RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 ETDBQ3ZM63 59 aa9.7□□□□□ -0.86
CDCA3-202ENST00000422785 ADAMTSL4-AS1Q5T5F5 129 aa9.7□□□□□ -0.86
CDCA3-202ENST00000422785 LYRM7Q5U5X0 104 aa9.7□□□□□ -0.86
CDCA3-202ENST00000422785 TENM1Q9UKZ4 2725 aa9.7□□□□□ -0.86
CDCA3-202ENST00000422785 LOC107984156A0A0G2JMH3 177 aa9.7□□□□□ -0.86
CDCA3-202ENST00000422785 EIF4EBP3O60516 100 aaPredicted RBP9.7□□□□□ -0.86
CDCA3-202ENST00000422785 TIMM17BO60830 172 aa9.7□□□□□ -0.86
CDCA3-202ENST00000422785 ARL17AQ8IVW1 177 aa9.7□□□□□ -0.86
CDCA3-202ENST00000422785 MIAQ16674 131 aa9.69□□□□□ -0.86
CDCA3-202ENST00000422785 SMIM1B2RUZ4 78 aa9.69□□□□□ -0.86
CDCA3-202ENST00000422785 PRSS2P07478 247 aa9.69□□□□□ -0.86
CDCA3-202ENST00000422785 SFTA2Q6UW10 78 aa9.69□□□□□ -0.86
CDCA3-202ENST00000422785 IGHV3-33P01772 117 aa9.68□□□□□ -0.86
CDCA3-202ENST00000422785 PRO0461Q9UI25 63 aa9.68□□□□□ -0.86
CDCA3-202ENST00000422785 F5H768 121 aa9.68□□□□□ -0.86
CDCA3-202ENST00000422785 APOC4P55056 127 aa9.68□□□□□ -0.86
CDCA3-202ENST00000422785 GAGE6Q13070 117 aa9.68□□□□□ -0.86
CDCA3-202ENST00000422785 B5MCH6 92 aa9.67□□□□□ -0.86
CDCA3-202ENST00000422785 LYRM9A8MSI8 78 aa9.67□□□□□ -0.86
CDCA3-202ENST00000422785 PSMB2P49721 201 aa9.67□□□□□ -0.86
CDCA3-202ENST00000422785 WFDC9Q8NEX5 89 aa9.67□□□□□ -0.86
CDCA3-202ENST00000422785 SPATA25Q9BR10 227 aa9.67□□□□□ -0.86
CDCA3-202ENST00000422785 ERG28Q9UKR5 140 aa9.67□□□□□ -0.86
CDCA3-202ENST00000422785 CHCHD5Q9BSY4 110 aa9.66□□□□□ -0.86
CDCA3-202ENST00000422785 TRBV20-1A0A075B6N2 111 aa9.66□□□□□ -0.86
CDCA3-202ENST00000422785 GYPEP15421 78 aa9.66□□□□□ -0.86
CDCA3-202ENST00000422785 DEFB135Q30KP9 77 aa9.66□□□□□ -0.86
CDCA3-202ENST00000422785 Q9H8V8 135 aa9.66□□□□□ -0.86
CDCA3-202ENST00000422785 TEP1Q99973 2627 aaKnown RBP9.65□□□□□ -0.86
CDCA3-202ENST00000422785 IFITM1P13164 125 aa9.65□□□□□ -0.86
CDCA3-202ENST00000422785 CIRBPQ14011 172 aaKnown RBP9.65□□□□□ -0.86
CDCA3-202ENST00000422785 FAM222AQ5U5X8 452 aa9.65□□□□□ -0.86
CDCA3-202ENST00000422785 SMIM20Q8N5G0 67 aa9.65□□□□□ -0.86
CDCA3-202ENST00000422785 PRO0255Q9UI72 69 aa9.65□□□□□ -0.86
CDCA3-202ENST00000422785 ATRQ13535 2644 aa9.65□□□□□ -0.86
CDCA3-202ENST00000422785 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.86
CDCA3-202ENST00000422785 IGLV4-60A0A075B6I1 120 aa9.64□□□□□ -0.87
CDCA3-202ENST00000422785 MT-ATP8P03928 68 aa9.64□□□□□ -0.87
CDCA3-202ENST00000422785 WIPF1O43516 503 aa9.64□□□□□ -0.87
CDCA3-202ENST00000422785 TCL1BO95988 128 aa9.64□□□□□ -0.87
CDCA3-202ENST00000422785 SCGB1C2P0DMR2 95 aa9.63□□□□□ -0.87
CDCA3-202ENST00000422785 ZNF625Q96I27 306 aaPredicted RBP9.63□□□□□ -0.87
CDCA3-202ENST00000422785 J3QR89 54 aa9.63□□□□□ -0.87
CDCA3-202ENST00000422785 NBEAL2Q6ZNJ1 2754 aa9.62□□□□□ -0.87
CDCA3-202ENST00000422785 H7C2G1 150 aa9.62□□□□□ -0.87
CDCA3-202ENST00000422785 IGHV4-28A0A0C4DH34 117 aa9.62□□□□□ -0.87
CDCA3-202ENST00000422785 NPC2P61916 151 aa9.62□□□□□ -0.87
CDCA3-202ENST00000422785 Q1RN00 199 aa9.61□□□□□ -0.87
CDCA3-202ENST00000422785 PRIMA1Q86XR5 153 aa9.61□□□□□ -0.87
CDCA3-202ENST00000422785 DAND5Q8N907 189 aa9.61□□□□□ -0.87
CDCA3-202ENST00000422785 PAX4O43316 350 aa9.61□□□□□ -0.87
CDCA3-202ENST00000422785 DEFB4AO15263 64 aa9.6□□□□□ -0.87
CDCA3-202ENST00000422785 SMCPP49901 116 aaPredicted RBP9.6□□□□□ -0.87
CDCA3-202ENST00000422785 IGHV3OR16-9A0A0B4J2B5 98 aa9.6□□□□□ -0.87
CDCA3-202ENST00000422785 IGKV3OR2-268A0A0C4DH90 116 aa9.6□□□□□ -0.87
CDCA3-202ENST00000422785 MIFP14174 115 aa9.6□□□□□ -0.87
CDCA3-202ENST00000422785 LINC00308Q8TCZ7 52 aa9.6□□□□□ -0.87
CDCA3-202ENST00000422785 TRBV30A0A0K0K1B3 111 aa9.59□□□□□ -0.87
CDCA3-202ENST00000422785 A0A1B0GUV1 79 aa9.59□□□□□ -0.87
CDCA3-202ENST00000422785 Q8NAQ8 132 aa9.59□□□□□ -0.87
CDCA3-202ENST00000422785 COPS9Q8WXC6 57 aa9.59□□□□□ -0.87
CDCA3-202ENST00000422785 DAD1P61803 113 aa9.58□□□□□ -0.88
CDCA3-202ENST00000422785 COX7B2Q8TF08 81 aa9.58□□□□□ -0.88
CDCA3-202ENST00000422785 IGHV4-30-4P0DP06 118 aa9.58□□□□□ -0.88
CDCA3-202ENST00000422785 XGP55808 180 aa9.58□□□□□ -0.88
CDCA3-202ENST00000422785 MEIG1Q5JSS6 88 aa9.58□□□□□ -0.88
CDCA3-202ENST00000422785 ANAPC13Q9BS18 74 aa9.58□□□□□ -0.88
CDCA3-202ENST00000422785 LINC00959A0A1B0GUT2 108 aa9.58□□□□□ -0.88
CDCA3-202ENST00000422785 TMEM262E9PQX1 116 aa9.58□□□□□ -0.88
CDCA3-202ENST00000422785 CDIP1Q9H305 208 aa9.58□□□□□ -0.88
CDCA3-202ENST00000422785 A0A087WZ39 114 aa9.57□□□□□ -0.88
CDCA3-202ENST00000422785 TRIAP1O43715 76 aa9.57□□□□□ -0.88
CDCA3-202ENST00000422785 A0A096LPF7 62 aa9.56□□□□□ -0.88
CDCA3-202ENST00000422785 A0A0U1RRA0 63 aa9.56□□□□□ -0.88
CDCA3-202ENST00000422785 ATP5G1P05496 136 aa9.56□□□□□ -0.88
CDCA3-202ENST00000422785 PPDPFQ9H3Y8 114 aa9.56□□□□□ -0.88
CDCA3-202ENST00000422785 CELA1Q9UNI1 258 aa9.56□□□□□ -0.88
CDCA3-202ENST00000422785 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
CDCA3-202ENST00000422785 F8P00451 2351 aa9.55□□□□□ -0.88
CDCA3-202ENST00000422785 SPART-AS1P0CW21 52 aa9.55□□□□□ -0.88
CDCA3-202ENST00000422785 ATXN8Q156A1 80 aa9.55□□□□□ -0.88
CDCA3-202ENST00000422785 SOSTDC1Q6X4U4 206 aa9.55□□□□□ -0.88
CDCA3-202ENST00000422785 RPL13AP40429 203 aaKnown RBP9.54□□□□□ -0.88
CDCA3-202ENST00000422785 SS18Q15532 418 aa9.54□□□□□ -0.88
CDCA3-202ENST00000422785 TOMM7Q9P0U1 55 aa9.54□□□□□ -0.88
CDCA3-202ENST00000422785 TRRAPQ9Y4A5 3859 aa9.54□□□□□ -0.88
CDCA3-202ENST00000422785 COX6CP09669 75 aa9.53□□□□□ -0.88
CDCA3-202ENST00000422785 C5orf38Q86SI9 138 aa9.53□□□□□ -0.88
CDCA3-202ENST00000422785 M0QXV9 152 aa9.53□□□□□ -0.88
CDCA3-202ENST00000422785 TEN1Q86WV5 123 aa9.53□□□□□ -0.88
CDCA3-202ENST00000422785 FOXI1Q12951 378 aa9.52□□□□□ -0.88
CDCA3-202ENST00000422785 C9JAW5 83 aa9.52□□□□□ -0.89
CDCA3-202ENST00000422785 SLC25A20O43772 301 aa9.52□□□□□ -0.89
CDCA3-202ENST00000422785 CCDC179H3BU77 68 aa9.51□□□□□ -0.89
CDCA3-202ENST00000422785 XCL1P47992 114 aa9.51□□□□□ -0.89
CDCA3-202ENST00000422785 LINC01620Q4KN68 170 aa9.51□□□□□ -0.89
CDCA3-202ENST00000422785 NHLRC4P0CG21 123 aaPredicted RBP9.51□□□□□ -0.89
CDCA3-202ENST00000422785 MRPL23Q16540 153 aaKnown RBP9.5□□□□□ -0.89
CDCA3-202ENST00000422785 KRTAP24-1Q3LI83 254 aa9.5□□□□□ -0.89
CDCA3-202ENST00000422785 OXLD1Q5BKU9 147 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms