RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 GAGE2DQ9UEU5 116 aa7.46□□□□□ -1.22
HLA-DQB3-203ENST00000425319 S100A8P05109 93 aa7.45□□□□□ -1.22
HLA-DQB3-203ENST00000425319 TLX1NBP0CAT3 122 aa7.45□□□□□ -1.22
HLA-DQB3-203ENST00000425319 FAM19A5Q7Z5A7 132 aaPredicted RBP7.45□□□□□ -1.22
HLA-DQB3-203ENST00000425319 SPANXA1Q9NS26 97 aa7.45□□□□□ -1.22
HLA-DQB3-203ENST00000425319 NAT8BQ9UHF3 227 aa7.45□□□□□ -1.22
HLA-DQB3-203ENST00000425319 CARHSP1Q9Y2V2 147 aaKnown RBP7.45□□□□□ -1.22
HLA-DQB3-203ENST00000425319 LRP2P98164 4655 aa7.44□□□□□ -1.22
HLA-DQB3-203ENST00000425319 A0A1B0GW15 77 aa7.44□□□□□ -1.22
HLA-DQB3-203ENST00000425319 RAB5AP20339 215 aa7.44□□□□□ -1.22
HLA-DQB3-203ENST00000425319 TNXBP22105 4242 aa7.44□□□□□ -1.22
HLA-DQB3-203ENST00000425319 IFITM10A6NMD0 228 aa7.43□□□□□ -1.22
HLA-DQB3-203ENST00000425319 F8W036 122 aa7.43□□□□□ -1.22
HLA-DQB3-203ENST00000425319 SMKR1H3BMG3 65 aa7.43□□□□□ -1.22
HLA-DQB3-203ENST00000425319 IFI27P40305 119 aaPredicted RBP7.43□□□□□ -1.22
HLA-DQB3-203ENST00000425319 Q6ZUT4 128 aa7.43□□□□□ -1.22
HLA-DQB3-203ENST00000425319 TRBV30A0A0K0K1B3 111 aa7.42□□□□□ -1.22
HLA-DQB3-203ENST00000425319 M0QXV9 152 aa7.42□□□□□ -1.22
HLA-DQB3-203ENST00000425319 PRSS2P07478 247 aa7.42□□□□□ -1.22
HLA-DQB3-203ENST00000425319 MRPS36P82909 103 aaKnown RBP7.42□□□□□ -1.22
HLA-DQB3-203ENST00000425319 LBHQ53QV2 105 aaPredicted RBP7.42□□□□□ -1.22
HLA-DQB3-203ENST00000425319 FAM104BQ5XKR9 115 aa7.42□□□□□ -1.22
HLA-DQB3-203ENST00000425319 UNQ6190/PRO20217Q6UXQ8 127 aa7.42□□□□□ -1.22
HLA-DQB3-203ENST00000425319 LINC01551Q86U37 167 aa7.42□□□□□ -1.22
HLA-DQB3-203ENST00000425319 TRBV24-1A0A075B6N3 115 aa7.41□□□□□ -1.22
HLA-DQB3-203ENST00000425319 IGHV3OR16-9A0A0B4J2B5 98 aa7.41□□□□□ -1.22
HLA-DQB3-203ENST00000425319 RPL32P62910 135 aaKnown RBP7.41□□□□□ -1.22
HLA-DQB3-203ENST00000425319 FAM74A3Q4VXF1 159 aa7.41□□□□□ -1.22
HLA-DQB3-203ENST00000425319 NRACQ8N912 160 aa7.41□□□□□ -1.22
HLA-DQB3-203ENST00000425319 SMDT1Q9H4I9 107 aa7.41□□□□□ -1.22
HLA-DQB3-203ENST00000425319 NUPR1O60356 82 aa7.4□□□□□ -1.22
HLA-DQB3-203ENST00000425319 PPBPP02775 128 aa7.4□□□□□ -1.22
HLA-DQB3-203ENST00000425319 MRPL51Q4U2R6 128 aaKnown RBP7.4□□□□□ -1.22
HLA-DQB3-203ENST00000425319 FAM168BA1KXE4 195 aa7.39□□□□□ -1.23
HLA-DQB3-203ENST00000425319 NDUFC2-KCTD14E9PQ53 114 aa7.39□□□□□ -1.23
HLA-DQB3-203ENST00000425319 TNFRSF6BO95407 300 aa7.39□□□□□ -1.23
HLA-DQB3-203ENST00000425319 CKS1BP61024 79 aa7.39□□□□□ -1.23
HLA-DQB3-203ENST00000425319 C2orf88Q9BSF0 95 aa7.39□□□□□ -1.23
HLA-DQB3-203ENST00000425319 C6orf48Q9UBA6 75 aa7.39□□□□□ -1.23
HLA-DQB3-203ENST00000425319 ZNF861PO60384 105 aa7.38□□□□□ -1.23
HLA-DQB3-203ENST00000425319 RPL39P62891 51 aaKnown RBP7.38□□□□□ -1.23
HLA-DQB3-203ENST00000425319 C6orf226Q5I0X4 101 aa7.38□□□□□ -1.23
HLA-DQB3-203ENST00000425319 ALKAL2Q6UX46 152 aa7.38□□□□□ -1.23
HLA-DQB3-203ENST00000425319 Q6ZN92 141 aa7.38□□□□□ -1.23
HLA-DQB3-203ENST00000425319 V9GYV3 84 aa7.38□□□□□ -1.23
HLA-DQB3-203ENST00000425319 RPL28P46779 137 aaKnown RBP7.37□□□□□ -1.23
HLA-DQB3-203ENST00000425319 C10orf25Q5T742 122 aa7.37□□□□□ -1.23
HLA-DQB3-203ENST00000425319 TEX43Q6ZNM6 134 aa7.37□□□□□ -1.23
HLA-DQB3-203ENST00000425319 LINC01561Q8N1V8 128 aa7.37□□□□□ -1.23
HLA-DQB3-203ENST00000425319 SMIM2Q9BVW6 85 aa7.37□□□□□ -1.23
HLA-DQB3-203ENST00000425319 TSPAN13O95857 204 aa7.36□□□□□ -1.23
HLA-DQB3-203ENST00000425319 ADIRFQ15847 76 aa7.36□□□□□ -1.23
HLA-DQB3-203ENST00000425319 TMEM141Q96I45 108 aa7.36□□□□□ -1.23
HLA-DQB3-203ENST00000425319 PYGO1Q9Y3Y4 419 aa7.36□□□□□ -1.23
HLA-DQB3-203ENST00000425319 CRYGAP11844 174 aa7.35□□□□□ -1.23
HLA-DQB3-203ENST00000425319 SEC11AP67812 179 aa7.35□□□□□ -1.23
HLA-DQB3-203ENST00000425319 TYMSOSQ8TAI1 123 aa7.35□□□□□ -1.23
HLA-DQB3-203ENST00000425319 VCX2Q9H322 139 aa7.35□□□□□ -1.23
HLA-DQB3-203ENST00000425319 TOMM7Q9P0U1 55 aa7.35□□□□□ -1.23
HLA-DQB3-203ENST00000425319 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
HLA-DQB3-203ENST00000425319 SMIM27A0A1W2PRY6 76 aa7.34□□□□□ -1.23
HLA-DQB3-203ENST00000425319 D6R8Y8 96 aa7.34□□□□□ -1.23
HLA-DQB3-203ENST00000425319 SRP19P09132 144 aaKnown RBP7.34□□□□□ -1.23
HLA-DQB3-203ENST00000425319 KRTAP1-4P0C5Y4 121 aa7.34□□□□□ -1.23
HLA-DQB3-203ENST00000425319 G0S2P27469 103 aa7.34□□□□□ -1.23
HLA-DQB3-203ENST00000425319 PAPPA-AS1Q5QFB9 102 aa7.34□□□□□ -1.23
HLA-DQB3-203ENST00000425319 ORMDL3Q8N138 153 aa7.34□□□□□ -1.23
HLA-DQB3-203ENST00000425319 TMEM136Q6ZRR5 245 aa7.33□□□□□ -1.24
HLA-DQB3-203ENST00000425319 ALKBH7Q9BT30 221 aaPredicted RBP7.33□□□□□ -1.24
HLA-DQB3-203ENST00000425319 CTDSP1Q9GZU7 261 aa7.33□□□□□ -1.24
HLA-DQB3-203ENST00000425319 C22orf24Q9Y442 160 aa7.33□□□□□ -1.24
HLA-DQB3-203ENST00000425319 RPL23P62829 140 aaKnown RBP7.32□□□□□ -1.24
HLA-DQB3-203ENST00000425319 IFITM2Q01629 132 aa7.32□□□□□ -1.24
HLA-DQB3-203ENST00000425319 KIAA0087Q14695 138 aa7.32□□□□□ -1.24
HLA-DQB3-203ENST00000425319 PEA15Q15121 130 aa7.32□□□□□ -1.24
HLA-DQB3-203ENST00000425319 LINC00242Q5T6M2 205 aa7.32□□□□□ -1.24
HLA-DQB3-203ENST00000425319 C2orf82Q6UX34 121 aa7.32□□□□□ -1.24
HLA-DQB3-203ENST00000425319 CYSLTR1Q9Y271 337 aa7.32□□□□□ -1.24
HLA-DQB3-203ENST00000425319 NPYP01303 97 aa7.31□□□□□ -1.24
HLA-DQB3-203ENST00000425319 MRPL54Q6P161 138 aaKnown RBP7.31□□□□□ -1.24
HLA-DQB3-203ENST00000425319 KRTAP11-1Q8IUC1 163 aa7.31□□□□□ -1.24
HLA-DQB3-203ENST00000425319 PRELID3AQ96N28 172 aa7.31□□□□□ -1.24
HLA-DQB3-203ENST00000425319 LAMTOR2Q9Y2Q5 125 aa7.31□□□□□ -1.24
HLA-DQB3-203ENST00000425319 C9orf129Q5T035 196 aaKnown RBP7.3□□□□□ -1.24
HLA-DQB3-203ENST00000425319 MRPL55Q7Z7F7 128 aaKnown RBP7.3□□□□□ -1.24
HLA-DQB3-203ENST00000425319 MAP1LC3AQ9H492 121 aa7.3□□□□□ -1.24
HLA-DQB3-203ENST00000425319 GEMIN7Q9H840 131 aaKnown RBP7.3□□□□□ -1.24
HLA-DQB3-203ENST00000425319 TP73-AS1Q9UF72 201 aa7.3□□□□□ -1.24
HLA-DQB3-203ENST00000425319 IGLV4-3A0A075B6K6 122 aa7.29□□□□□ -1.24
HLA-DQB3-203ENST00000425319 NPSP0C0P6 89 aa7.29□□□□□ -1.24
HLA-DQB3-203ENST00000425319 CXCL5P42830 114 aa7.29□□□□□ -1.24
HLA-DQB3-203ENST00000425319 HERVK_113P63121 156 aa7.29□□□□□ -1.24
HLA-DQB3-203ENST00000425319 ORMDL2Q53FV1 153 aa7.29□□□□□ -1.24
HLA-DQB3-203ENST00000425319 Q8IZM0 81 aa7.29□□□□□ -1.24
HLA-DQB3-203ENST00000425319 LINC00469Q8N7U9 141 aa7.29□□□□□ -1.24
HLA-DQB3-203ENST00000425319 LOC389332A0A1B0GUA5 103 aa7.28□□□□□ -1.24
HLA-DQB3-203ENST00000425319 F8VRH5 84 aa7.28□□□□□ -1.24
HLA-DQB3-203ENST00000425319 K7EMI3 77 aa7.28□□□□□ -1.24
HLA-DQB3-203ENST00000425319 BCE1O60756 84 aa7.28□□□□□ -1.24
HLA-DQB3-203ENST00000425319 UBE2AP49459 152 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms