RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 LINC00959A0A1B0GUT2 108 aa9.7□□□□□ -0.86
USB1-202ENST00000423271 CHTF8P0CG12 524 aa9.7□□□□□ -0.86
USB1-202ENST00000423271 C2orf66Q6UXQ4 117 aa9.7□□□□□ -0.86
USB1-202ENST00000423271 IGHV3-64A0A075B6Q5 118 aa9.69□□□□□ -0.86
USB1-202ENST00000423271 HNRNPA3P51991 378 aaKnown RBP9.69□□□□□ -0.86
USB1-202ENST00000423271 CIRBPQ14011 172 aaKnown RBP9.69□□□□□ -0.86
USB1-202ENST00000423271 HIGD2BQ4VC39 106 aa9.69□□□□□ -0.86
USB1-202ENST00000423271 C18orf32Q8TCD1 76 aa9.69□□□□□ -0.86
USB1-202ENST00000423271 CYSLTR1Q9Y271 337 aa9.69□□□□□ -0.86
USB1-202ENST00000423271 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.68□□□□□ -0.86
USB1-202ENST00000423271 LINC01546A6NGU7 62 aa9.68□□□□□ -0.86
USB1-202ENST00000423271 CCL25O15444 150 aa9.68□□□□□ -0.86
USB1-202ENST00000423271 SCO1O75880 301 aa9.68□□□□□ -0.86
USB1-202ENST00000423271 MRPS36P82909 103 aaKnown RBP9.68□□□□□ -0.86
USB1-202ENST00000423271 FA2HQ7L5A8 372 aa9.68□□□□□ -0.86
USB1-202ENST00000423271 PYGO1Q9Y3Y4 419 aa9.68□□□□□ -0.86
USB1-202ENST00000423271 IGLV4-3A0A075B6K6 122 aa9.67□□□□□ -0.86
USB1-202ENST00000423271 TRAV13-1A0A0B4J241 112 aa9.67□□□□□ -0.86
USB1-202ENST00000423271 XCL1P47992 114 aa9.67□□□□□ -0.86
USB1-202ENST00000423271 FOXI1Q12951 378 aa9.67□□□□□ -0.86
USB1-202ENST00000423271 SS18Q15532 418 aa9.67□□□□□ -0.86
USB1-202ENST00000423271 COLCA2A8K830 154 aa9.66□□□□□ -0.86
USB1-202ENST00000423271 CFAP161Q6P656 301 aa9.66□□□□□ -0.86
USB1-202ENST00000423271 URB1-AS1Q96HZ7 61 aa9.66□□□□□ -0.86
USB1-202ENST00000423271 GVQW2A0A096LPI5 108 aaPredicted RBP9.65□□□□□ -0.86
USB1-202ENST00000423271 C1orf196B1AJZ1 125 aa9.65□□□□□ -0.86
USB1-202ENST00000423271 SPACA4Q8TDM5 124 aa9.65□□□□□ -0.86
USB1-202ENST00000423271 TOMM6Q96B49 74 aa9.65□□□□□ -0.86
USB1-202ENST00000423271 TMEM141Q96I45 108 aa9.65□□□□□ -0.86
USB1-202ENST00000423271 A0A087WYN8 130 aa9.64□□□□□ -0.87
USB1-202ENST00000423271 IGIPA6NJ69 53 aa9.64□□□□□ -0.87
USB1-202ENST00000423271 IFITM10A6NMD0 228 aa9.64□□□□□ -0.87
USB1-202ENST00000423271 TRGC2P03986 189 aa9.64□□□□□ -0.87
USB1-202ENST00000423271 G0S2P27469 103 aa9.64□□□□□ -0.87
USB1-202ENST00000423271 LINC00614P0C842 121 aa9.63□□□□□ -0.87
USB1-202ENST00000423271 COX6A2Q02221 97 aa9.63□□□□□ -0.87
USB1-202ENST00000423271 ZC2HC1BQ5TFG8 222 aa9.63□□□□□ -0.87
USB1-202ENST00000423271 CD164L2Q6UWJ8 174 aa9.63□□□□□ -0.87
USB1-202ENST00000423271 DPH3Q96FX2 82 aa9.63□□□□□ -0.87
USB1-202ENST00000423271 OXTP01178 125 aa9.62□□□□□ -0.87
USB1-202ENST00000423271 LINC00173Q6ZV60 143 aa9.62□□□□□ -0.87
USB1-202ENST00000423271 LINC00526Q96FQ7 95 aa9.62□□□□□ -0.87
USB1-202ENST00000423271 TNXBP22105 4242 aa9.61□□□□□ -0.87
USB1-202ENST00000423271 NPSP0C0P6 89 aa9.61□□□□□ -0.87
USB1-202ENST00000423271 Q6ZN92 141 aa9.61□□□□□ -0.87
USB1-202ENST00000423271 TEX43Q6ZNM6 134 aa9.61□□□□□ -0.87
USB1-202ENST00000423271 SCGB3A1Q96QR1 104 aa9.61□□□□□ -0.87
USB1-202ENST00000423271 AMELXQ99217 191 aa9.61□□□□□ -0.87
USB1-202ENST00000423271 TIMM17AQ99595 171 aa9.61□□□□□ -0.87
USB1-202ENST00000423271 A0A096LNJ9 63 aa9.6□□□□□ -0.87
USB1-202ENST00000423271 IGKV2-24A0A0C4DH68 120 aa9.6□□□□□ -0.87
USB1-202ENST00000423271 RAB5BP61020 215 aa9.6□□□□□ -0.87
USB1-202ENST00000423271 ERASQ7Z444 233 aa9.6□□□□□ -0.87
USB1-202ENST00000423271 VCX2Q9H322 139 aa9.6□□□□□ -0.87
USB1-202ENST00000423271 PLAC8Q9NZF1 115 aa9.6□□□□□ -0.87
USB1-202ENST00000423271 IGHV1-58A0A0C4DH39 117 aa9.59□□□□□ -0.87
USB1-202ENST00000423271 COX7A2LO14548 114 aa9.59□□□□□ -0.87
USB1-202ENST00000423271 ATP6V1G1O75348 118 aa9.59□□□□□ -0.87
USB1-202ENST00000423271 PMCHL1Q16048 86 aa9.59□□□□□ -0.87
USB1-202ENST00000423271 MAJINQ3KP22 176 aa9.59□□□□□ -0.87
USB1-202ENST00000423271 C5orf38Q86SI9 138 aa9.59□□□□□ -0.87
USB1-202ENST00000423271 C2orf88Q9BSF0 95 aa9.59□□□□□ -0.87
USB1-202ENST00000423271 A0A096LNI7 61 aa9.58□□□□□ -0.88
USB1-202ENST00000423271 LINC01549A6NIU2 74 aa9.58□□□□□ -0.88
USB1-202ENST00000423271 HBDP02042 147 aa9.58□□□□□ -0.88
USB1-202ENST00000423271 UBE2D1P51668 147 aa9.58□□□□□ -0.88
USB1-202ENST00000423271 PAPPA-AS1Q5QFB9 102 aa9.58□□□□□ -0.88
USB1-202ENST00000423271 LINC00242Q5T6M2 205 aa9.58□□□□□ -0.88
USB1-202ENST00000423271 IGHV3OR16-9A0A0B4J2B5 98 aa9.57□□□□□ -0.88
USB1-202ENST00000423271 MALP21145 153 aa9.57□□□□□ -0.88
USB1-202ENST00000423271 CARD19Q96LW7 228 aa9.57□□□□□ -0.88
USB1-202ENST00000423271 UBR4Q5T4S7 5183 aa9.56□□□□□ -0.88
USB1-202ENST00000423271 S100A1P23297 94 aa9.56□□□□□ -0.88
USB1-202ENST00000423271 BAGE3Q86Y29 109 aa9.56□□□□□ -0.88
USB1-202ENST00000423271 CHCHD1Q96BP2 118 aaKnown RBP9.56□□□□□ -0.88
USB1-202ENST00000423271 PDZD11Q5EBL8 140 aa9.55□□□□□ -0.88
USB1-202ENST00000423271 STPG4Q8N801 248 aa9.55□□□□□ -0.88
USB1-202ENST00000423271 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.54□□□□□ -0.88
USB1-202ENST00000423271 A0A0J9YXV3 536 aa9.53□□□□□ -0.88
USB1-202ENST00000423271 ZNF561-AS1K7EIQ3 104 aa9.53□□□□□ -0.88
USB1-202ENST00000423271 SERF1AO75920 110 aa9.53□□□□□ -0.88
USB1-202ENST00000423271 LINC00310P59036 64 aa9.53□□□□□ -0.88
USB1-202ENST00000423271 SYCNQ0VAF6 134 aa9.53□□□□□ -0.88
USB1-202ENST00000423271 FAM19A3Q7Z5A8 133 aa9.53□□□□□ -0.88
USB1-202ENST00000423271 C7orf33Q8WU49 177 aa9.53□□□□□ -0.88
USB1-202ENST00000423271 IGLV4-69A0A075B6H9 119 aa9.52□□□□□ -0.89
USB1-202ENST00000423271 A0A087WZ39 114 aa9.52□□□□□ -0.89
USB1-202ENST00000423271 HSBP1O75506 76 aa9.52□□□□□ -0.89
USB1-202ENST00000423271 APOMO95445 188 aa9.52□□□□□ -0.89
USB1-202ENST00000423271 MT1HL1P0DM35 61 aa9.52□□□□□ -0.89
USB1-202ENST00000423271 PMVKQ15126 192 aa9.52□□□□□ -0.89
USB1-202ENST00000423271 Q6ZRU5 148 aa9.52□□□□□ -0.89
USB1-202ENST00000423271 CST9LQ9H4G1 147 aa9.52□□□□□ -0.89
USB1-202ENST00000423271 SERTAD4-AS1Q5TG53 156 aa9.51□□□□□ -0.89
USB1-202ENST00000423271 FAM19A2Q8N3H0 131 aa9.51□□□□□ -0.89
USB1-202ENST00000423271 ORAOV1Q8WV07 137 aa9.51□□□□□ -0.89
USB1-202ENST00000423271 ATP5LO75964 103 aa9.5□□□□□ -0.89
USB1-202ENST00000423271 SEC11AP67812 179 aa9.5□□□□□ -0.89
USB1-202ENST00000423271 PRR3P79522 188 aaKnown RBP9.5□□□□□ -0.89
USB1-202ENST00000423271 SPAG11BQ08648 103 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms