RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 ZNF727A8MUV8 499 aa10.16□□□□□ -0.78
UPF3AP3-201ENST00000420996 C10orf25Q5T742 122 aa10.16□□□□□ -0.78
UPF3AP3-201ENST00000420996 FAM104AQ969W3 186 aa10.16□□□□□ -0.78
UPF3AP3-201ENST00000420996 C20orf78Q9BR46 151 aa10.16□□□□□ -0.78
UPF3AP3-201ENST00000420996 V9GYV3 84 aa10.16□□□□□ -0.78
UPF3AP3-201ENST00000420996 TCAPO15273 167 aa10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 KRTAP1-4P0C5Y4 121 aa10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 RPL39P62891 51 aaKnown RBP10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 RPL32P62910 135 aaKnown RBP10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 MRPL51Q4U2R6 128 aaKnown RBP10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 FAM104BQ5XKR9 115 aa10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 UNQ6190/PRO20217Q6UXQ8 127 aa10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 FAM19A5Q7Z5A7 132 aaPredicted RBP10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 EIF5A2Q9GZV4 153 aaKnown RBP10.15□□□□□ -0.78
UPF3AP3-201ENST00000420996 TRBV24-1A0A075B6N3 115 aa10.14□□□□□ -0.79
UPF3AP3-201ENST00000420996 LINC00862A6NCI5 91 aa10.14□□□□□ -0.79
UPF3AP3-201ENST00000420996 C6orf48Q9UBA6 75 aa10.14□□□□□ -0.79
UPF3AP3-201ENST00000420996 MRPS36P82909 103 aaKnown RBP10.13□□□□□ -0.79
UPF3AP3-201ENST00000420996 GAGE2EQ4V326 116 aa10.13□□□□□ -0.79
UPF3AP3-201ENST00000420996 SMDT1Q9H4I9 107 aa10.13□□□□□ -0.79
UPF3AP3-201ENST00000420996 SPANXA1Q9NS26 97 aa10.13□□□□□ -0.79
UPF3AP3-201ENST00000420996 GAGE2DQ9UEU5 116 aa10.13□□□□□ -0.79
UPF3AP3-201ENST00000420996 NAT8BQ9UHF3 227 aa10.13□□□□□ -0.79
UPF3AP3-201ENST00000420996 KRTAP7-1Q8IUC3 87 aa10.12□□□□□ -0.79
UPF3AP3-201ENST00000420996 SRP19P09132 144 aaKnown RBP10.11□□□□□ -0.79
UPF3AP3-201ENST00000420996 CKS2P33552 79 aa10.11□□□□□ -0.79
UPF3AP3-201ENST00000420996 RPL13AP40429 203 aaKnown RBP10.11□□□□□ -0.79
UPF3AP3-201ENST00000420996 UBE2D1P51668 147 aa10.11□□□□□ -0.79
UPF3AP3-201ENST00000420996 HBBP68871 147 aa10.11□□□□□ -0.79
UPF3AP3-201ENST00000420996 PRR4Q16378 134 aa10.11□□□□□ -0.79
UPF3AP3-201ENST00000420996 IFITM10A6NMD0 228 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 M0QXV9 152 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 TNFRSF6BO95407 300 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 UBE2BP63146 152 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 KIAA0087Q14695 138 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 FAM74A3Q4VXF1 159 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 SMIM2Q9BVW6 85 aa10.1□□□□□ -0.79
UPF3AP3-201ENST00000420996 TGIF2-C20orf24A0A0A6YYL0 155 aa10.09□□□□□ -0.79
UPF3AP3-201ENST00000420996 C9JQL5 133 aa10.09□□□□□ -0.79
UPF3AP3-201ENST00000420996 SRSF3P84103 164 aaKnown RBP10.09□□□□□ -0.79
UPF3AP3-201ENST00000420996 A0A1B0GW15 77 aa10.08□□□□□ -0.8
UPF3AP3-201ENST00000420996 CARHSP1Q9Y2V2 147 aaKnown RBP10.08□□□□□ -0.8
UPF3AP3-201ENST00000420996 TRBV30A0A0K0K1B3 111 aa10.07□□□□□ -0.8
UPF3AP3-201ENST00000420996 SMIM27A0A1W2PRY6 76 aa10.07□□□□□ -0.8
UPF3AP3-201ENST00000420996 NDUFC2-KCTD14E9PQ53 114 aa10.06□□□□□ -0.8
UPF3AP3-201ENST00000420996 RPL23P62829 140 aaKnown RBP10.06□□□□□ -0.8
UPF3AP3-201ENST00000420996 A0A0U1RQV1 116 aa10.05□□□□□ -0.8
UPF3AP3-201ENST00000420996 D6R8Y8 96 aa10.05□□□□□ -0.8
UPF3AP3-201ENST00000420996 NPYP01303 97 aa10.05□□□□□ -0.8
UPF3AP3-201ENST00000420996 C9orf129Q5T035 196 aaKnown RBP10.05□□□□□ -0.8
UPF3AP3-201ENST00000420996 LINC00242Q5T6M2 205 aa10.05□□□□□ -0.8
UPF3AP3-201ENST00000420996 MUC2Q02817 5179 aa10.04□□□□□ -0.8
UPF3AP3-201ENST00000420996 IFI27P40305 119 aaPredicted RBP10.04□□□□□ -0.8
UPF3AP3-201ENST00000420996 C2orf82Q6UX34 121 aa10.04□□□□□ -0.8
UPF3AP3-201ENST00000420996 PACRGQ96M98 296 aaPredicted RBP10.04□□□□□ -0.8
UPF3AP3-201ENST00000420996 PYGO1Q9Y3Y4 419 aa10.04□□□□□ -0.8
UPF3AP3-201ENST00000420996 F8W036 122 aa10.03□□□□□ -0.8
UPF3AP3-201ENST00000420996 ZNF861PO60384 105 aa10.03□□□□□ -0.8
UPF3AP3-201ENST00000420996 S100A8P05109 93 aa10.03□□□□□ -0.8
UPF3AP3-201ENST00000420996 ADIRFQ15847 76 aa10.03□□□□□ -0.8
UPF3AP3-201ENST00000420996 IGLV4-3A0A075B6K6 122 aa10.02□□□□□ -0.81
UPF3AP3-201ENST00000420996 PPBPP02775 128 aa10.02□□□□□ -0.81
UPF3AP3-201ENST00000420996 RAB5AP20339 215 aa10.02□□□□□ -0.81
UPF3AP3-201ENST00000420996 NAT8Q9UHE5 227 aa10.02□□□□□ -0.81
UPF3AP3-201ENST00000420996 LINC01561Q8N1V8 128 aa10.01□□□□□ -0.81
UPF3AP3-201ENST00000420996 TMEM141Q96I45 108 aa10.01□□□□□ -0.81
UPF3AP3-201ENST00000420996 NUPR1O60356 82 aa10□□□□□ -0.81
UPF3AP3-201ENST00000420996 MRPL54Q6P161 138 aaKnown RBP10□□□□□ -0.81
UPF3AP3-201ENST00000420996 A0A1B0GXF2 115 aa9.99□□□□□ -0.81
UPF3AP3-201ENST00000420996 TSPAN13O95857 204 aa9.98□□□□□ -0.81
UPF3AP3-201ENST00000420996 TEX43Q6ZNM6 134 aa9.98□□□□□ -0.81
UPF3AP3-201ENST00000420996 ORMDL3Q8N138 153 aa9.98□□□□□ -0.81
UPF3AP3-201ENST00000420996 KRTAP9-2Q9BYQ4 174 aa9.98□□□□□ -0.81
UPF3AP3-201ENST00000420996 C22orf24Q9Y442 160 aa9.98□□□□□ -0.81
UPF3AP3-201ENST00000420996 PRSS2P07478 247 aa9.97□□□□□ -0.81
UPF3AP3-201ENST00000420996 LBHQ53QV2 105 aaPredicted RBP9.97□□□□□ -0.81
UPF3AP3-201ENST00000420996 TMEM136Q6ZRR5 245 aa9.97□□□□□ -0.81
UPF3AP3-201ENST00000420996 Q6ZN92 141 aa9.96□□□□□ -0.82
UPF3AP3-201ENST00000420996 LINC00469Q8N7U9 141 aa9.96□□□□□ -0.82
UPF3AP3-201ENST00000420996 PRELID3AQ96N28 172 aa9.96□□□□□ -0.82
UPF3AP3-201ENST00000420996 C2orf88Q9BSF0 95 aa9.96□□□□□ -0.82
UPF3AP3-201ENST00000420996 CTDSP1Q9GZU7 261 aa9.96□□□□□ -0.82
UPF3AP3-201ENST00000420996 PRSS47A8MTI9 375 aa9.95□□□□□ -0.82
UPF3AP3-201ENST00000420996 CKS1BP61024 79 aa9.95□□□□□ -0.82
UPF3AP3-201ENST00000420996 C6orf226Q5I0X4 101 aa9.95□□□□□ -0.82
UPF3AP3-201ENST00000420996 TOMM7Q9P0U1 55 aa9.95□□□□□ -0.82
UPF3AP3-201ENST00000420996 PEA15Q15121 130 aa9.94□□□□□ -0.82
UPF3AP3-201ENST00000420996 AMELXQ99217 191 aa9.94□□□□□ -0.82
UPF3AP3-201ENST00000420996 XAGE1AQ9HD64 81 aa9.94□□□□□ -0.82
UPF3AP3-201ENST00000420996 A0A087X002 238 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 RPL28P46779 137 aaKnown RBP9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 NDUFA5Q16718 116 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 ZC2HC1BQ5TFG8 222 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 LINC00173Q6ZV60 143 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 ATP5L2Q7Z4Y8 100 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 Q8IZM0 81 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 TP73-AS1Q9UF72 201 aa9.93□□□□□ -0.82
UPF3AP3-201ENST00000420996 CRYGAP11844 174 aa9.92□□□□□ -0.82
UPF3AP3-201ENST00000420996 ALKBH7Q9BT30 221 aaPredicted RBP9.92□□□□□ -0.82
UPF3AP3-201ENST00000420996 VCX2Q9H322 139 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms