RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 IGHV3-38A0A0C4DH36 116 aa4.81□□□□□ -1.64
EPHA4-206ENST00000424339 SIVA1O15304 175 aa4.81□□□□□ -1.64
EPHA4-206ENST00000424339 CCL25O15444 150 aa4.81□□□□□ -1.64
EPHA4-206ENST00000424339 DNAH10OSP0CZ25 163 aa4.81□□□□□ -1.64
EPHA4-206ENST00000424339 SEC11AP67812 179 aa4.81□□□□□ -1.64
EPHA4-206ENST00000424339 UBE2V1Q13404 147 aa4.81□□□□□ -1.64
EPHA4-206ENST00000424339 ORMDL2Q53FV1 153 aa4.81□□□□□ -1.64
EPHA4-206ENST00000424339 LINC01556Q5JQF7 62 aa4.81□□□□□ -1.64
EPHA4-206ENST00000424339 A0A087WX48 190 aa4.8□□□□□ -1.64
EPHA4-206ENST00000424339 LCE6AA0A183 80 aa4.8□□□□□ -1.64
EPHA4-206ENST00000424339 A0A1B0GUV1 79 aa4.8□□□□□ -1.64
EPHA4-206ENST00000424339 GAGE10A6NGK3 116 aa4.8□□□□□ -1.64
EPHA4-206ENST00000424339 UBE2L6O14933 153 aa4.8□□□□□ -1.64
EPHA4-206ENST00000424339 ATP5LO75964 103 aa4.8□□□□□ -1.64
EPHA4-206ENST00000424339 PCP4P48539 62 aa4.8□□□□□ -1.64
EPHA4-206ENST00000424339 HSD52Q0P140 79 aa4.8□□□□□ -1.64
EPHA4-206ENST00000424339 Q6ZVH6 145 aa4.8□□□□□ -1.64
EPHA4-206ENST00000424339 CHCHD5Q9BSY4 110 aa4.8□□□□□ -1.64
EPHA4-206ENST00000424339 Q9H8V8 135 aa4.8□□□□□ -1.64
EPHA4-206ENST00000424339 DNAH7Q8WXX0 4024 aa4.8□□□□□ -1.64
EPHA4-206ENST00000424339 LY6G6CO95867 125 aa4.79□□□□□ -1.64
EPHA4-206ENST00000424339 TSHBP01222 138 aa4.79□□□□□ -1.64
EPHA4-206ENST00000424339 LAGE3Q14657 143 aa4.79□□□□□ -1.64
EPHA4-206ENST00000424339 NTM-AS1Q6ZSK4 140 aa4.79□□□□□ -1.64
EPHA4-206ENST00000424339 TIMM21Q9BVV7 248 aa4.79□□□□□ -1.64
EPHA4-206ENST00000424339 HIGD1BQ9P298 99 aa4.79□□□□□ -1.64
EPHA4-206ENST00000424339 CSDC2Q9Y534 153 aaKnown RBP4.79□□□□□ -1.64
EPHA4-206ENST00000424339 TRAV12-1A0A0B4J245 112 aa4.78□□□□□ -1.64
EPHA4-206ENST00000424339 DPM2O94777 84 aa4.78□□□□□ -1.64
EPHA4-206ENST00000424339 PAPPA-AS1Q5QFB9 102 aa4.78□□□□□ -1.64
EPHA4-206ENST00000424339 AMMECR1LQ6DCA0 310 aa4.78□□□□□ -1.64
EPHA4-206ENST00000424339 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.78□□□□□ -1.64
EPHA4-206ENST00000424339 WFDC10BQ8IUB3 73 aa4.78□□□□□ -1.64
EPHA4-206ENST00000424339 C20orf203Q8NBC4 194 aa4.78□□□□□ -1.64
EPHA4-206ENST00000424339 SPANXA1Q9NS26 97 aa4.78□□□□□ -1.64
EPHA4-206ENST00000424339 IGKV2D-26A0A0A0MRZ7 120 aa4.77□□□□□ -1.65
EPHA4-206ENST00000424339 TRAV8-3A0A0A6YYJ7 113 aa4.77□□□□□ -1.65
EPHA4-206ENST00000424339 NBDYA0A0U1RRE5 68 aa4.77□□□□□ -1.65
EPHA4-206ENST00000424339 TMEM262E9PQX1 116 aa4.77□□□□□ -1.65
EPHA4-206ENST00000424339 H3BRM9 83 aa4.77□□□□□ -1.65
EPHA4-206ENST00000424339 IGKCP01834 107 aa4.77□□□□□ -1.65
EPHA4-206ENST00000424339 NFE4Q86UQ8 179 aa4.77□□□□□ -1.65
EPHA4-206ENST00000424339 PCP2Q8IVA1 136 aa4.77□□□□□ -1.65
EPHA4-206ENST00000424339 TMEM101Q96IK0 257 aa4.77□□□□□ -1.65
EPHA4-206ENST00000424339 CYSLTR1Q9Y271 337 aa4.77□□□□□ -1.65
EPHA4-206ENST00000424339 A6NDN8 102 aa4.76□□□□□ -1.65
EPHA4-206ENST00000424339 IBA57-AS1B1ANH7 110 aa4.76□□□□□ -1.65
EPHA4-206ENST00000424339 TRIAP1O43715 76 aa4.76□□□□□ -1.65
EPHA4-206ENST00000424339 RBX1P62877 108 aa4.76□□□□□ -1.65
EPHA4-206ENST00000424339 VAMP3Q15836 100 aa4.76□□□□□ -1.65
EPHA4-206ENST00000424339 OR5A1Q8NGJ0 315 aa4.76□□□□□ -1.65
EPHA4-206ENST00000424339 TOMM6Q96B49 74 aa4.76□□□□□ -1.65
EPHA4-206ENST00000424339 RMI2Q96E14 147 aa4.76□□□□□ -1.65
EPHA4-206ENST00000424339 MRPL35Q9NZE8 188 aaKnown RBP4.76□□□□□ -1.65
EPHA4-206ENST00000424339 PYGO1Q9Y3Y4 419 aa4.76□□□□□ -1.65
EPHA4-206ENST00000424339 DYNC2H1Q8NCM8 4307 aaKnown RBP4.76□□□□□ -1.65
EPHA4-206ENST00000424339 TENM2Q9NT68 2774 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 TRAV8-4A0A0B4J246 113 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 F8VRH5 84 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 CRPP02741 224 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 ANGP03950 147 aaKnown RBP4.75□□□□□ -1.65
EPHA4-206ENST00000424339 PRSS1P07477 247 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 PLNP26678 52 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 NMUP48645 174 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 MRPS36P82909 103 aaKnown RBP4.75□□□□□ -1.65
EPHA4-206ENST00000424339 GAGE6Q13070 117 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 MIAQ16674 131 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 C2orf66Q6UXQ4 117 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 Q6ZR54 194 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 TIMM17AQ99595 171 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 PRR34Q9NV39 138 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 UBE2D4Q9Y2X8 147 aa4.75□□□□□ -1.65
EPHA4-206ENST00000424339 CSMD3Q7Z407 3707 aa4.74□□□□□ -1.65
EPHA4-206ENST00000424339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.74□□□□□ -1.65
EPHA4-206ENST00000424339 IGKV2-29A2NJV5 120 aaPredicted RBP4.74□□□□□ -1.65
EPHA4-206ENST00000424339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.74□□□□□ -1.65
EPHA4-206ENST00000424339 IGHV3-30P01768 117 aa4.74□□□□□ -1.65
EPHA4-206ENST00000424339 IGHV3-33P01772 117 aa4.74□□□□□ -1.65
EPHA4-206ENST00000424339 IGHV3-30-3P0DP02 117 aa4.74□□□□□ -1.65
EPHA4-206ENST00000424339 IGHV3-30-5P0DP03 117 aa4.74□□□□□ -1.65
EPHA4-206ENST00000424339 TAL2Q16559 108 aa4.74□□□□□ -1.65
EPHA4-206ENST00000424339 ZC2HC1BQ5TFG8 222 aa4.74□□□□□ -1.65
EPHA4-206ENST00000424339 ERASQ7Z444 233 aa4.74□□□□□ -1.65
EPHA4-206ENST00000424339 NTN5Q8WTR8 489 aaPredicted RBP4.74□□□□□ -1.65
EPHA4-206ENST00000424339 TMEM141Q96I45 108 aa4.74□□□□□ -1.65
EPHA4-206ENST00000424339 CHAC1Q9BUX1 264 aa4.74□□□□□ -1.65
EPHA4-206ENST00000424339 TM2D2Q9BX73 214 aa4.74□□□□□ -1.65
EPHA4-206ENST00000424339 STARD9Q9P2P6 4700 aa4.74□□□□□ -1.65
EPHA4-206ENST00000424339 K7EP34 96 aa4.73□□□□□ -1.65
EPHA4-206ENST00000424339 FXYD2P54710 66 aa4.73□□□□□ -1.65
EPHA4-206ENST00000424339 REG3AQ06141 175 aa4.73□□□□□ -1.65
EPHA4-206ENST00000424339 C1orf134Q5TEV5 83 aa4.73□□□□□ -1.65
EPHA4-206ENST00000424339 SCGB3A1Q96QR1 104 aa4.73□□□□□ -1.65
EPHA4-206ENST00000424339 TTTY13Q9BZ97 58 aa4.73□□□□□ -1.65
EPHA4-206ENST00000424339 CDC42SE2Q9NRR3 84 aa4.73□□□□□ -1.65
EPHA4-206ENST00000424339 KLK12Q9UKR0 248 aa4.73□□□□□ -1.65
EPHA4-206ENST00000424339 IGLV4-60A0A075B6I1 120 aa4.72□□□□□ -1.65
EPHA4-206ENST00000424339 IGIPA6NJ69 53 aa4.72□□□□□ -1.65
EPHA4-206ENST00000424339 RPL39P62891 51 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms