RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 NFE4Q86UQ8 179 aa9.04□□□□□ -0.96
HLA-DMB-258ENST00000418107 MIEN1Q9BRT3 115 aa9.04□□□□□ -0.96
HLA-DMB-258ENST00000418107 HSPG2P98160 4391 aa9.04□□□□□ -0.96
HLA-DMB-258ENST00000418107 IGLV4-60A0A075B6I1 120 aa9.03□□□□□ -0.96
HLA-DMB-258ENST00000418107 RBX1P62877 108 aa9.03□□□□□ -0.96
HLA-DMB-258ENST00000418107 C15orf53Q8NAA6 179 aa9.03□□□□□ -0.96
HLA-DMB-258ENST00000418107 A0A1B0GUV1 79 aa9.02□□□□□ -0.97
HLA-DMB-258ENST00000418107 TINCRA0A1B0GVN0 87 aa9.02□□□□□ -0.97
HLA-DMB-258ENST00000418107 UBE2D1P51668 147 aa9.02□□□□□ -0.97
HLA-DMB-258ENST00000418107 TIRAPP58753 221 aa9.02□□□□□ -0.97
HLA-DMB-258ENST00000418107 SEC11AP67812 179 aa9.02□□□□□ -0.97
HLA-DMB-258ENST00000418107 MPV17L2Q567V2 206 aa9.02□□□□□ -0.97
HLA-DMB-258ENST00000418107 LINC00469Q8N7U9 141 aa9.02□□□□□ -0.97
HLA-DMB-258ENST00000418107 COX8AP10176 69 aa9.01□□□□□ -0.97
HLA-DMB-258ENST00000418107 HNRNPA3P51991 378 aaKnown RBP9.01□□□□□ -0.97
HLA-DMB-258ENST00000418107 H3BRM9 83 aa9□□□□□ -0.97
HLA-DMB-258ENST00000418107 M0R2N4 97 aa9□□□□□ -0.97
HLA-DMB-258ENST00000418107 RTL8CO15255 209 aa9□□□□□ -0.97
HLA-DMB-258ENST00000418107 ANGP03950 147 aaKnown RBP9□□□□□ -0.97
HLA-DMB-258ENST00000418107 ZNF22P17026 224 aaPredicted RBP9□□□□□ -0.97
HLA-DMB-258ENST00000418107 HERVK_113P63121 156 aa9□□□□□ -0.97
HLA-DMB-258ENST00000418107 ESRGQ1W209 222 aa8.99□□□□□ -0.97
HLA-DMB-258ENST00000418107 IGHV3-64A0A075B6Q5 118 aa8.99□□□□□ -0.97
HLA-DMB-258ENST00000418107 IGKV2D-26A0A0A0MRZ7 120 aa8.99□□□□□ -0.97
HLA-DMB-258ENST00000418107 E9PLD3 99 aa8.99□□□□□ -0.97
HLA-DMB-258ENST00000418107 SS18Q15532 418 aa8.99□□□□□ -0.97
HLA-DMB-258ENST00000418107 CLPSL2Q6UWE3 100 aa8.99□□□□□ -0.97
HLA-DMB-258ENST00000418107 PCP2Q8IVA1 136 aa8.99□□□□□ -0.97
HLA-DMB-258ENST00000418107 KRTAP4-5Q9BYR2 181 aa8.99□□□□□ -0.97
HLA-DMB-258ENST00000418107 TMEM223A0PJW6 202 aa8.98□□□□□ -0.97
HLA-DMB-258ENST00000418107 LINC00587B1AMM8 73 aa8.98□□□□□ -0.97
HLA-DMB-258ENST00000418107 IGHV3-30P01768 117 aa8.98□□□□□ -0.97
HLA-DMB-258ENST00000418107 IGHV3-33P01772 117 aa8.98□□□□□ -0.97
HLA-DMB-258ENST00000418107 SPINK8P0C7L1 97 aa8.98□□□□□ -0.97
HLA-DMB-258ENST00000418107 IGHV3-30-3P0DP02 117 aa8.98□□□□□ -0.97
HLA-DMB-258ENST00000418107 IGHV3-30-5P0DP03 117 aa8.98□□□□□ -0.97
HLA-DMB-258ENST00000418107 COX6A2Q02221 97 aa8.98□□□□□ -0.97
HLA-DMB-258ENST00000418107 LINC00242Q5T6M2 205 aa8.98□□□□□ -0.97
HLA-DMB-258ENST00000418107 LINC00269Q8N2A0 174 aa8.98□□□□□ -0.97
HLA-DMB-258ENST00000418107 LEPROTO15243 131 aa8.97□□□□□ -0.97
HLA-DMB-258ENST00000418107 LGALS3P17931 250 aaKnown RBP8.97□□□□□ -0.97
HLA-DMB-258ENST00000418107 Q8N3U1 123 aa8.97□□□□□ -0.97
HLA-DMB-258ENST00000418107 PLEKHB2Q96CS7 222 aa8.97□□□□□ -0.97
HLA-DMB-258ENST00000418107 LINC00959A0A1B0GUT2 108 aa8.96□□□□□ -0.98
HLA-DMB-258ENST00000418107 CCL18P55774 89 aa8.96□□□□□ -0.98
HLA-DMB-258ENST00000418107 CTAG1AP78358 180 aa8.96□□□□□ -0.98
HLA-DMB-258ENST00000418107 FAM19A3Q7Z5A8 133 aa8.96□□□□□ -0.98
HLA-DMB-258ENST00000418107 BOD1L2Q8IYS8 172 aa8.96□□□□□ -0.98
HLA-DMB-258ENST00000418107 TTTY13Q9BZ97 58 aa8.96□□□□□ -0.98
HLA-DMB-258ENST00000418107 CDKN2A-AS1Q9UH64 79 aa8.96□□□□□ -0.98
HLA-DMB-258ENST00000418107 LRP1BQ9NZR2 4599 aa8.96□□□□□ -0.98
HLA-DMB-258ENST00000418107 CCL25O15444 150 aa8.95□□□□□ -0.98
HLA-DMB-258ENST00000418107 DLEU1O43261 78 aa8.95□□□□□ -0.98
HLA-DMB-258ENST00000418107 REG3AQ06141 175 aa8.95□□□□□ -0.98
HLA-DMB-258ENST00000418107 WFDC10BQ8IUB3 73 aa8.95□□□□□ -0.98
HLA-DMB-258ENST00000418107 TP73-AS1Q9UF72 201 aa8.95□□□□□ -0.98
HLA-DMB-258ENST00000418107 KLK12Q9UKR0 248 aa8.95□□□□□ -0.98
HLA-DMB-258ENST00000418107 IGLV5-45A0A087WSX0 123 aa8.94□□□□□ -0.98
HLA-DMB-258ENST00000418107 TRAV8-3A0A0A6YYJ7 113 aa8.94□□□□□ -0.98
HLA-DMB-258ENST00000418107 MYMXA0A1B0GTQ4 84 aa8.94□□□□□ -0.98
HLA-DMB-258ENST00000418107 ZNF815PA8K554 130 aa8.94□□□□□ -0.98
HLA-DMB-258ENST00000418107 J3QQQ9 107 aa8.94□□□□□ -0.98
HLA-DMB-258ENST00000418107 CRPP02741 224 aa8.94□□□□□ -0.98
HLA-DMB-258ENST00000418107 IGHV1-58A0A0C4DH39 117 aa8.93□□□□□ -0.98
HLA-DMB-258ENST00000418107 XCL1P47992 114 aa8.93□□□□□ -0.98
HLA-DMB-258ENST00000418107 MAPKAPK5-AS1Q8N8E1 139 aa8.93□□□□□ -0.98
HLA-DMB-258ENST00000418107 MRPS16Q9Y3D3 137 aaKnown RBP8.93□□□□□ -0.98
HLA-DMB-258ENST00000418107 IGLV10-54A0A075B6I4 117 aa8.92□□□□□ -0.98
HLA-DMB-258ENST00000418107 SCGB1D4Q6XE38 83 aa8.92□□□□□ -0.98
HLA-DMB-258ENST00000418107 UBE2WQ96B02 151 aa8.92□□□□□ -0.98
HLA-DMB-258ENST00000418107 SIVA1O15304 175 aa8.91□□□□□ -0.98
HLA-DMB-258ENST00000418107 C5orf38Q86SI9 138 aa8.91□□□□□ -0.98
HLA-DMB-258ENST00000418107 UBE2DNLQ8IWF7 75 aa8.91□□□□□ -0.98
HLA-DMB-258ENST00000418107 CHCHD10Q8WYQ3 142 aaPredicted RBP8.91□□□□□ -0.98
HLA-DMB-258ENST00000418107 LINC00588Q9Y4M8 146 aa8.91□□□□□ -0.98
HLA-DMB-258ENST00000418107 APOBP04114 4563 aaKnown RBP8.91□□□□□ -0.98
HLA-DMB-258ENST00000418107 TSPEAR-AS2P59090 65 aa8.9□□□□□ -0.98
HLA-DMB-258ENST00000418107 BATFQ16520 125 aa8.9□□□□□ -0.98
HLA-DMB-258ENST00000418107 Q6ZR54 194 aa8.9□□□□□ -0.98
HLA-DMB-258ENST00000418107 C2orf91Q6ZV80 131 aa8.9□□□□□ -0.98
HLA-DMB-258ENST00000418107 M0R143 59 aa8.89□□□□□ -0.99
HLA-DMB-258ENST00000418107 LINC01556Q5JQF7 62 aa8.89□□□□□ -0.99
HLA-DMB-258ENST00000418107 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
HLA-DMB-258ENST00000418107 MALP21145 153 aa8.88□□□□□ -0.99
HLA-DMB-258ENST00000418107 HINT1P49773 126 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMB-258ENST00000418107 CD164L2Q6UWJ8 174 aa8.88□□□□□ -0.99
HLA-DMB-258ENST00000418107 TOMM7Q9P0U1 55 aa8.88□□□□□ -0.99
HLA-DMB-258ENST00000418107 HIGD1BQ9P298 99 aa8.88□□□□□ -0.99
HLA-DMB-258ENST00000418107 NDUFA12Q9UI09 145 aa8.88□□□□□ -0.99
HLA-DMB-258ENST00000418107 A0A087WZ39 114 aa8.87□□□□□ -0.99
HLA-DMB-258ENST00000418107 TRAV8-4A0A0B4J246 113 aa8.87□□□□□ -0.99
HLA-DMB-258ENST00000418107 IGHV3OR16-9A0A0B4J2B5 98 aa8.87□□□□□ -0.99
HLA-DMB-258ENST00000418107 GAGE12HA6NDE8 117 aa8.87□□□□□ -0.99
HLA-DMB-258ENST00000418107 COX7A2LO14548 114 aa8.87□□□□□ -0.99
HLA-DMB-258ENST00000418107 ENHOQ6UWT2 76 aa8.87□□□□□ -0.99
HLA-DMB-258ENST00000418107 IGLV5-39A0A0G2JS06 123 aa8.86□□□□□ -0.99
HLA-DMB-258ENST00000418107 DNAH10OSP0CZ25 163 aa8.86□□□□□ -0.99
HLA-DMB-258ENST00000418107 HSD52Q0P140 79 aa8.86□□□□□ -0.99
HLA-DMB-258ENST00000418107 MIAQ16674 131 aa8.86□□□□□ -0.99
HLA-DMB-258ENST00000418107 C1orf134Q5TEV5 83 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms