RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 P0C879 139 aa8.26□□□□□ -1.09
PTCH1-205ENST00000418258 RETNQ9HD89 108 aa8.26□□□□□ -1.09
PTCH1-205ENST00000418258 CRIP1P50238 77 aa8.26□□□□□ -1.09
PTCH1-205ENST00000418258 C10orf25Q5T742 122 aa8.26□□□□□ -1.09
PTCH1-205ENST00000418258 TLN2Q9Y4G6 2542 aa8.25□□□□□ -1.09
PTCH1-205ENST00000418258 C20orf197Q8N268 126 aa8.25□□□□□ -1.09
PTCH1-205ENST00000418258 IGLV2-8P01709 118 aa8.24□□□□□ -1.09
PTCH1-205ENST00000418258 MUC22E2RYF6 1773 aaPredicted RBP8.24□□□□□ -1.09
PTCH1-205ENST00000418258 LINC00959A0A1B0GUT2 108 aa8.24□□□□□ -1.09
PTCH1-205ENST00000418258 G3V4G9 280 aa8.24□□□□□ -1.09
PTCH1-205ENST00000418258 WFDC13Q8IUB5 93 aa8.24□□□□□ -1.09
PTCH1-205ENST00000418258 COX17Q14061 63 aa8.24□□□□□ -1.09
PTCH1-205ENST00000418258 BRWD1-AS2P59051 145 aa8.24□□□□□ -1.09
PTCH1-205ENST00000418258 TRIAP1O43715 76 aa8.23□□□□□ -1.09
PTCH1-205ENST00000418258 A8MZ25 164 aa8.23□□□□□ -1.09
PTCH1-205ENST00000418258 C11orf1Q9H5F2 150 aa8.23□□□□□ -1.09
PTCH1-205ENST00000418258 JMJD1CQ15652 2540 aa8.23□□□□□ -1.09
PTCH1-205ENST00000418258 MRGPRG-AS1Q2M3A8 158 aa8.22□□□□□ -1.09
PTCH1-205ENST00000418258 Q6ZVQ6 151 aa8.22□□□□□ -1.09
PTCH1-205ENST00000418258 ABCA12Q86UK0 2595 aa8.22□□□□□ -1.09
PTCH1-205ENST00000418258 TSHBP01222 138 aa8.22□□□□□ -1.09
PTCH1-205ENST00000418258 TRBV27A0A0K0K1C4 114 aa8.22□□□□□ -1.09
PTCH1-205ENST00000418258 M0QXV9 152 aa8.22□□□□□ -1.09
PTCH1-205ENST00000418258 RPL28P46779 137 aaKnown RBP8.22□□□□□ -1.09
PTCH1-205ENST00000418258 RNF185Q96GF1 192 aa8.22□□□□□ -1.09
PTCH1-205ENST00000418258 ATP5EP2Q5VTU8 51 aa8.21□□□□□ -1.09
PTCH1-205ENST00000418258 FSHBP01225 129 aa8.21□□□□□ -1.1
PTCH1-205ENST00000418258 EIF4EBP1Q13541 118 aaPredicted RBP8.21□□□□□ -1.1
PTCH1-205ENST00000418258 Q6ZQY7 126 aa8.21□□□□□ -1.1
PTCH1-205ENST00000418258 COL27A1Q8IZC6 1860 aaPredicted RBP8.21□□□□□ -1.1
PTCH1-205ENST00000418258 RNASE3P12724 160 aaKnown RBP8.21□□□□□ -1.1
PTCH1-205ENST00000418258 BRI3O95415 125 aa8.21□□□□□ -1.1
PTCH1-205ENST00000418258 PRO3102Q9H379 93 aa8.2□□□□□ -1.1
PTCH1-205ENST00000418258 PYGO1Q9Y3Y4 419 aa8.2□□□□□ -1.1
PTCH1-205ENST00000418258 IGLV1-40P01703 118 aa8.2□□□□□ -1.1
PTCH1-205ENST00000418258 Q6ZPA2 131 aa8.2□□□□□ -1.1
PTCH1-205ENST00000418258 CDSNQ15517 529 aa8.2□□□□□ -1.1
PTCH1-205ENST00000418258 NDUFA7O95182 113 aa8.2□□□□□ -1.1
PTCH1-205ENST00000418258 SMIM11BQ8TCY0 68 aa8.2□□□□□ -1.1
PTCH1-205ENST00000418258 Q8N9L7 120 aa8.19□□□□□ -1.1
PTCH1-205ENST00000418258 TLN1Q9Y490 2541 aaKnown RBP8.19□□□□□ -1.1
PTCH1-205ENST00000418258 FAM236DA0A1B0GTK5 79 aa8.19□□□□□ -1.1
PTCH1-205ENST00000418258 FAM236CP0DP71 79 aa8.19□□□□□ -1.1
PTCH1-205ENST00000418258 NCOR2Q9Y618 2525 aa8.18□□□□□ -1.1
PTCH1-205ENST00000418258 FAM30AQ9NZY2 134 aa8.18□□□□□ -1.1
PTCH1-205ENST00000418258 CYSRT1A8MQ03 144 aa8.18□□□□□ -1.1
PTCH1-205ENST00000418258 IGLV2-11P01706 119 aa8.18□□□□□ -1.1
PTCH1-205ENST00000418258 MAPKAPK5-AS1Q8N8E1 139 aa8.18□□□□□ -1.1
PTCH1-205ENST00000418258 U3KQK5 164 aa8.18□□□□□ -1.1
PTCH1-205ENST00000418258 X6R8D5 127 aa8.18□□□□□ -1.1
PTCH1-205ENST00000418258 TRBV30A0A0K0K1B3 111 aa8.18□□□□□ -1.1
PTCH1-205ENST00000418258 NDUFV3P56181 108 aaKnown RBP8.18□□□□□ -1.1
PTCH1-205ENST00000418258 ZNF73O43830 326 aaPredicted RBP8.18□□□□□ -1.1
PTCH1-205ENST00000418258 NRACQ8N912 160 aa8.18□□□□□ -1.1
PTCH1-205ENST00000418258 REG3GQ6UW15 175 aa8.17□□□□□ -1.1
PTCH1-205ENST00000418258 Q8N6K4 173 aa8.17□□□□□ -1.1
PTCH1-205ENST00000418258 KLLNB2CW77 178 aa8.17□□□□□ -1.1
PTCH1-205ENST00000418258 PRR9Q5T870 116 aa8.17□□□□□ -1.1
PTCH1-205ENST00000418258 SNURFQ9Y675 71 aa8.17□□□□□ -1.1
PTCH1-205ENST00000418258 MRPL55Q7Z7F7 128 aaKnown RBP8.17□□□□□ -1.1
PTCH1-205ENST00000418258 MBD6Q96DN6 1003 aa8.17□□□□□ -1.1
PTCH1-205ENST00000418258 KRTAP10-9P60411 292 aa8.17□□□□□ -1.1
PTCH1-205ENST00000418258 TIMM17BO60830 172 aa8.17□□□□□ -1.1
PTCH1-205ENST00000418258 MRPS36P82909 103 aaKnown RBP8.17□□□□□ -1.1
PTCH1-205ENST00000418258 FAM19A3Q7Z5A8 133 aa8.16□□□□□ -1.1
PTCH1-205ENST00000418258 NDUFC2-KCTD14E9PQ53 114 aa8.16□□□□□ -1.1
PTCH1-205ENST00000418258 PRYO14603 147 aa8.16□□□□□ -1.1
PTCH1-205ENST00000418258 UQCRQO14949 82 aa8.16□□□□□ -1.1
PTCH1-205ENST00000418258 LINC01556Q5JQF7 62 aa8.16□□□□□ -1.1
PTCH1-205ENST00000418258 CENPFP49454 3210 aa8.16□□□□□ -1.1
PTCH1-205ENST00000418258 Q8IZM0 81 aa8.16□□□□□ -1.1
PTCH1-205ENST00000418258 RNASE8Q8TDE3 154 aaKnown RBP8.16□□□□□ -1.1
PTCH1-205ENST00000418258 C6orf223Q8N319 242 aa8.16□□□□□ -1.1
PTCH1-205ENST00000418258 GOLGB1Q14789 3259 aaKnown RBP8.15□□□□□ -1.1
PTCH1-205ENST00000418258 AVPP01185 164 aa8.15□□□□□ -1.1
PTCH1-205ENST00000418258 A6NED7 52 aa8.15□□□□□ -1.1
PTCH1-205ENST00000418258 ESRGQ1W209 222 aa8.15□□□□□ -1.1
PTCH1-205ENST00000418258 Q6ZTC4 211 aa8.15□□□□□ -1.1
PTCH1-205ENST00000418258 C1orf134Q5TEV5 83 aa8.15□□□□□ -1.11
PTCH1-205ENST00000418258 CDC42SE2Q9NRR3 84 aa8.15□□□□□ -1.11
PTCH1-205ENST00000418258 PRR4Q16378 134 aa8.14□□□□□ -1.11
PTCH1-205ENST00000418258 C1orf137Q5JT78 98 aa8.14□□□□□ -1.11
PTCH1-205ENST00000418258 ZNF295-AS1Q8N0V1 137 aa8.14□□□□□ -1.11
PTCH1-205ENST00000418258 ANKRD17O75179 2603 aaKnown RBP8.14□□□□□ -1.11
PTCH1-205ENST00000418258 MT-ATP8P03928 68 aa8.14□□□□□ -1.11
PTCH1-205ENST00000418258 RETNLBQ9BQ08 111 aa8.14□□□□□ -1.11
PTCH1-205ENST00000418258 V9GYY9 64 aa8.14□□□□□ -1.11
PTCH1-205ENST00000418258 EDN2P20800 178 aa8.14□□□□□ -1.11
PTCH1-205ENST00000418258 C9orf116Q5BN46 136 aaPredicted RBP8.13□□□□□ -1.11
PTCH1-205ENST00000418258 NDUFC1O43677 76 aa8.13□□□□□ -1.11
PTCH1-205ENST00000418258 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.13□□□□□ -1.11
PTCH1-205ENST00000418258 FAM240AA0A1B0GVK7 77 aa8.12□□□□□ -1.11
PTCH1-205ENST00000418258 UNQ6190/PRO20217Q6UXQ8 127 aa8.12□□□□□ -1.11
PTCH1-205ENST00000418258 CRIP3Q6Q6R5 217 aa8.12□□□□□ -1.11
PTCH1-205ENST00000418258 SETD2Q9BYW2 2564 aaPredicted RBP8.12□□□□□ -1.11
PTCH1-205ENST00000418258 TP73-AS1Q9UF72 201 aa8.11□□□□□ -1.11
PTCH1-205ENST00000418258 A0A0U1RQV1 116 aa8.11□□□□□ -1.11
PTCH1-205ENST00000418258 SERP2Q8N6R1 65 aa8.11□□□□□ -1.11
PTCH1-205ENST00000418258 IGHV6-1A0A0B4J1U7 121 aa8.11□□□□□ -1.11
PTCH1-205ENST00000418258 LST1O00453 97 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms