RNA–Protein interactions for RNA: ENST00000421127.6

CCDC17-202, Transcript of coiled-coil domain containing 17, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC17, Length 2,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-202ENST00000421127 SOSTDC1Q6X4U4 206 aa13.28□□□□□ -0.28
CCDC17-202ENST00000421127 PRIMA1Q86XR5 153 aa13.28□□□□□ -0.28
CCDC17-202ENST00000421127 Q8N2B8 174 aa13.28□□□□□ -0.28
CCDC17-202ENST00000421127 RPL36ALQ969Q0 106 aaKnown RBP13.28□□□□□ -0.28
CCDC17-202ENST00000421127 TRAV13-1A0A0B4J241 112 aa13.28□□□□□ -0.28
CCDC17-202ENST00000421127 ACYP1P07311 99 aa13.28□□□□□ -0.28
CCDC17-202ENST00000421127 TRBV7-7A0A0K0K1E9 115 aa13.27□□□□□ -0.28
CCDC17-202ENST00000421127 IL17DQ8TAD2 202 aa13.27□□□□□ -0.28
CCDC17-202ENST00000421127 OTOGQ6ZRI0 2925 aa13.27□□□□□ -0.29
CCDC17-202ENST00000421127 TRBV10-1A0A0K0K1A3 114 aa13.27□□□□□ -0.29
CCDC17-202ENST00000421127 K7EQD1 137 aa13.27□□□□□ -0.29
CCDC17-202ENST00000421127 NDUFA7O95182 113 aa13.27□□□□□ -0.29
CCDC17-202ENST00000421127 HERV-K104P63124 156 aa13.27□□□□□ -0.29
CCDC17-202ENST00000421127 DAZ2Q13117 558 aaKnown RBP13.27□□□□□ -0.29
CCDC17-202ENST00000421127 DAZ4Q86SG3 579 aaKnown RBP13.27□□□□□ -0.29
CCDC17-202ENST00000421127 DAZ3Q9NR90 486 aaKnown RBP13.27□□□□□ -0.29
CCDC17-202ENST00000421127 NF1P21359 2839 aa13.25□□□□□ -0.29
CCDC17-202ENST00000421127 TRACP01848 142 aa13.25□□□□□ -0.29
CCDC17-202ENST00000421127 C1orf158Q8N1D5 194 aa13.25□□□□□ -0.29
CCDC17-202ENST00000421127 MTORP42345 2549 aa13.25□□□□□ -0.29
CCDC17-202ENST00000421127 F5H768 121 aa13.24□□□□□ -0.29
CCDC17-202ENST00000421127 NTM-AS1Q6ZSK4 140 aa13.24□□□□□ -0.29
CCDC17-202ENST00000421127 STHQ8IWL8 128 aa13.24□□□□□ -0.29
CCDC17-202ENST00000421127 ODF3L2Q3SX64 289 aa13.24□□□□□ -0.29
CCDC17-202ENST00000421127 PPDPFQ9H3Y8 114 aa13.24□□□□□ -0.29
CCDC17-202ENST00000421127 CDC42SE2Q9NRR3 84 aa13.24□□□□□ -0.29
CCDC17-202ENST00000421127 FLNBO75369 2602 aaKnown RBP13.22□□□□□ -0.29
CCDC17-202ENST00000421127 Q6ZTI0 123 aa13.21□□□□□ -0.29
CCDC17-202ENST00000421127 TRAV25A0A0B4J276 109 aa13.2□□□□□ -0.3
CCDC17-202ENST00000421127 UBE2L6O14933 153 aa13.2□□□□□ -0.3
CCDC17-202ENST00000421127 BAALC-AS2P0C853 105 aa13.2□□□□□ -0.3
CCDC17-202ENST00000421127 IMUPQ9GZP8 106 aa13.2□□□□□ -0.3
CCDC17-202ENST00000421127 CHCHD5Q9BSY4 110 aa13.19□□□□□ -0.3
CCDC17-202ENST00000421127 TMEM243Q9BU79 118 aa13.19□□□□□ -0.3
CCDC17-202ENST00000421127 TRAV13-2A0A0B4J235 113 aa13.17□□□□□ -0.3
CCDC17-202ENST00000421127 PF4P02776 101 aa13.17□□□□□ -0.3
CCDC17-202ENST00000421127 HIST2H2BDQ6DRA6 164 aa13.17□□□□□ -0.3
CCDC17-202ENST00000421127 FAM222AQ5U5X8 452 aa13.17□□□□□ -0.3
CCDC17-202ENST00000421127 LINC00643Q86TS7 51 aa13.17□□□□□ -0.3
CCDC17-202ENST00000421127 FAM218AQ96MZ4 157 aa13.16□□□□□ -0.3
CCDC17-202ENST00000421127 CRPP02741 224 aa13.16□□□□□ -0.3
CCDC17-202ENST00000421127 SMCR5Q8TEV8 140 aa13.15□□□□□ -0.3
CCDC17-202ENST00000421127 RPL28P46779 137 aaKnown RBP13.15□□□□□ -0.31
CCDC17-202ENST00000421127 KRTAP1-1Q07627 177 aa13.15□□□□□ -0.31
CCDC17-202ENST00000421127 COX7B2Q8TF08 81 aa13.15□□□□□ -0.31
CCDC17-202ENST00000421127 INAFM2P0DMQ5 153 aa13.14□□□□□ -0.31
CCDC17-202ENST00000421127 NOP10Q9NPE3 64 aaKnown RBP13.14□□□□□ -0.31
CCDC17-202ENST00000421127 FAM236AA0A1B0GUQ0 79 aa13.13□□□□□ -0.31
CCDC17-202ENST00000421127 FAM236BA0A1B0GV22 79 aa13.13□□□□□ -0.31
CCDC17-202ENST00000421127 C22orf24Q9Y442 160 aa13.13□□□□□ -0.31
CCDC17-202ENST00000421127 SDIM1Q6ZPB5 146 aa13.12□□□□□ -0.31
CCDC17-202ENST00000421127 MIR7-3HGQ8N6C7 128 aa13.12□□□□□ -0.31
CCDC17-202ENST00000421127 OVOL2Q9BRP0 275 aa13.12□□□□□ -0.31
CCDC17-202ENST00000421127 MALP21145 153 aa13.11□□□□□ -0.31
CCDC17-202ENST00000421127 SND1-IT1Q9HBX3 110 aa13.11□□□□□ -0.31
CCDC17-202ENST00000421127 SETD2Q9BYW2 2564 aaPredicted RBP13.11□□□□□ -0.31
CCDC17-202ENST00000421127 LINC00337Q8N6G1 96 aa13.1□□□□□ -0.31
CCDC17-202ENST00000421127 Q9HAA7 133 aa13.1□□□□□ -0.31
CCDC17-202ENST00000421127 SMR3AQ99954 134 aa13.09□□□□□ -0.31
CCDC17-202ENST00000421127 TOMM7Q9P0U1 55 aa13.09□□□□□ -0.31
CCDC17-202ENST00000421127 IGKV2-28A0A075B6P5 120 aa13.09□□□□□ -0.31
CCDC17-202ENST00000421127 TRGV2A0A075B6R0 118 aa13.09□□□□□ -0.31
CCDC17-202ENST00000421127 IGKV2D-28P01615 120 aa13.09□□□□□ -0.31
CCDC17-202ENST00000421127 C16orf74Q96GX8 76 aa13.09□□□□□ -0.31
CCDC17-202ENST00000421127 A0A1W2PRX2 142 aa13.08□□□□□ -0.32
CCDC17-202ENST00000421127 HIVEP1P15822 2718 aa13.08□□□□□ -0.32
CCDC17-202ENST00000421127 LOC100131303A0A0U1RQF7 123 aa13.08□□□□□ -0.32
CCDC17-202ENST00000421127 TRBV6-4A0A1B0GX49 114 aa13.08□□□□□ -0.32
CCDC17-202ENST00000421127 CCL24O00175 119 aa13.08□□□□□ -0.32
CCDC17-202ENST00000421127 GAGE2AQ6NT46 116 aa13.08□□□□□ -0.32
CCDC17-202ENST00000421127 TMEM86BQ8N661 226 aa13.08□□□□□ -0.32
CCDC17-202ENST00000421127 LINC00158P58513 81 aa13.07□□□□□ -0.32
CCDC17-202ENST00000421127 DNAL4O96015 105 aa13.07□□□□□ -0.32
CCDC17-202ENST00000421127 CXCL5P42830 114 aa13.07□□□□□ -0.32
CCDC17-202ENST00000421127 IGKV3OR2-268A0A0C4DH90 116 aa13.06□□□□□ -0.32
CCDC17-202ENST00000421127 PLAC8L1A1L4L8 177 aa13.06□□□□□ -0.32
CCDC17-202ENST00000421127 GIG44P09565 113 aaPredicted RBP13.05□□□□□ -0.32
CCDC17-202ENST00000421127 CMC4P56277 68 aaPredicted RBP13.05□□□□□ -0.32
CCDC17-202ENST00000421127 C11orf44Q8N8P7 122 aa13.05□□□□□ -0.32
CCDC17-202ENST00000421127 SMIM11BQ8TCY0 68 aa13.05□□□□□ -0.32
CCDC17-202ENST00000421127 TMEM126AQ9H061 195 aa13.05□□□□□ -0.32
CCDC17-202ENST00000421127 SETXQ7Z333 2677 aaKnown RBP13.05□□□□□ -0.32
CCDC17-202ENST00000421127 HIVEP2P31629 2446 aa13.05□□□□□ -0.32
CCDC17-202ENST00000421127 ATP5G1P05496 136 aa13.05□□□□□ -0.32
CCDC17-202ENST00000421127 TRGV4A0A0C4DH28 118 aa13.04□□□□□ -0.32
CCDC17-202ENST00000421127 SMIM20Q8N5G0 67 aa13.04□□□□□ -0.32
CCDC17-202ENST00000421127 A0A087WYN8 130 aa13.04□□□□□ -0.32
CCDC17-202ENST00000421127 IBA57-AS1B1ANH7 110 aa13.04□□□□□ -0.32
CCDC17-202ENST00000421127 H0YGX0 51 aa13.04□□□□□ -0.32
CCDC17-202ENST00000421127 CCL18P55774 89 aa13.04□□□□□ -0.32
CCDC17-202ENST00000421127 C5orf38Q86SI9 138 aa13.04□□□□□ -0.32
CCDC17-202ENST00000421127 FAM110AQ9BQ89 295 aa13.04□□□□□ -0.32
CCDC17-202ENST00000421127 IGLV4-60A0A075B6I1 120 aa13.03□□□□□ -0.32
CCDC17-202ENST00000421127 IGHV3OR16-9A0A0B4J2B5 98 aa13.03□□□□□ -0.32
CCDC17-202ENST00000421127 TRBV6-8A0A0A6YYG3 113 aa13.02□□□□□ -0.33
CCDC17-202ENST00000421127 NSD1Q96L73 2696 aaPredicted RBP13.01□□□□□ -0.33
CCDC17-202ENST00000421127 A0A087WZ39 114 aa13.01□□□□□ -0.33
CCDC17-202ENST00000421127 C3orf22Q8N5N4 141 aa13.01□□□□□ -0.33
CCDC17-202ENST00000421127 DNAJC9-AS1A6NH13 148 aa13□□□□□ -0.33
CCDC17-202ENST00000421127 RPL35AP18077 110 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms