENST00000427414 TMEM126AQ9H061 195 aa6.05□□□□□ -1.44
SH3D19-204ENST00000427414 IGHV1-58A0A0C4DH39 117 aa6.05□□□□□ -1.44
SH3D19-204ENST00000427414 TRBV7-7A0A0K0K1E9 115 aa6.05□□□□□ -1.44
SH3D19-204ENST00000427414 FAM236AA0A1B0GUQ0 79 aa6.05□□□□□ -1.44
SH3D19-204ENST00000427414 FAM236BA0A1B0GV22 79 aa6.05□□□□□ -1.44
SH3D19-204ENST00000427414 LINC00694P0DN24 101 aa6.05□□□□□ -1.44
SH3D19-204ENST00000427414 HTN1P15515 57 aa6.05□□□□□ -1.44
SH3D19-204ENST00000427414 CEMP1Q6PRD7 247 aaPredicted RBP6.05□□□□□ -1.44
SH3D19-204ENST00000427414 SPANXDQ9BXN6 97 aa6.05□□□□□ -1.44
SH3D19-204ENST00000427414 WFDC10AQ9H1F0 79 aa6.05□□□□□ -1.44
SH3D19-204ENST00000427414 SPANXCQ9NY87 97 aa6.05□□□□□ -1.44
SH3D19-204ENST00000427414 DEFB121Q5J5C9 76 aa6.04□□□□□ -1.44
SH3D19-204ENST00000427414 NOP10Q9NPE3 64 aaKnown RBP6.04□□□□□ -1.44
SH3D19-204ENST00000427414 ACANP16112 2415 aa6.04□□□□□ -1.44
SH3D19-204ENST00000427414 C5orf47Q569G3 176 aa6.04□□□□□ -1.44
SH3D19-204ENST00000427414 KPRPQ5T749 579 aaPredicted RBP6.04□□□□□ -1.44
SH3D19-204ENST00000427414 IGHV4-30-4P0DP06 118 aa6.03□□□□□ -1.44
SH3D19-204ENST00000427414 Q6ZTI0 123 aa6.03□□□□□ -1.44
SH3D19-204ENST00000427414 FAM19A3Q7Z5A8 133 aa6.03□□□□□ -1.44
SH3D19-204ENST00000427414 DAND5Q8N907 189 aa6.03□□□□□ -1.44
SH3D19-204ENST00000427414 SONP18583 2426 aaKnown RBP6.03□□□□□ -1.44
SH3D19-204ENST00000427414 IGHV3OR16-12A0A075B7B8 117 aa6.03□□□□□ -1.44
SH3D19-204ENST00000427414 CYSRT1A8MQ03 144 aa6.03□□□□□ -1.44
SH3D19-204ENST00000427414 VSIG2Q96IQ7 327 aa6.03□□□□□ -1.44
SH3D19-204ENST00000427414 C11orf68Q9H3H3 251 aaKnown RBP6.03□□□□□ -1.44
SH3D19-204ENST00000427414 HIVEP1P15822 2718 aa6.03□□□□□ -1.44
SH3D19-204ENST00000427414 MAP1AP78559 2803 aaPredicted RBP6.03□□□□□ -1.44
SH3D19-204ENST00000427414 IGHV3-73A0A0B4J1V6 119 aa6.02□□□□□ -1.44
SH3D19-204ENST00000427414 FHL2Q14192 279 aa6.02□□□□□ -1.44
SH3D19-204ENST00000427414 PPDPFQ9H3Y8 114 aa6.02□□□□□ -1.44
SH3D19-204ENST00000427414 TRGV2A0A075B6R0 118 aa6.02□□□□□ -1.45
SH3D19-204ENST00000427414 H3BNG1 76 aa6.02□□□□□ -1.45
SH3D19-204ENST00000427414 ACYP1P07311 99 aa6.02□□□□□ -1.45
SH3D19-204ENST00000427414 SPATA3Q8NHX4 192 aa6.02□□□□□ -1.45
SH3D19-204ENST00000427414 CHCHD7Q9BUK0 85 aa6.02□□□□□ -1.45
SH3D19-204ENST00000427414 NACAE9PAV3 2078 aa6.02□□□□□ -1.45
SH3D19-204ENST00000427414 C9orf153Q5TBE3 101 aa6.02□□□□□ -1.45
SH3D19-204ENST00000427414 Q6ZSN1 163 aa6.02□□□□□ -1.45
SH3D19-204ENST00000427414 Q8NAQ8 132 aa6.02□□□□□ -1.45
SH3D19-204ENST00000427414 FAM104AQ969W3 186 aa6.02□□□□□ -1.45
SH3D19-204ENST00000427414 IMUPQ9GZP8 106 aa6.02□□□□□ -1.45
SH3D19-204ENST00000427414 MAST4O15021 2626 aa6.01□□□□□ -1.45
SH3D19-204ENST00000427414 TLN2Q9Y4G6 2542 aa6.01□□□□□ -1.45
SH3D19-204ENST00000427414 TRGV4A0A0C4DH28 118 aa6.01□□□□□ -1.45
SH3D19-204ENST00000427414 TINCRA0A1B0GVN0 87 aa6.01□□□□□ -1.45
SH3D19-204ENST00000427414 SPART-AS1P0CW21 52 aa6.01□□□□□ -1.45
SH3D19-204ENST00000427414 PRO0255Q9UI72 69 aa6.01□□□□□ -1.45
SH3D19-204ENST00000427414 TIRAPP58753 221 aa6□□□□□ -1.45
SH3D19-204ENST00000427414 A0A0U1RRA0 63 aa6□□□□□ -1.45
SH3D19-204ENST00000427414 CIRBPQ14011 172 aaKnown RBP6□□□□□ -1.45
SH3D19-204ENST00000427414 C3orf22Q8N5N4 141 aa6□□□□□ -1.45
SH3D19-204ENST00000427414 UBE2D4Q9Y2X8 147 aa6□□□□□ -1.45
SH3D19-204ENST00000427414 PRM2P04554 102 aa5.99□□□□□ -1.45
SH3D19-204ENST00000427414 KRTAP10-11P60412 298 aa5.99□□□□□ -1.45
SH3D19-204ENST00000427414 LINC00643Q86TS7 51 aa5.99□□□□□ -1.45
SH3D19-204ENST00000427414 SMCR5Q8TEV8 140 aa5.99□□□□□ -1.45
SH3D19-204ENST00000427414 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.99□□□□□ -1.45
SH3D19-204ENST00000427414 IGKV2-29A2NJV5 120 aaPredicted RBP5.99□□□□□ -1.45
SH3D19-204ENST00000427414 TIMM17BO60830 172 aa5.99□□□□□ -1.45
SH3D19-204ENST00000427414 ZNF625Q96I27 306 aaPredicted RBP5.99□□□□□ -1.45
SH3D19-204ENST00000427414 CDKN2A-AS1Q9UH64 79 aa5.99□□□□□ -1.45
SH3D19-204ENST00000427414 IGHV4-28A0A0C4DH34 117 aa5.98□□□□□ -1.45
SH3D19-204ENST00000427414 COX7A2LO14548 114 aa5.98□□□□□ -1.45
SH3D19-204ENST00000427414 UQCRQO14949 82 aa5.98□□□□□ -1.45
SH3D19-204ENST00000427414 ATP5G1P05496 136 aa5.98□□□□□ -1.45
SH3D19-204ENST00000427414 LINC00308Q8TCZ7 52 aa5.98□□□□□ -1.45
SH3D19-204ENST00000427414 TMEM243Q9BU79 118 aa5.98□□□□□ -1.45
SH3D19-204ENST00000427414 C1orf43Q9BWL3 253 aa5.98□□□□□ -1.45
SH3D19-204ENST00000427414 Q9UF83 564 aa5.98□□□□□ -1.45
SH3D19-204ENST00000427414 CUBNO60494 3623 aa5.97□□□□□ -1.45
SH3D19-204ENST00000427414 HERVK_113P63121 156 aa5.97□□□□□ -1.45
SH3D19-204ENST00000427414 FAM222AQ5U5X8 452 aa5.97□□□□□ -1.45
SH3D19-204ENST00000427414 C2CD3Q4AC94 2353 aa5.97□□□□□ -1.45
SH3D19-204ENST00000427414 IGLV5-45A0A087WSX0 123 aa5.97□□□□□ -1.45
SH3D19-204ENST00000427414 LOC107984640A0A0U1RRK4 108 aa5.97□□□□□ -1.45
SH3D19-204ENST00000427414 NDUFA1O15239 70 aa5.97□□□□□ -1.45
SH3D19-204ENST00000427414 BAALC-AS2P0C853 105 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms