RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 CCL24O00175 119 aa10.23□□□□□ -0.77
ERCC3-202ENST00000426778 NHLRC4P0CG21 123 aaPredicted RBP10.23□□□□□ -0.77
ERCC3-202ENST00000426778 TIRAPP58753 221 aa10.23□□□□□ -0.77
ERCC3-202ENST00000426778 HERVK_113P63121 156 aa10.23□□□□□ -0.77
ERCC3-202ENST00000426778 YAE1D1Q9NRH1 226 aa10.23□□□□□ -0.77
ERCC3-202ENST00000426778 HELZ2Q9BYK8 2649 aaKnown RBP10.22□□□□□ -0.77
ERCC3-202ENST00000426778 DNAJC9-AS1A6NH13 148 aa10.22□□□□□ -0.77
ERCC3-202ENST00000426778 IGLV5-45A0A087WSX0 123 aa10.22□□□□□ -0.77
ERCC3-202ENST00000426778 GAGE6Q13070 117 aa10.22□□□□□ -0.77
ERCC3-202ENST00000426778 SS18L2Q9UHA2 77 aa10.22□□□□□ -0.77
ERCC3-202ENST00000426778 C11orf68Q9H3H3 251 aaKnown RBP10.21□□□□□ -0.77
ERCC3-202ENST00000426778 FASNP49327 2511 aaKnown RBP10.21□□□□□ -0.77
ERCC3-202ENST00000426778 IGLV5-39A0A0G2JS06 123 aa10.21□□□□□ -0.78
ERCC3-202ENST00000426778 B5MCH6 92 aa10.21□□□□□ -0.78
ERCC3-202ENST00000426778 CDC42SE2Q9NRR3 84 aa10.21□□□□□ -0.78
ERCC3-202ENST00000426778 UBE2L6O14933 153 aa10.2□□□□□ -0.78
ERCC3-202ENST00000426778 GIG44P09565 113 aaPredicted RBP10.19□□□□□ -0.78
ERCC3-202ENST00000426778 FAM218AQ96MZ4 157 aa10.19□□□□□ -0.78
ERCC3-202ENST00000426778 Q9HAA7 133 aa10.19□□□□□ -0.78
ERCC3-202ENST00000426778 CCDC179H3BU77 68 aa10.19□□□□□ -0.78
ERCC3-202ENST00000426778 NDUFV3P56181 108 aaKnown RBP10.19□□□□□ -0.78
ERCC3-202ENST00000426778 ANK3Q12955 4377 aaKnown RBP10.18□□□□□ -0.78
ERCC3-202ENST00000426778 F5H768 121 aa10.18□□□□□ -0.78
ERCC3-202ENST00000426778 IFITM1P13164 125 aa10.18□□□□□ -0.78
ERCC3-202ENST00000426778 M0QXV9 152 aa10.18□□□□□ -0.78
ERCC3-202ENST00000426778 KRTAP1-3Q8IUG1 177 aa10.18□□□□□ -0.78
ERCC3-202ENST00000426778 IGLV4-60A0A075B6I1 120 aa10.17□□□□□ -0.78
ERCC3-202ENST00000426778 H3BT86 120 aa10.17□□□□□ -0.78
ERCC3-202ENST00000426778 C3orf56Q8N813 242 aa10.17□□□□□ -0.78
ERCC3-202ENST00000426778 PDZD2O15018 2839 aa10.17□□□□□ -0.78
ERCC3-202ENST00000426778 TIMM17BO60830 172 aa10.17□□□□□ -0.78
ERCC3-202ENST00000426778 IL17DQ8TAD2 202 aa10.17□□□□□ -0.78
ERCC3-202ENST00000426778 TENM1Q9UKZ4 2725 aa10.17□□□□□ -0.78
ERCC3-202ENST00000426778 HECTD1Q9ULT8 2610 aa10.16□□□□□ -0.78
ERCC3-202ENST00000426778 TMEM243Q9BU79 118 aa10.16□□□□□ -0.78
ERCC3-202ENST00000426778 A0A096LPF7 62 aa10.16□□□□□ -0.78
ERCC3-202ENST00000426778 TRGV4A0A0C4DH28 118 aa10.16□□□□□ -0.78
ERCC3-202ENST00000426778 PFN2P35080 140 aa10.16□□□□□ -0.78
ERCC3-202ENST00000426778 DAZ2Q13117 558 aaKnown RBP10.16□□□□□ -0.78
ERCC3-202ENST00000426778 DAZ4Q86SG3 579 aaKnown RBP10.16□□□□□ -0.78
ERCC3-202ENST00000426778 C5orf38Q86SI9 138 aa10.16□□□□□ -0.78
ERCC3-202ENST00000426778 ZNF843Q8N446 348 aa10.16□□□□□ -0.78
ERCC3-202ENST00000426778 MIR7-3HGQ8N6C7 128 aa10.16□□□□□ -0.78
ERCC3-202ENST00000426778 DAZ3Q9NR90 486 aaKnown RBP10.16□□□□□ -0.78
ERCC3-202ENST00000426778 DEFB130BP0DP73 79 aa10.15□□□□□ -0.78
ERCC3-202ENST00000426778 DEFB130AP0DP74 79 aa10.15□□□□□ -0.78
ERCC3-202ENST00000426778 CLPSL2Q6UWE3 100 aa10.15□□□□□ -0.78
ERCC3-202ENST00000426778 PLAC8L1A1L4L8 177 aa10.15□□□□□ -0.78
ERCC3-202ENST00000426778 COX7A2LO14548 114 aa10.15□□□□□ -0.78
ERCC3-202ENST00000426778 CHCHD5Q9BSY4 110 aa10.14□□□□□ -0.79
ERCC3-202ENST00000426778 UNC79Q9P2D8 2635 aa10.13□□□□□ -0.79
ERCC3-202ENST00000426778 LINC00158P58513 81 aa10.13□□□□□ -0.79
ERCC3-202ENST00000426778 LINC00337Q8N6G1 96 aa10.13□□□□□ -0.79
ERCC3-202ENST00000426778 TRBV10-1A0A0K0K1A3 114 aa10.12□□□□□ -0.79
ERCC3-202ENST00000426778 BAALC-AS2P0C853 105 aa10.12□□□□□ -0.79
ERCC3-202ENST00000426778 TRRAPQ9Y4A5 3859 aa10.12□□□□□ -0.79
ERCC3-202ENST00000426778 SHISA2Q6UWI4 295 aa10.12□□□□□ -0.79
ERCC3-202ENST00000426778 ATP5G1P05496 136 aa10.11□□□□□ -0.79
ERCC3-202ENST00000426778 LINC01006Q8NI28 216 aa10.11□□□□□ -0.79
ERCC3-202ENST00000426778 SMCR5Q8TEV8 140 aa10.11□□□□□ -0.79
ERCC3-202ENST00000426778 COX7B2Q8TF08 81 aa10.11□□□□□ -0.79
ERCC3-202ENST00000426778 ATRQ13535 2644 aa10.1□□□□□ -0.79
ERCC3-202ENST00000426778 IGKV2-28A0A075B6P5 120 aa10.1□□□□□ -0.79
ERCC3-202ENST00000426778 IGKV2D-28P01615 120 aa10.1□□□□□ -0.79
ERCC3-202ENST00000426778 C9orf129Q5T035 196 aaKnown RBP10.1□□□□□ -0.79
ERCC3-202ENST00000426778 SND1-IT1Q9HBX3 110 aa10.1□□□□□ -0.79
ERCC3-202ENST00000426778 CSDC2Q9Y534 153 aaKnown RBP10.1□□□□□ -0.79
ERCC3-202ENST00000426778 C22orf24Q9Y442 160 aa10.09□□□□□ -0.79
ERCC3-202ENST00000426778 A0A087WYN8 130 aa10.09□□□□□ -0.79
ERCC3-202ENST00000426778 LINC01600Q96MT4 127 aa10.09□□□□□ -0.79
ERCC3-202ENST00000426778 TRAV25A0A0B4J276 109 aa10.08□□□□□ -0.8
ERCC3-202ENST00000426778 CRPP02741 224 aa10.08□□□□□ -0.8
ERCC3-202ENST00000426778 XCL1P47992 114 aa10.08□□□□□ -0.8
ERCC3-202ENST00000426778 OTOGQ6ZRI0 2925 aa10.07□□□□□ -0.8
ERCC3-202ENST00000426778 OR13C6PQ8NH95 151 aa10.07□□□□□ -0.8
ERCC3-202ENST00000426778 C16orf74Q96GX8 76 aa10.07□□□□□ -0.8
ERCC3-202ENST00000426778 DEFB4AO15263 64 aa10.07□□□□□ -0.8
ERCC3-202ENST00000426778 FHL2Q14192 279 aa10.07□□□□□ -0.8
ERCC3-202ENST00000426778 GAGE2AQ6NT46 116 aa10.07□□□□□ -0.8
ERCC3-202ENST00000426778 C19orf73Q9NVV2 129 aa10.07□□□□□ -0.8
ERCC3-202ENST00000426778 TRBV6-8A0A0A6YYG3 113 aa10.06□□□□□ -0.8
ERCC3-202ENST00000426778 SLPIP03973 132 aa10.06□□□□□ -0.8
ERCC3-202ENST00000426778 CCL18P55774 89 aa10.06□□□□□ -0.8
ERCC3-202ENST00000426778 FAM19A3Q7Z5A8 133 aa10.06□□□□□ -0.8
ERCC3-202ENST00000426778 SMIM11BQ8TCY0 68 aa10.06□□□□□ -0.8
ERCC3-202ENST00000426778 HERV-K104P63124 156 aa10.06□□□□□ -0.8
ERCC3-202ENST00000426778 Q8N3U1 123 aa10.06□□□□□ -0.8
ERCC3-202ENST00000426778 CSNK1G2-AS1Q8NCQ2 148 aa10.06□□□□□ -0.8
ERCC3-202ENST00000426778 FAM236AA0A1B0GUQ0 79 aa10.05□□□□□ -0.8
ERCC3-202ENST00000426778 FAM236BA0A1B0GV22 79 aa10.05□□□□□ -0.8
ERCC3-202ENST00000426778 PAX4O43316 350 aa10.05□□□□□ -0.8
ERCC3-202ENST00000426778 PRR3P79522 188 aaKnown RBP10.05□□□□□ -0.8
ERCC3-202ENST00000426778 DEFB121Q5J5C9 76 aa10.05□□□□□ -0.8
ERCC3-202ENST00000426778 SMR3AQ99954 134 aa10.05□□□□□ -0.8
ERCC3-202ENST00000426778 IGHV3OR16-9A0A0B4J2B5 98 aa10.04□□□□□ -0.8
ERCC3-202ENST00000426778 TEP1Q99973 2627 aaKnown RBP10.04□□□□□ -0.8
ERCC3-202ENST00000426778 TRBV6-4A0A1B0GX49 114 aa10.04□□□□□ -0.8
ERCC3-202ENST00000426778 IGLV1-51P01701 117 aa10.03□□□□□ -0.8
ERCC3-202ENST00000426778 IGLV10-54A0A075B6I4 117 aa10.03□□□□□ -0.8
ERCC3-202ENST00000426778 GYPEP15421 78 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms