RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 Q8N2B8 174 aa9.2□□□□□ -0.94
LRRTM1-205ENST00000417012 SMIM1B2RUZ4 78 aa9.19□□□□□ -0.94
LRRTM1-205ENST00000417012 ACYP1P07311 99 aa9.19□□□□□ -0.94
LRRTM1-205ENST00000417012 TRAV13-1A0A0B4J241 112 aa9.19□□□□□ -0.94
LRRTM1-205ENST00000417012 TRBV7-7A0A0K0K1E9 115 aa9.19□□□□□ -0.94
LRRTM1-205ENST00000417012 A0A1W2PRX2 142 aa9.19□□□□□ -0.94
LRRTM1-205ENST00000417012 TRAV25A0A0B4J276 109 aa9.18□□□□□ -0.94
LRRTM1-205ENST00000417012 HELZ2Q9BYK8 2649 aaKnown RBP9.18□□□□□ -0.94
LRRTM1-205ENST00000417012 LINC00694P0DN24 101 aa9.18□□□□□ -0.94
LRRTM1-205ENST00000417012 RPL36AP83881 106 aaKnown RBP9.18□□□□□ -0.94
LRRTM1-205ENST00000417012 SOSTDC1Q6X4U4 206 aa9.18□□□□□ -0.94
LRRTM1-205ENST00000417012 C4orf3Q8WVX3 66 aa9.18□□□□□ -0.94
LRRTM1-205ENST00000417012 RPL36ALQ969Q0 106 aaKnown RBP9.18□□□□□ -0.94
LRRTM1-205ENST00000417012 C2CD3Q4AC94 2353 aa9.18□□□□□ -0.94
LRRTM1-205ENST00000417012 TRGV1A0A0A0MS02 117 aa9.17□□□□□ -0.94
LRRTM1-205ENST00000417012 SMIM9A6NGZ8 99 aa9.17□□□□□ -0.94
LRRTM1-205ENST00000417012 XCL2Q9UBD3 114 aa9.17□□□□□ -0.94
LRRTM1-205ENST00000417012 NDUFA7O95182 113 aa9.17□□□□□ -0.94
LRRTM1-205ENST00000417012 FAM19A3Q7Z5A8 133 aa9.17□□□□□ -0.94
LRRTM1-205ENST00000417012 DNAJC9-AS1A6NH13 148 aa9.16□□□□□ -0.94
LRRTM1-205ENST00000417012 ESM1Q9NQ30 184 aa9.16□□□□□ -0.94
LRRTM1-205ENST00000417012 TRACP01848 142 aa9.16□□□□□ -0.94
LRRTM1-205ENST00000417012 TRBV10-1A0A0K0K1A3 114 aa9.15□□□□□ -0.94
LRRTM1-205ENST00000417012 K7EQD1 137 aa9.15□□□□□ -0.94
LRRTM1-205ENST00000417012 DAZ2Q13117 558 aaKnown RBP9.15□□□□□ -0.94
LRRTM1-205ENST00000417012 DEFB114Q30KQ6 69 aa9.15□□□□□ -0.94
LRRTM1-205ENST00000417012 DAZ4Q86SG3 579 aaKnown RBP9.15□□□□□ -0.94
LRRTM1-205ENST00000417012 CHCHD5Q9BSY4 110 aa9.15□□□□□ -0.94
LRRTM1-205ENST00000417012 DAZ3Q9NR90 486 aaKnown RBP9.15□□□□□ -0.94
LRRTM1-205ENST00000417012 JMJD1CQ15652 2540 aa9.15□□□□□ -0.94
LRRTM1-205ENST00000417012 IMUPQ9GZP8 106 aa9.14□□□□□ -0.95
LRRTM1-205ENST00000417012 STHQ8IWL8 128 aa9.14□□□□□ -0.95
LRRTM1-205ENST00000417012 BAALC-AS2P0C853 105 aa9.13□□□□□ -0.95
LRRTM1-205ENST00000417012 NTM-AS1Q6ZSK4 140 aa9.13□□□□□ -0.95
LRRTM1-205ENST00000417012 FAM236AA0A1B0GUQ0 79 aa9.13□□□□□ -0.95
LRRTM1-205ENST00000417012 FAM236BA0A1B0GV22 79 aa9.13□□□□□ -0.95
LRRTM1-205ENST00000417012 F5H768 121 aa9.13□□□□□ -0.95
LRRTM1-205ENST00000417012 CDC42SE2Q9NRR3 84 aa9.13□□□□□ -0.95
LRRTM1-205ENST00000417012 SETXQ7Z333 2677 aaKnown RBP9.13□□□□□ -0.95
LRRTM1-205ENST00000417012 UBE2L6O14933 153 aa9.12□□□□□ -0.95
LRRTM1-205ENST00000417012 LINC00643Q86TS7 51 aa9.12□□□□□ -0.95
LRRTM1-205ENST00000417012 C1orf158Q8N1D5 194 aa9.12□□□□□ -0.95
LRRTM1-205ENST00000417012 IL17DQ8TAD2 202 aa9.12□□□□□ -0.95
LRRTM1-205ENST00000417012 ANK3Q12955 4377 aaKnown RBP9.12□□□□□ -0.95
LRRTM1-205ENST00000417012 CRPP02741 224 aa9.11□□□□□ -0.95
LRRTM1-205ENST00000417012 ODF3L2Q3SX64 289 aa9.11□□□□□ -0.95
LRRTM1-205ENST00000417012 Q6ZTI0 123 aa9.11□□□□□ -0.95
LRRTM1-205ENST00000417012 FAM19A5Q7Z5A7 132 aaPredicted RBP9.11□□□□□ -0.95
LRRTM1-205ENST00000417012 TMEM126AQ9H061 195 aa9.11□□□□□ -0.95
LRRTM1-205ENST00000417012 TRAV13-2A0A0B4J235 113 aa9.11□□□□□ -0.95
LRRTM1-205ENST00000417012 FAM222AQ5U5X8 452 aa9.11□□□□□ -0.95
LRRTM1-205ENST00000417012 PF4P02776 101 aa9.1□□□□□ -0.95
LRRTM1-205ENST00000417012 INAFM2P0DMQ5 153 aa9.1□□□□□ -0.95
LRRTM1-205ENST00000417012 SMCR5Q8TEV8 140 aa9.1□□□□□ -0.95
LRRTM1-205ENST00000417012 FAM218AQ96MZ4 157 aa9.1□□□□□ -0.95
LRRTM1-205ENST00000417012 TMEM243Q9BU79 118 aa9.1□□□□□ -0.95
LRRTM1-205ENST00000417012 FASNP49327 2511 aaKnown RBP9.1□□□□□ -0.95
LRRTM1-205ENST00000417012 UNC79Q9P2D8 2635 aa9.1□□□□□ -0.95
LRRTM1-205ENST00000417012 C9orf153Q5TBE3 101 aa9.1□□□□□ -0.95
LRRTM1-205ENST00000417012 KRTAP1-1Q07627 177 aa9.09□□□□□ -0.95
LRRTM1-205ENST00000417012 TMEM86BQ8N661 226 aa9.09□□□□□ -0.95
LRRTM1-205ENST00000417012 KLK5Q9Y337 293 aaPredicted RBP9.09□□□□□ -0.95
LRRTM1-205ENST00000417012 CCL24O00175 119 aa9.08□□□□□ -0.96
LRRTM1-205ENST00000417012 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
LRRTM1-205ENST00000417012 MIR7-3HGQ8N6C7 128 aa9.07□□□□□ -0.96
LRRTM1-205ENST00000417012 COX7B2Q8TF08 81 aa9.07□□□□□ -0.96
LRRTM1-205ENST00000417012 OVOL2Q9BRP0 275 aa9.07□□□□□ -0.96
LRRTM1-205ENST00000417012 Q9HAA7 133 aa9.07□□□□□ -0.96
LRRTM1-205ENST00000417012 GAGE2AQ6NT46 116 aa9.07□□□□□ -0.96
LRRTM1-205ENST00000417012 SND1-IT1Q9HBX3 110 aa9.07□□□□□ -0.96
LRRTM1-205ENST00000417012 TOMM7Q9P0U1 55 aa9.07□□□□□ -0.96
LRRTM1-205ENST00000417012 DNAL4O96015 105 aa9.07□□□□□ -0.96
LRRTM1-205ENST00000417012 MALP21145 153 aa9.07□□□□□ -0.96
LRRTM1-205ENST00000417012 NOP10Q9NPE3 64 aaKnown RBP9.07□□□□□ -0.96
LRRTM1-205ENST00000417012 OR13C6PQ8NH95 151 aa9.06□□□□□ -0.96
LRRTM1-205ENST00000417012 C22orf24Q9Y442 160 aa9.06□□□□□ -0.96
LRRTM1-205ENST00000417012 KMT2BQ9UMN6 2715 aaPredicted RBP9.06□□□□□ -0.96
LRRTM1-205ENST00000417012 SDIM1Q6ZPB5 146 aa9.06□□□□□ -0.96
LRRTM1-205ENST00000417012 LINC00337Q8N6G1 96 aa9.06□□□□□ -0.96
LRRTM1-205ENST00000417012 LINC01006Q8NI28 216 aa9.06□□□□□ -0.96
LRRTM1-205ENST00000417012 PLA2G2AP14555 144 aa9.05□□□□□ -0.96
LRRTM1-205ENST00000417012 HECTD1Q9ULT8 2610 aa9.05□□□□□ -0.96
LRRTM1-205ENST00000417012 GCN1Q92616 2671 aaKnown RBP9.05□□□□□ -0.96
LRRTM1-205ENST00000417012 J3KT08 172 aa9.05□□□□□ -0.96
LRRTM1-205ENST00000417012 SMR3AQ99954 134 aa9.05□□□□□ -0.96
LRRTM1-205ENST00000417012 NOTCH2Q04721 2471 aa9.05□□□□□ -0.96
LRRTM1-205ENST00000417012 TRGV2A0A075B6R0 118 aa9.05□□□□□ -0.96
LRRTM1-205ENST00000417012 IGKV3OR2-268A0A0C4DH90 116 aa9.05□□□□□ -0.96
LRRTM1-205ENST00000417012 ATP5G1P05496 136 aa9.05□□□□□ -0.96
LRRTM1-205ENST00000417012 CXCL5P42830 114 aa9.05□□□□□ -0.96
LRRTM1-205ENST00000417012 LINC00158P58513 81 aa9.05□□□□□ -0.96
LRRTM1-205ENST00000417012 IGKV2-28A0A075B6P5 120 aa9.04□□□□□ -0.96
LRRTM1-205ENST00000417012 IGKV2D-28P01615 120 aa9.04□□□□□ -0.96
LRRTM1-205ENST00000417012 WFDC10AQ9H1F0 79 aa9.04□□□□□ -0.96
LRRTM1-205ENST00000417012 SMIM11BQ8TCY0 68 aa9.03□□□□□ -0.96
LRRTM1-205ENST00000417012 LOC100131303A0A0U1RQF7 123 aa9.02□□□□□ -0.96
LRRTM1-205ENST00000417012 J3QKU1 62 aa9.02□□□□□ -0.96
LRRTM1-205ENST00000417012 C3orf22Q8N5N4 141 aa9.02□□□□□ -0.96
LRRTM1-205ENST00000417012 C16orf74Q96GX8 76 aa9.02□□□□□ -0.96
LRRTM1-205ENST00000417012 HIVEP2P31629 2446 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms