RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 Q6ZN92 141 aa8.11□□□□□ -1.11
SKA1-203ENST00000417656 TEX43Q6ZNM6 134 aa8.11□□□□□ -1.11
SKA1-203ENST00000417656 AP5S1Q9NUS5 200 aa8.11□□□□□ -1.11
SKA1-203ENST00000417656 GVQW2A0A096LPI5 108 aaPredicted RBP8.1□□□□□ -1.11
SKA1-203ENST00000417656 IGHV1-58A0A0C4DH39 117 aa8.1□□□□□ -1.11
SKA1-203ENST00000417656 COX7A2LO14548 114 aa8.1□□□□□ -1.11
SKA1-203ENST00000417656 TRGC2P03986 189 aa8.1□□□□□ -1.11
SKA1-203ENST00000417656 NPSP0C0P6 89 aa8.1□□□□□ -1.11
SKA1-203ENST00000417656 SCGB3A1Q96QR1 104 aa8.1□□□□□ -1.11
SKA1-203ENST00000417656 TIMM17AQ99595 171 aa8.1□□□□□ -1.11
SKA1-203ENST00000417656 C2orf88Q9BSF0 95 aa8.1□□□□□ -1.11
SKA1-203ENST00000417656 HSPG2P98160 4391 aa8.09□□□□□ -1.11
SKA1-203ENST00000417656 A0A096LNJ9 63 aa8.09□□□□□ -1.11
SKA1-203ENST00000417656 COLCA2A8K830 154 aa8.09□□□□□ -1.11
SKA1-203ENST00000417656 MALP21145 153 aa8.09□□□□□ -1.11
SKA1-203ENST00000417656 UBE2D1P51668 147 aa8.09□□□□□ -1.11
SKA1-203ENST00000417656 CNBPP62633 177 aaKnown RBP8.09□□□□□ -1.11
SKA1-203ENST00000417656 HAMPP81172 84 aa8.09□□□□□ -1.11
SKA1-203ENST00000417656 C5orf38Q86SI9 138 aa8.09□□□□□ -1.11
SKA1-203ENST00000417656 AMELXQ99217 191 aa8.09□□□□□ -1.11
SKA1-203ENST00000417656 FAM229AH3BQW9 127 aa8.08□□□□□ -1.12
SKA1-203ENST00000417656 ATP6V1G1O75348 118 aa8.08□□□□□ -1.12
SKA1-203ENST00000417656 SLPIP03973 132 aa8.08□□□□□ -1.12
SKA1-203ENST00000417656 LINC00614P0C842 121 aa8.08□□□□□ -1.12
SKA1-203ENST00000417656 PMCHL1Q16048 86 aa8.08□□□□□ -1.12
SKA1-203ENST00000417656 LINC00242Q5T6M2 205 aa8.08□□□□□ -1.12
SKA1-203ENST00000417656 ERASQ7Z444 233 aa8.08□□□□□ -1.12
SKA1-203ENST00000417656 LINC00526Q96FQ7 95 aa8.08□□□□□ -1.12
SKA1-203ENST00000417656 VCX2Q9H322 139 aa8.08□□□□□ -1.12
SKA1-203ENST00000417656 FAM30AQ9NZY2 134 aa8.08□□□□□ -1.12
SKA1-203ENST00000417656 IGHV3OR16-9A0A0B4J2B5 98 aa8.07□□□□□ -1.12
SKA1-203ENST00000417656 HBDP02042 147 aa8.07□□□□□ -1.12
SKA1-203ENST00000417656 RAB5BP61020 215 aa8.07□□□□□ -1.12
SKA1-203ENST00000417656 PAPPA-AS1Q5QFB9 102 aa8.07□□□□□ -1.12
SKA1-203ENST00000417656 DNAH8Q96JB1 4490 aa8.07□□□□□ -1.12
SKA1-203ENST00000417656 LINC01549A6NIU2 74 aa8.06□□□□□ -1.12
SKA1-203ENST00000417656 XGP55808 180 aa8.06□□□□□ -1.12
SKA1-203ENST00000417656 COX6A2Q02221 97 aa8.06□□□□□ -1.12
SKA1-203ENST00000417656 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
SKA1-203ENST00000417656 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.05□□□□□ -1.12
SKA1-203ENST00000417656 APOMO95445 188 aa8.05□□□□□ -1.12
SKA1-203ENST00000417656 SPAG11BQ08648 103 aa8.05□□□□□ -1.12
SKA1-203ENST00000417656 Q6ZSA8 131 aa8.05□□□□□ -1.12
SKA1-203ENST00000417656 IGLV4-69A0A075B6H9 119 aa8.04□□□□□ -1.12
SKA1-203ENST00000417656 ZNF561-AS1K7EIQ3 104 aa8.04□□□□□ -1.12
SKA1-203ENST00000417656 BAGE3Q86Y29 109 aa8.04□□□□□ -1.12
SKA1-203ENST00000417656 ORAOV1Q8WV07 137 aa8.04□□□□□ -1.12
SKA1-203ENST00000417656 CHCHD1Q96BP2 118 aaKnown RBP8.04□□□□□ -1.12
SKA1-203ENST00000417656 IGHV3-64A0A075B6Q5 118 aa8.03□□□□□ -1.12
SKA1-203ENST00000417656 A0A087WZ39 114 aa8.03□□□□□ -1.12
SKA1-203ENST00000417656 A0A0J9YXV3 536 aa8.03□□□□□ -1.12
SKA1-203ENST00000417656 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.03□□□□□ -1.12
SKA1-203ENST00000417656 PDZD11Q5EBL8 140 aa8.03□□□□□ -1.12
SKA1-203ENST00000417656 FAM19A3Q7Z5A8 133 aa8.03□□□□□ -1.12
SKA1-203ENST00000417656 CARD19Q96LW7 228 aa8.03□□□□□ -1.12
SKA1-203ENST00000417656 KRTAP17-1Q9BYP8 105 aa8.03□□□□□ -1.12
SKA1-203ENST00000417656 HSBP1O75506 76 aa8.02□□□□□ -1.13
SKA1-203ENST00000417656 LINC00310P59036 64 aa8.02□□□□□ -1.13
SKA1-203ENST00000417656 PMVKQ15126 192 aa8.02□□□□□ -1.13
SKA1-203ENST00000417656 OR10D4PQ8NGN7 298 aa8.02□□□□□ -1.13
SKA1-203ENST00000417656 CST9LQ9H4G1 147 aa8.02□□□□□ -1.13
SKA1-203ENST00000417656 GEMIN7Q9H840 131 aaKnown RBP8.02□□□□□ -1.13
SKA1-203ENST00000417656 SERF1AO75920 110 aa8.01□□□□□ -1.13
SKA1-203ENST00000417656 HERVK_113P63121 156 aa8.01□□□□□ -1.13
SKA1-203ENST00000417656 SEC11AP67812 179 aa8.01□□□□□ -1.13
SKA1-203ENST00000417656 CTAG1AP78358 180 aa8.01□□□□□ -1.13
SKA1-203ENST00000417656 SYCNQ0VAF6 134 aa8.01□□□□□ -1.13
SKA1-203ENST00000417656 SDIM1Q6ZPB5 146 aa8.01□□□□□ -1.13
SKA1-203ENST00000417656 Q6ZRU5 148 aa8.01□□□□□ -1.13
SKA1-203ENST00000417656 SCXQ7RTU7 201 aa8.01□□□□□ -1.13
SKA1-203ENST00000417656 CAMK2N2Q96S95 79 aa8.01□□□□□ -1.13
SKA1-203ENST00000417656 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.01□□□□□ -1.13
SKA1-203ENST00000417656 PANO1I0J062 215 aa8□□□□□ -1.13
SKA1-203ENST00000417656 ATP5LO75964 103 aa8□□□□□ -1.13
SKA1-203ENST00000417656 CHTF8P0CG12 524 aa8□□□□□ -1.13
SKA1-203ENST00000417656 NDUFA6P56556 154 aa8□□□□□ -1.13
SKA1-203ENST00000417656 FAM19A2Q8N3H0 131 aa8□□□□□ -1.13
SKA1-203ENST00000417656 LINC00469Q8N7U9 141 aa8□□□□□ -1.13
SKA1-203ENST00000417656 C2orf48Q96LS8 159 aa8□□□□□ -1.13
SKA1-203ENST00000417656 CDKN2A-AS1Q9UH64 79 aa8□□□□□ -1.13
SKA1-203ENST00000417656 TINCRA0A1B0GVN0 87 aa7.99□□□□□ -1.13
SKA1-203ENST00000417656 S100A1P23297 94 aa7.99□□□□□ -1.13
SKA1-203ENST00000417656 LINC01561Q8N1V8 128 aa7.99□□□□□ -1.13
SKA1-203ENST00000417656 CHAC1Q9BUX1 264 aa7.99□□□□□ -1.13
SKA1-203ENST00000417656 SMR3BP02814 79 aaPredicted RBP7.98□□□□□ -1.13
SKA1-203ENST00000417656 KRTAP19-1Q8IUB9 90 aa7.98□□□□□ -1.13
SKA1-203ENST00000417656 Q8N1X5 172 aa7.98□□□□□ -1.13
SKA1-203ENST00000417656 CIRBP-AS1Q8TBR5 109 aa7.98□□□□□ -1.13
SKA1-203ENST00000417656 KRTAP9-9Q9BYP9 154 aa7.98□□□□□ -1.13
SKA1-203ENST00000417656 KRTAP9-4Q9BYQ2 154 aa7.98□□□□□ -1.13
SKA1-203ENST00000417656 IGLV5-45A0A087WSX0 123 aa7.97□□□□□ -1.13
SKA1-203ENST00000417656 A0A096LNI7 61 aa7.97□□□□□ -1.13
SKA1-203ENST00000417656 IGKV2-24A0A0C4DH68 120 aa7.97□□□□□ -1.13
SKA1-203ENST00000417656 NDUFA1O15239 70 aa7.97□□□□□ -1.13
SKA1-203ENST00000417656 NUPR1O60356 82 aa7.97□□□□□ -1.13
SKA1-203ENST00000417656 HIST1H2BKO60814 126 aa7.97□□□□□ -1.13
SKA1-203ENST00000417656 HIST1H2BJP06899 126 aa7.97□□□□□ -1.13
SKA1-203ENST00000417656 IGLC3P0DOY3 106 aa7.97□□□□□ -1.13
SKA1-203ENST00000417656 HIST1H2BOP23527 126 aa7.97□□□□□ -1.13
SKA1-203ENST00000417656 HIST1H2BBP33778 126 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms