RNA–Protein interactions for RNA: ENST00000425986.1

RTN4R-203, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 2

Gene RTN4R, Length 1,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-203ENST00000425986 Q6ZTC4 211 aa12.52□□□□□ -0.4
RTN4R-203ENST00000425986 TENM3Q9P273 2699 aa12.52□□□□□ -0.41
RTN4R-203ENST00000425986 K7EP13 123 aa12.52□□□□□ -0.41
RTN4R-203ENST00000425986 SPATA25Q9BR10 227 aa12.52□□□□□ -0.41
RTN4R-203ENST00000425986 H3BNG1 76 aa12.51□□□□□ -0.41
RTN4R-203ENST00000425986 SRSF9Q13242 221 aaKnown RBP eCLIP12.51□□□□□ -0.41
RTN4R-203ENST00000425986 MGAM2Q2M2H8 2515 aa12.51□□□□□ -0.41
RTN4R-203ENST00000425986 TM2D3Q9BRN9 247 aa12.51□□□□□ -0.41
RTN4R-203ENST00000425986 IGKV3OR2-268A0A0C4DH90 116 aa12.5□□□□□ -0.41
RTN4R-203ENST00000425986 IGLV5-39A0A0G2JS06 123 aa12.5□□□□□ -0.41
RTN4R-203ENST00000425986 C10orf126Q8N4M7 172 aa12.5□□□□□ -0.41
RTN4R-203ENST00000425986 C11orf45Q8TAV5 145 aa12.5□□□□□ -0.41
RTN4R-203ENST00000425986 SPANXB1Q9NS25 103 aaPredicted RBP12.5□□□□□ -0.41
RTN4R-203ENST00000425986 NDUFA12Q9UI09 145 aa12.5□□□□□ -0.41
RTN4R-203ENST00000425986 LELP1Q5T871 98 aa12.49□□□□□ -0.41
RTN4R-203ENST00000425986 ZFAND6Q6FIF0 208 aa12.49□□□□□ -0.41
RTN4R-203ENST00000425986 SMIM1B2RUZ4 78 aa12.49□□□□□ -0.41
RTN4R-203ENST00000425986 MRAPQ8TCY5 172 aa12.49□□□□□ -0.41
RTN4R-203ENST00000425986 A0A0J9YXY3 114 aa12.48□□□□□ -0.41
RTN4R-203ENST00000425986 LINC00959A0A1B0GUT2 108 aa12.48□□□□□ -0.41
RTN4R-203ENST00000425986 SMIM13P0DJ93 91 aa12.48□□□□□ -0.41
RTN4R-203ENST00000425986 NANOS2P60321 138 aaKnown RBP12.48□□□□□ -0.41
RTN4R-203ENST00000425986 VAMP3Q15836 100 aa12.48□□□□□ -0.41
RTN4R-203ENST00000425986 LYPD5Q6UWN5 251 aa12.47□□□□□ -0.41
RTN4R-203ENST00000425986 IGHV3OR16-9A0A0B4J2B5 98 aa12.46□□□□□ -0.41
RTN4R-203ENST00000425986 NHP2Q9NX24 153 aaKnown RBP12.46□□□□□ -0.41
RTN4R-203ENST00000425986 CBY1Q9Y3M2 126 aa12.46□□□□□ -0.41
RTN4R-203ENST00000425986 DEFB131BA0A096LNP1 70 aa12.45□□□□□ -0.42
RTN4R-203ENST00000425986 IGHV3-30P01768 117 aa12.45□□□□□ -0.42
RTN4R-203ENST00000425986 IGHV3-30-5P0DP03 117 aa12.45□□□□□ -0.42
RTN4R-203ENST00000425986 SS18Q15532 418 aa12.45□□□□□ -0.42
RTN4R-203ENST00000425986 NDUFA1O15239 70 aa12.44□□□□□ -0.42
RTN4R-203ENST00000425986 RAB37Q96AX2 223 aa12.44□□□□□ -0.42
RTN4R-203ENST00000425986 DNHD1Q96M86 4753 aa12.44□□□□□ -0.42
RTN4R-203ENST00000425986 TMEM238C9JI98 176 aa12.43□□□□□ -0.42
RTN4R-203ENST00000425986 LINC00269Q8N2A0 174 aa12.43□□□□□ -0.42
RTN4R-203ENST00000425986 C9orf118A6NHY6 69 aa12.43□□□□□ -0.42
RTN4R-203ENST00000425986 Q8N3U1 123 aa12.43□□□□□ -0.42
RTN4R-203ENST00000425986 TMEM238LA0A1B0GVL6 79 aa12.42□□□□□ -0.42
RTN4R-203ENST00000425986 A6NJY4 79 aa12.42□□□□□ -0.42
RTN4R-203ENST00000425986 ANGP03950 147 aaKnown RBP12.42□□□□□ -0.42
RTN4R-203ENST00000425986 A0A087WZ39 114 aa12.41□□□□□ -0.42
RTN4R-203ENST00000425986 A0A1B0GWB2 263 aa12.41□□□□□ -0.42
RTN4R-203ENST00000425986 K7ERJ3 54 aa12.41□□□□□ -0.42
RTN4R-203ENST00000425986 CLPSL2Q6UWE3 100 aa12.41□□□□□ -0.42
RTN4R-203ENST00000425986 LITAFQ99732 161 aa12.41□□□□□ -0.42
RTN4R-203ENST00000425986 C5orf38Q86SI9 138 aa12.4□□□□□ -0.42
RTN4R-203ENST00000425986 Q9H8V8 135 aa12.4□□□□□ -0.42
RTN4R-203ENST00000425986 XCL1P47992 114 aa12.39□□□□□ -0.43
RTN4R-203ENST00000425986 REG3AQ06141 175 aa12.39□□□□□ -0.43
RTN4R-203ENST00000425986 TIMM17BO60830 172 aa12.39□□□□□ -0.43
RTN4R-203ENST00000425986 H3BUT2 72 aa12.38□□□□□ -0.43
RTN4R-203ENST00000425986 ADAMTSL4-AS1Q5T5F5 129 aa12.38□□□□□ -0.43
RTN4R-203ENST00000425986 MUSTN1Q8IVN3 82 aa12.38□□□□□ -0.43
RTN4R-203ENST00000425986 ZNF625Q96I27 306 aaPredicted RBP12.38□□□□□ -0.43
RTN4R-203ENST00000425986 COX7B2Q8TF08 81 aa12.38□□□□□ -0.43
RTN4R-203ENST00000425986 SPANXDQ9BXN6 97 aa12.37□□□□□ -0.43
RTN4R-203ENST00000425986 SPANXCQ9NY87 97 aa12.37□□□□□ -0.43
RTN4R-203ENST00000425986 TRAV10A0A0B4J240 114 aa12.36□□□□□ -0.43
RTN4R-203ENST00000425986 CIRBPQ14011 172 aaKnown RBP12.36□□□□□ -0.43
RTN4R-203ENST00000425986 ESRGQ1W209 222 aa12.36□□□□□ -0.43
RTN4R-203ENST00000425986 NAA38Q9BRA0 125 aaKnown RBP12.36□□□□□ -0.43
RTN4R-203ENST00000425986 PRSS2P07478 247 aa12.36□□□□□ -0.43
RTN4R-203ENST00000425986 HERV-K104P63124 156 aa12.36□□□□□ -0.43
RTN4R-203ENST00000425986 RPL24P83731 157 aaKnown RBP12.36□□□□□ -0.43
RTN4R-203ENST00000425986 CD164L2Q6UWJ8 174 aa12.36□□□□□ -0.43
RTN4R-203ENST00000425986 CHCHD10Q8WYQ3 142 aaPredicted RBP12.36□□□□□ -0.43
RTN4R-203ENST00000425986 LINC01561Q8N1V8 128 aa12.35□□□□□ -0.43
RTN4R-203ENST00000425986 TOMM7Q9P0U1 55 aa12.35□□□□□ -0.43
RTN4R-203ENST00000425986 HUWE1Q7Z6Z7 4374 aaKnown RBP12.35□□□□□ -0.43
RTN4R-203ENST00000425986 MIAQ16674 131 aa12.34□□□□□ -0.43
RTN4R-203ENST00000425986 GTF2H5Q6ZYL4 71 aa12.34□□□□□ -0.43
RTN4R-203ENST00000425986 PRR34Q9NV39 138 aa12.34□□□□□ -0.43
RTN4R-203ENST00000425986 KLK12Q9UKR0 248 aa12.34□□□□□ -0.43
RTN4R-203ENST00000425986 A4D1N5 150 aa12.34□□□□□ -0.43
RTN4R-203ENST00000425986 IGLL5B9A064 214 aa12.34□□□□□ -0.43
RTN4R-203ENST00000425986 IGLV10-54A0A075B6I4 117 aa12.33□□□□□ -0.44
RTN4R-203ENST00000425986 APOMO95445 188 aa12.33□□□□□ -0.44
RTN4R-203ENST00000425986 CFC1BP0CG36 223 aa12.33□□□□□ -0.44
RTN4R-203ENST00000425986 CFC1P0CG37 223 aa12.33□□□□□ -0.44
RTN4R-203ENST00000425986 WFDC10BQ8IUB3 73 aa12.33□□□□□ -0.44
RTN4R-203ENST00000425986 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
RTN4R-203ENST00000425986 K7EP34 96 aa12.32□□□□□ -0.44
RTN4R-203ENST00000425986 IGHV3-33P01772 117 aa12.32□□□□□ -0.44
RTN4R-203ENST00000425986 GAGE10A6NGK3 116 aa12.32□□□□□ -0.44
RTN4R-203ENST00000425986 COX7A2LO14548 114 aa12.31□□□□□ -0.44
RTN4R-203ENST00000425986 IFITM1P13164 125 aa12.31□□□□□ -0.44
RTN4R-203ENST00000425986 ENHOQ6UWT2 76 aa12.31□□□□□ -0.44
RTN4R-203ENST00000425986 C15orf53Q8NAA6 179 aa12.3□□□□□ -0.44
RTN4R-203ENST00000425986 OCIAD2Q56VL3 154 aa12.3□□□□□ -0.44
RTN4R-203ENST00000425986 C6orf226Q5I0X4 101 aa12.3□□□□□ -0.44
RTN4R-203ENST00000425986 MEIG1Q5JSS6 88 aa12.3□□□□□ -0.44
RTN4R-203ENST00000425986 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.29□□□□□ -0.44
RTN4R-203ENST00000425986 FABP2P12104 132 aa12.29□□□□□ -0.44
RTN4R-203ENST00000425986 FOXI1Q12951 378 aa12.29□□□□□ -0.44
RTN4R-203ENST00000425986 DAND5Q8N907 189 aa12.29□□□□□ -0.44
RTN4R-203ENST00000425986 B9D2Q9BPU9 175 aa12.29□□□□□ -0.44
RTN4R-203ENST00000425986 PGPEP1Q9NXJ5 209 aa12.29□□□□□ -0.44
RTN4R-203ENST00000425986 A0A0U1RRA0 63 aa12.28□□□□□ -0.44
RTN4R-203ENST00000425986 NPC2P61916 151 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms