RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 C20orf203Q8NBC4 194 aa9.24□□□□□ -0.93
LINC00642-201ENST00000419459 H7C2G1 150 aa9.24□□□□□ -0.93
LINC00642-201ENST00000419459 ICOSQ9Y6W8 199 aa9.24□□□□□ -0.93
LINC00642-201ENST00000419459 TRBV7-7A0A0K0K1E9 115 aa9.23□□□□□ -0.93
LINC00642-201ENST00000419459 M0QY20 66 aa9.23□□□□□ -0.93
LINC00642-201ENST00000419459 DEFB135Q30KP9 77 aa9.23□□□□□ -0.93
LINC00642-201ENST00000419459 C9orf85Q96MD7 179 aa9.23□□□□□ -0.93
LINC00642-201ENST00000419459 PYGO1Q9Y3Y4 419 aa9.23□□□□□ -0.93
LINC00642-201ENST00000419459 MUC4Q99102 2169 aa9.23□□□□□ -0.93
LINC00642-201ENST00000419459 ACYP1P07311 99 aa9.22□□□□□ -0.93
LINC00642-201ENST00000419459 LITAFQ99732 161 aa9.22□□□□□ -0.93
LINC00642-201ENST00000419459 IMUPQ9GZP8 106 aa9.22□□□□□ -0.93
LINC00642-201ENST00000419459 TMEM126AQ9H061 195 aa9.22□□□□□ -0.93
LINC00642-201ENST00000419459 H7C423 109 aa9.22□□□□□ -0.93
LINC00642-201ENST00000419459 I3L3M4 83 aa9.22□□□□□ -0.93
LINC00642-201ENST00000419459 IGLV4-3A0A075B6K6 122 aa9.21□□□□□ -0.93
LINC00642-201ENST00000419459 A0A087WWL8 130 aa9.21□□□□□ -0.93
LINC00642-201ENST00000419459 INSP01308 110 aa9.21□□□□□ -0.93
LINC00642-201ENST00000419459 C1orf158Q8N1D5 194 aa9.21□□□□□ -0.93
LINC00642-201ENST00000419459 CSNK1G2-AS1Q8NCQ2 148 aa9.21□□□□□ -0.93
LINC00642-201ENST00000419459 MRAPQ8TCY5 172 aa9.21□□□□□ -0.93
LINC00642-201ENST00000419459 TIMM21Q9BVV7 248 aa9.21□□□□□ -0.93
LINC00642-201ENST00000419459 LST1O00453 97 aa9.21□□□□□ -0.94
LINC00642-201ENST00000419459 IGHV3-30-3P0DP02 117 aa9.21□□□□□ -0.94
LINC00642-201ENST00000419459 MRPS36P82909 103 aaKnown RBP9.21□□□□□ -0.94
LINC00642-201ENST00000419459 JPT2Q9H910 190 aa9.21□□□□□ -0.94
LINC00642-201ENST00000419459 EDA2RQ9HAV5 297 aa9.21□□□□□ -0.94
LINC00642-201ENST00000419459 HUWE1Q7Z6Z7 4374 aaKnown RBP9.2□□□□□ -0.94
LINC00642-201ENST00000419459 TIMM17BO60830 172 aa9.2□□□□□ -0.94
LINC00642-201ENST00000419459 ZNF56Q15929 161 aa9.2□□□□□ -0.94
LINC00642-201ENST00000419459 MIAQ16674 131 aa9.2□□□□□ -0.94
LINC00642-201ENST00000419459 IGHV3-16A0A0C4DH30 117 aa9.19□□□□□ -0.94
LINC00642-201ENST00000419459 IGHV1-58A0A0C4DH39 117 aa9.19□□□□□ -0.94
LINC00642-201ENST00000419459 A0A0J9YXV3 536 aa9.19□□□□□ -0.94
LINC00642-201ENST00000419459 TMEM101Q96IK0 257 aa9.19□□□□□ -0.94
LINC00642-201ENST00000419459 LINC01587Q99440 93 aa9.19□□□□□ -0.94
LINC00642-201ENST00000419459 APOC4P55056 127 aa9.19□□□□□ -0.94
LINC00642-201ENST00000419459 RETNQ9HD89 108 aa9.19□□□□□ -0.94
LINC00642-201ENST00000419459 DNAH9Q9NYC9 4486 aa9.18□□□□□ -0.94
LINC00642-201ENST00000419459 MEIG1Q5JSS6 88 aa9.18□□□□□ -0.94
LINC00642-201ENST00000419459 FAM74A4Q5TZK3 123 aa9.18□□□□□ -0.94
LINC00642-201ENST00000419459 SMIM20Q8N5G0 67 aa9.18□□□□□ -0.94
LINC00642-201ENST00000419459 HERV-K104P63124 156 aa9.17□□□□□ -0.94
LINC00642-201ENST00000419459 KIR2DL5BQ8NHK3 375 aa9.17□□□□□ -0.94
LINC00642-201ENST00000419459 OPRPNQ99935 248 aaPredicted RBP9.17□□□□□ -0.94
LINC00642-201ENST00000419459 FBN3Q75N90 2809 aa9.17□□□□□ -0.94
LINC00642-201ENST00000419459 IGHV3-64A0A075B6Q5 118 aa9.17□□□□□ -0.94
LINC00642-201ENST00000419459 IGHV1OR15-1A0A075B7D0 117 aa9.17□□□□□ -0.94
LINC00642-201ENST00000419459 A8MZ25 164 aa9.17□□□□□ -0.94
LINC00642-201ENST00000419459 NDUFA12Q9UI09 145 aa9.17□□□□□ -0.94
LINC00642-201ENST00000419459 PRSS2P07478 247 aa9.16□□□□□ -0.94
LINC00642-201ENST00000419459 STAB2Q8WWQ8 2551 aa9.16□□□□□ -0.94
LINC00642-201ENST00000419459 TRGV11A0A075B6L2 103 aa9.15□□□□□ -0.94
LINC00642-201ENST00000419459 TINCRA0A1B0GVN0 87 aa9.15□□□□□ -0.94
LINC00642-201ENST00000419459 DEFB4AO15263 64 aa9.15□□□□□ -0.94
LINC00642-201ENST00000419459 ATP5G1P05496 136 aa9.15□□□□□ -0.94
LINC00642-201ENST00000419459 VSIG2Q96IQ7 327 aa9.15□□□□□ -0.94
LINC00642-201ENST00000419459 SPXQ9BT56 116 aa9.15□□□□□ -0.94
LINC00642-201ENST00000419459 TGP01266 2768 aa9.15□□□□□ -0.94
LINC00642-201ENST00000419459 X6R8D5 127 aa9.14□□□□□ -0.95
LINC00642-201ENST00000419459 DEFB104AQ8WTQ1 72 aa9.14□□□□□ -0.95
LINC00642-201ENST00000419459 ADAMTSL4-AS1Q5T5F5 129 aa9.13□□□□□ -0.95
LINC00642-201ENST00000419459 COPS9Q8WXC6 57 aa9.13□□□□□ -0.95
LINC00642-201ENST00000419459 TNFRSF18Q9Y5U5 241 aa9.13□□□□□ -0.95
LINC00642-201ENST00000419459 OVOL2Q9BRP0 275 aa9.12□□□□□ -0.95
LINC00642-201ENST00000419459 LINC00643Q86TS7 51 aa9.12□□□□□ -0.95
LINC00642-201ENST00000419459 C11orf72Q8NBR9 251 aa9.12□□□□□ -0.95
LINC00642-201ENST00000419459 CLEC2BQ92478 149 aa9.12□□□□□ -0.95
LINC00642-201ENST00000419459 PLAC8L1A1L4L8 177 aa9.11□□□□□ -0.95
LINC00642-201ENST00000419459 FAM104AQ969W3 186 aa9.11□□□□□ -0.95
LINC00642-201ENST00000419459 TRAV8-3A0A0A6YYJ7 113 aa9.1□□□□□ -0.95
LINC00642-201ENST00000419459 CIRBPQ14011 172 aaKnown RBP9.1□□□□□ -0.95
LINC00642-201ENST00000419459 PIK3CD-AS1Q5SR53 167 aa9.1□□□□□ -0.95
LINC00642-201ENST00000419459 CHCHD5Q9BSY4 110 aa9.1□□□□□ -0.95
LINC00642-201ENST00000419459 NDUFA1O15239 70 aa9.1□□□□□ -0.95
LINC00642-201ENST00000419459 SDIM1Q6ZPB5 146 aa9.1□□□□□ -0.95
LINC00642-201ENST00000419459 NACAE9PAV3 2078 aa9.1□□□□□ -0.95
LINC00642-201ENST00000419459 IGHV4-28A0A0C4DH34 117 aa9.09□□□□□ -0.95
LINC00642-201ENST00000419459 COX7A2LO14548 114 aa9.09□□□□□ -0.95
LINC00642-201ENST00000419459 CXCL5P42830 114 aa9.09□□□□□ -0.95
LINC00642-201ENST00000419459 PPDPFQ9H3Y8 114 aa9.09□□□□□ -0.95
LINC00642-201ENST00000419459 NOP10Q9NPE3 64 aaKnown RBP9.09□□□□□ -0.95
LINC00642-201ENST00000419459 IGLV5-45A0A087WSX0 123 aa9.09□□□□□ -0.95
LINC00642-201ENST00000419459 UQCRQO14949 82 aa9.09□□□□□ -0.95
LINC00642-201ENST00000419459 Q8NAQ8 132 aa9.09□□□□□ -0.95
LINC00642-201ENST00000419459 FAM236AA0A1B0GUQ0 79 aa9.08□□□□□ -0.96
LINC00642-201ENST00000419459 FAM236BA0A1B0GV22 79 aa9.08□□□□□ -0.96
LINC00642-201ENST00000419459 TRACP01848 142 aa9.08□□□□□ -0.96
LINC00642-201ENST00000419459 TIRAPP58753 221 aa9.08□□□□□ -0.96
LINC00642-201ENST00000419459 C16orf74Q96GX8 76 aa9.08□□□□□ -0.96
LINC00642-201ENST00000419459 TM2D3Q9BRN9 247 aa9.08□□□□□ -0.96
LINC00642-201ENST00000419459 LINC00467Q9BRT7 94 aa9.08□□□□□ -0.96
LINC00642-201ENST00000419459 ZNF415Q09FC8 603 aa9.07□□□□□ -0.96
LINC00642-201ENST00000419459 Q6ZTI0 123 aa9.07□□□□□ -0.96
LINC00642-201ENST00000419459 C3orf22Q8N5N4 141 aa9.07□□□□□ -0.96
LINC00642-201ENST00000419459 UBE2D4Q9Y2X8 147 aa9.07□□□□□ -0.96
LINC00642-201ENST00000419459 FAM222AQ5U5X8 452 aa9.07□□□□□ -0.96
LINC00642-201ENST00000419459 DAND5Q8N907 189 aa9.07□□□□□ -0.96
LINC00642-201ENST00000419459 TRGV1A0A0A0MS02 117 aa9.06□□□□□ -0.96
LINC00642-201ENST00000419459 IL17DQ8TAD2 202 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms