RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 GEMIN7Q9H840 131 aaKnown RBP15.94■□□□□ 0.14
APOE-202ENST00000425718 NUPR1O60356 82 aa15.93■□□□□ 0.14
APOE-202ENST00000425718 MALP21145 153 aa15.93■□□□□ 0.14
APOE-202ENST00000425718 LINC00242Q5T6M2 205 aa15.93■□□□□ 0.14
APOE-202ENST00000425718 TRAV12-1A0A0B4J245 112 aa15.92■□□□□ 0.14
APOE-202ENST00000425718 IGHV1-58A0A0C4DH39 117 aa15.92■□□□□ 0.14
APOE-202ENST00000425718 IGHV3OR16-9A0A0B4J2B5 98 aa15.91■□□□□ 0.14
APOE-202ENST00000425718 TINCRA0A1B0GVN0 87 aa15.91■□□□□ 0.14
APOE-202ENST00000425718 USP17L23D6RBM5 183 aa15.91■□□□□ 0.14
APOE-202ENST00000425718 LINC01561Q8N1V8 128 aa15.91■□□□□ 0.14
APOE-202ENST00000425718 NTN5Q8WTR8 489 aaPredicted RBP15.91■□□□□ 0.14
APOE-202ENST00000425718 ZC2HC1BQ5TFG8 222 aa15.9■□□□□ 0.14
APOE-202ENST00000425718 Q8N814 137 aa15.9■□□□□ 0.14
APOE-202ENST00000425718 MAP1LC3CQ9BXW4 147 aa15.89■□□□□ 0.13
APOE-202ENST00000425718 FABP4P15090 132 aa15.88■□□□□ 0.13
APOE-202ENST00000425718 CDPF1Q6NVV7 123 aa15.88■□□□□ 0.13
APOE-202ENST00000425718 PGPEP1Q9NXJ5 209 aa15.88■□□□□ 0.13
APOE-202ENST00000425718 A0A087WZ39 114 aa15.87■□□□□ 0.13
APOE-202ENST00000425718 A0A0J9YXV3 536 aa15.86■□□□□ 0.13
APOE-202ENST00000425718 LECT2O14960 151 aa15.86■□□□□ 0.13
APOE-202ENST00000425718 IGLC3P0DOY3 106 aa15.86■□□□□ 0.13
APOE-202ENST00000425718 C5orf38Q86SI9 138 aa15.86■□□□□ 0.13
APOE-202ENST00000425718 CHTOPQ9Y3Y2 248 aaKnown RBP15.86■□□□□ 0.13
APOE-202ENST00000425718 FAT2Q9NYQ8 4349 aa15.86■□□□□ 0.13
APOE-202ENST00000425718 H3BRM9 83 aa15.85■□□□□ 0.13
APOE-202ENST00000425718 OR10D4PQ8NGN7 298 aa15.84■□□□□ 0.13
APOE-202ENST00000425718 IGLV5-45A0A087WSX0 123 aa15.83■□□□□ 0.12
APOE-202ENST00000425718 GVQW2A0A096LPI5 108 aaPredicted RBP15.83■□□□□ 0.12
APOE-202ENST00000425718 A0A1B0GVY2 172 aa15.83■□□□□ 0.12
APOE-202ENST00000425718 hDV102S1A0JD36 115 aa15.83■□□□□ 0.12
APOE-202ENST00000425718 F8VRH5 84 aa15.83■□□□□ 0.12
APOE-202ENST00000425718 S100A2P29034 98 aa15.83■□□□□ 0.12
APOE-202ENST00000425718 COX6A2Q02221 97 aa15.83■□□□□ 0.12
APOE-202ENST00000425718 WFDC2Q14508 124 aa15.83■□□□□ 0.12
APOE-202ENST00000425718 LINC00469Q8N7U9 141 aa15.83■□□□□ 0.12
APOE-202ENST00000425718 C15orf56Q8N910 161 aa15.83■□□□□ 0.12
APOE-202ENST00000425718 CHAC1Q9BUX1 264 aa15.83■□□□□ 0.12
APOE-202ENST00000425718 ZNF561-AS1K7EIQ3 104 aa15.82■□□□□ 0.12
APOE-202ENST00000425718 SPATA12Q7Z6I5 190 aa15.82■□□□□ 0.12
APOE-202ENST00000425718 IGHV3-64A0A075B6Q5 118 aa15.81■□□□□ 0.12
APOE-202ENST00000425718 F8WDY8 70 aa15.81■□□□□ 0.12
APOE-202ENST00000425718 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.8■□□□□ 0.12
APOE-202ENST00000425718 CDKN2A-AS1Q9UH64 79 aa15.8■□□□□ 0.12
APOE-202ENST00000425718 ORAOV1Q8WV07 137 aa15.79■□□□□ 0.12
APOE-202ENST00000425718 IGLV4-69A0A075B6H9 119 aa15.78■□□□□ 0.12
APOE-202ENST00000425718 IGLV5-52A0A0A0MRZ9 124 aa15.78■□□□□ 0.12
APOE-202ENST00000425718 H0Y8G0 127 aa15.78■□□□□ 0.12
APOE-202ENST00000425718 PLNP26678 52 aa15.78■□□□□ 0.12
APOE-202ENST00000425718 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.77■□□□□ 0.12
APOE-202ENST00000425718 CNBPP62633 177 aaKnown RBP15.77■□□□□ 0.12
APOE-202ENST00000425718 ODF1Q14990 250 aa15.77■□□□□ 0.12
APOE-202ENST00000425718 PET117Q6UWS5 81 aa15.77■□□□□ 0.12
APOE-202ENST00000425718 HIST3H2BBQ8N257 126 aa15.77■□□□□ 0.12
APOE-202ENST00000425718 C2orf48Q96LS8 159 aa15.77■□□□□ 0.12
APOE-202ENST00000425718 MRPL35Q9NZE8 188 aaKnown RBP15.77■□□□□ 0.12
APOE-202ENST00000425718 SYS1-DBNDD2H3BUS1 97 aa15.76■□□□□ 0.11
APOE-202ENST00000425718 AKR1D1P51857 326 aa15.76■□□□□ 0.11
APOE-202ENST00000425718 SPAG11BQ08648 103 aa15.76■□□□□ 0.11
APOE-202ENST00000425718 HIGD2BQ4VC39 106 aa15.76■□□□□ 0.11
APOE-202ENST00000425718 PKIGQ9Y2B9 76 aa15.76■□□□□ 0.11
APOE-202ENST00000425718 PRSS2P07478 247 aa15.75■□□□□ 0.11
APOE-202ENST00000425718 C11orf86A6NJI1 115 aa15.74■□□□□ 0.11
APOE-202ENST00000425718 ZNF22P17026 224 aaPredicted RBP15.74■□□□□ 0.11
APOE-202ENST00000425718 TMEM170BQ5T4T1 132 aa15.74■□□□□ 0.11
APOE-202ENST00000425718 C20orf202A1L168 122 aa15.73■□□□□ 0.11
APOE-202ENST00000425718 DPM2O94777 84 aa15.73■□□□□ 0.11
APOE-202ENST00000425718 KRTAP10-2P60368 255 aa15.73■□□□□ 0.11
APOE-202ENST00000425718 SNRPEP62304 92 aaKnown RBP15.73■□□□□ 0.11
APOE-202ENST00000425718 C5orf52A6NGY3 159 aa15.72■□□□□ 0.11
APOE-202ENST00000425718 Q8IZM0 81 aa15.72■□□□□ 0.11
APOE-202ENST00000425718 PKD1P98161 4303 aa15.72■□□□□ 0.11
APOE-202ENST00000425718 HECTD4Q9Y4D8 3996 aa15.72■□□□□ 0.11
APOE-202ENST00000425718 C16orf90A8MZG2 172 aa15.7■□□□□ 0.1
APOE-202ENST00000425718 SMIM1B2RUZ4 78 aa15.7■□□□□ 0.1
APOE-202ENST00000425718 NDUFA1O15239 70 aa15.7■□□□□ 0.1
APOE-202ENST00000425718 IGKCP01834 107 aa15.7■□□□□ 0.1
APOE-202ENST00000425718 C3orf79P0CE67 100 aa15.7■□□□□ 0.1
APOE-202ENST00000425718 CXCL5P42830 114 aa15.7■□□□□ 0.1
APOE-202ENST00000425718 KRTDAPP60985 99 aa15.7■□□□□ 0.1
APOE-202ENST00000425718 CAMK2N2Q96S95 79 aa15.7■□□□□ 0.1
APOE-202ENST00000425718 HIST1H2BLQ99880 126 aa15.7■□□□□ 0.1
APOE-202ENST00000425718 GCSHP23434 173 aa15.69■□□□□ 0.1
APOE-202ENST00000425718 SYCNQ0VAF6 134 aa15.69■□□□□ 0.1
APOE-202ENST00000425718 C6orf226Q5I0X4 101 aa15.69■□□□□ 0.1
APOE-202ENST00000425718 LINC01545Q5VT33 79 aa15.69■□□□□ 0.1
APOE-202ENST00000425718 CARD19Q96LW7 228 aa15.69■□□□□ 0.1
APOE-202ENST00000425718 DNAH11Q96DT5 4516 aa15.68■□□□□ 0.1
APOE-202ENST00000425718 C9orf163Q8N9P6 203 aa15.68■□□□□ 0.1
APOE-202ENST00000425718 TOMM7Q9P0U1 55 aa15.68■□□□□ 0.1
APOE-202ENST00000425718 SPINK8P0C7L1 97 aa15.67■□□□□ 0.1
APOE-202ENST00000425718 HERVK_113P61574 105 aa15.67■□□□□ 0.1
APOE-202ENST00000425718 CKS1BP61024 79 aa15.66■□□□□ 0.1
APOE-202ENST00000425718 SFTA2Q6UW10 78 aa15.66■□□□□ 0.1
APOE-202ENST00000425718 COX7B2Q8TF08 81 aa15.66■□□□□ 0.1
APOE-202ENST00000425718 IGLV5-39A0A0G2JS06 123 aa15.65■□□□□ 0.1
APOE-202ENST00000425718 KIAA0087Q14695 138 aa15.65■□□□□ 0.1
APOE-202ENST00000425718 RNF151Q2KHN1 245 aa15.65■□□□□ 0.1
APOE-202ENST00000425718 TMEM223A0PJW6 202 aa15.64■□□□□ 0.09
APOE-202ENST00000425718 TRBV30A0A0K0K1B3 111 aa15.63■□□□□ 0.09
APOE-202ENST00000425718 LINC00526Q96FQ7 95 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms