RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 COX6A2Q02221 97 aa10.68□□□□□ -0.7
NCKIPSD-204ENST00000416649 UBE2D4Q9Y2X8 147 aa10.68□□□□□ -0.7
NCKIPSD-204ENST00000416649 OXTP01178 125 aa10.67□□□□□ -0.7
NCKIPSD-204ENST00000416649 KLK9Q2XQG4 91 aa10.67□□□□□ -0.7
NCKIPSD-204ENST00000416649 GCN1Q92616 2671 aaKnown RBP10.67□□□□□ -0.7
NCKIPSD-204ENST00000416649 HIST1H4AP62805 103 aaKnown RBP10.66□□□□□ -0.7
NCKIPSD-204ENST00000416649 BEAN1Q3B7T3 259 aa10.66□□□□□ -0.7
NCKIPSD-204ENST00000416649 C9orf129Q5T035 196 aaKnown RBP10.66□□□□□ -0.7
NCKIPSD-204ENST00000416649 MOB4Q9Y3A3 225 aa10.66□□□□□ -0.7
NCKIPSD-204ENST00000416649 H3BUX3 64 aa10.66□□□□□ -0.7
NCKIPSD-204ENST00000416649 F5H768 121 aa10.65□□□□□ -0.7
NCKIPSD-204ENST00000416649 TMEM258P61165 79 aa10.65□□□□□ -0.7
NCKIPSD-204ENST00000416649 SERP2Q8N6R1 65 aa10.65□□□□□ -0.7
NCKIPSD-204ENST00000416649 MSMBP08118 114 aa10.65□□□□□ -0.7
NCKIPSD-204ENST00000416649 CHCHD7Q9BUK0 85 aa10.64□□□□□ -0.71
NCKIPSD-204ENST00000416649 Q6ZSN1 163 aa10.64□□□□□ -0.71
NCKIPSD-204ENST00000416649 LINC00846Q9NV44 126 aa10.64□□□□□ -0.71
NCKIPSD-204ENST00000416649 USP17L23D6RBM5 183 aa10.63□□□□□ -0.71
NCKIPSD-204ENST00000416649 AKAP9Q99996 3911 aa10.63□□□□□ -0.71
NCKIPSD-204ENST00000416649 SNRPD3P62318 126 aaKnown RBP10.62□□□□□ -0.71
NCKIPSD-204ENST00000416649 NBEAL2Q6ZNJ1 2754 aa10.61□□□□□ -0.71
NCKIPSD-204ENST00000416649 UNC79Q9P2D8 2635 aa10.61□□□□□ -0.71
NCKIPSD-204ENST00000416649 A0A087WYN8 130 aa10.61□□□□□ -0.71
NCKIPSD-204ENST00000416649 CRPP02741 224 aa10.61□□□□□ -0.71
NCKIPSD-204ENST00000416649 FAM222AQ5U5X8 452 aa10.61□□□□□ -0.71
NCKIPSD-204ENST00000416649 LINC01561Q8N1V8 128 aa10.6□□□□□ -0.71
NCKIPSD-204ENST00000416649 WFDC9Q8NEX5 89 aa10.6□□□□□ -0.71
NCKIPSD-204ENST00000416649 USMG5Q96IX5 58 aa10.6□□□□□ -0.71
NCKIPSD-204ENST00000416649 NCR3O14931 201 aa10.6□□□□□ -0.71
NCKIPSD-204ENST00000416649 WIPF1O43516 503 aa10.6□□□□□ -0.71
NCKIPSD-204ENST00000416649 COPS9Q8WXC6 57 aa10.6□□□□□ -0.71
NCKIPSD-204ENST00000416649 IGHV3OR16-12A0A075B7B8 117 aa10.59□□□□□ -0.71
NCKIPSD-204ENST00000416649 B4DSR2 109 aa10.59□□□□□ -0.71
NCKIPSD-204ENST00000416649 SLPIP03973 132 aa10.59□□□□□ -0.71
NCKIPSD-204ENST00000416649 C19orf54Q5BKX5 351 aa10.59□□□□□ -0.71
NCKIPSD-204ENST00000416649 HILS1P60008 231 aa10.58□□□□□ -0.72
NCKIPSD-204ENST00000416649 UPK3BQ9BT76 320 aa10.58□□□□□ -0.72
NCKIPSD-204ENST00000416649 LINC00242Q5T6M2 205 aa10.58□□□□□ -0.72
NCKIPSD-204ENST00000416649 IGHV4-59P01825 116 aa10.57□□□□□ -0.72
NCKIPSD-204ENST00000416649 RBMY1A1P0DJD3 496 aaKnown RBP10.57□□□□□ -0.72
NCKIPSD-204ENST00000416649 RBMY1CP0DJD4 496 aa10.57□□□□□ -0.72
NCKIPSD-204ENST00000416649 RBMY1FQ15415 496 aaKnown RBP10.57□□□□□ -0.72
NCKIPSD-204ENST00000416649 TOMM7Q9P0U1 55 aa10.57□□□□□ -0.72
NCKIPSD-204ENST00000416649 TRAV23DV6A0A075B6W5 121 aa10.57□□□□□ -0.72
NCKIPSD-204ENST00000416649 SMIM1B2RUZ4 78 aa10.57□□□□□ -0.72
NCKIPSD-204ENST00000416649 LECT2O14960 151 aa10.57□□□□□ -0.72
NCKIPSD-204ENST00000416649 FHL2Q14192 279 aa10.57□□□□□ -0.72
NCKIPSD-204ENST00000416649 Q5XG85 94 aa10.57□□□□□ -0.72
NCKIPSD-204ENST00000416649 DEFB112Q30KQ8 113 aa10.56□□□□□ -0.72
NCKIPSD-204ENST00000416649 Q6JHZ5 121 aa10.56□□□□□ -0.72
NCKIPSD-204ENST00000416649 LINC00337Q8N6G1 96 aa10.56□□□□□ -0.72
NCKIPSD-204ENST00000416649 FLNBO75369 2602 aaKnown RBP10.55□□□□□ -0.72
NCKIPSD-204ENST00000416649 IGLV5-39A0A0G2JS06 123 aa10.55□□□□□ -0.72
NCKIPSD-204ENST00000416649 Q96MF0 132 aa10.55□□□□□ -0.72
NCKIPSD-204ENST00000416649 TRAV13-2A0A0B4J235 113 aa10.54□□□□□ -0.72
NCKIPSD-204ENST00000416649 GHRHP01286 108 aa10.54□□□□□ -0.72
NCKIPSD-204ENST00000416649 MIR7-3HGQ8N6C7 128 aa10.54□□□□□ -0.72
NCKIPSD-204ENST00000416649 IGKV3OR2-268A0A0C4DH90 116 aa10.54□□□□□ -0.72
NCKIPSD-204ENST00000416649 SMIM11BQ8TCY0 68 aa10.54□□□□□ -0.72
NCKIPSD-204ENST00000416649 SND1-IT1Q9HBX3 110 aa10.54□□□□□ -0.72
NCKIPSD-204ENST00000416649 IGLV5-45A0A087WSX0 123 aa10.54□□□□□ -0.72
NCKIPSD-204ENST00000416649 C20orf197Q8N268 126 aa10.54□□□□□ -0.72
NCKIPSD-204ENST00000416649 RPL28P46779 137 aaKnown RBP10.53□□□□□ -0.72
NCKIPSD-204ENST00000416649 LINC00158P58513 81 aa10.52□□□□□ -0.72
NCKIPSD-204ENST00000416649 LINC01356Q8N9X3 169 aa10.52□□□□□ -0.72
NCKIPSD-204ENST00000416649 KMT2BQ9UMN6 2715 aaPredicted RBP10.52□□□□□ -0.73
NCKIPSD-204ENST00000416649 K7EQG2 157 aa10.52□□□□□ -0.73
NCKIPSD-204ENST00000416649 RPL36AP83881 106 aaKnown RBP10.52□□□□□ -0.73
NCKIPSD-204ENST00000416649 RPL36ALQ969Q0 106 aaKnown RBP10.52□□□□□ -0.73
NCKIPSD-204ENST00000416649 TMEM243Q9BU79 118 aa10.52□□□□□ -0.73
NCKIPSD-204ENST00000416649 CFHR3Q02985 330 aa10.51□□□□□ -0.73
NCKIPSD-204ENST00000416649 DEFB136Q30KP8 78 aa10.51□□□□□ -0.73
NCKIPSD-204ENST00000416649 CR1P17927 2039 aa10.51□□□□□ -0.73
NCKIPSD-204ENST00000416649 WFDC11Q8NEX6 87 aa10.51□□□□□ -0.73
NCKIPSD-204ENST00000416649 IGKV2-28A0A075B6P5 120 aa10.5□□□□□ -0.73
NCKIPSD-204ENST00000416649 IGKV2D-28P01615 120 aa10.5□□□□□ -0.73
NCKIPSD-204ENST00000416649 RNASE1P07998 156 aaKnown RBP10.5□□□□□ -0.73
NCKIPSD-204ENST00000416649 ZNF415Q09FC8 603 aa10.5□□□□□ -0.73
NCKIPSD-204ENST00000416649 DEFB113Q30KQ7 82 aa10.5□□□□□ -0.73
NCKIPSD-204ENST00000416649 FAM19A1Q7Z5A9 133 aa10.5□□□□□ -0.73
NCKIPSD-204ENST00000416649 K7EMT4 169 aa10.5□□□□□ -0.73
NCKIPSD-204ENST00000416649 RBMY1BA6NDE4 496 aaKnown RBP10.49□□□□□ -0.73
NCKIPSD-204ENST00000416649 RBMY1EA6NEQ0 496 aaKnown RBP10.49□□□□□ -0.73
NCKIPSD-204ENST00000416649 RBMY1DP0C7P1 496 aaKnown RBP10.49□□□□□ -0.73
NCKIPSD-204ENST00000416649 PFN2P35080 140 aa10.49□□□□□ -0.73
NCKIPSD-204ENST00000416649 DEFB131AP59861 70 aa10.49□□□□□ -0.73
NCKIPSD-204ENST00000416649 ENHOQ6UWT2 76 aa10.49□□□□□ -0.73
NCKIPSD-204ENST00000416649 A6NDX4 124 aa10.48□□□□□ -0.73
NCKIPSD-204ENST00000416649 A0A096LNT2 108 aa10.48□□□□□ -0.73
NCKIPSD-204ENST00000416649 PAX4O43316 350 aa10.48□□□□□ -0.73
NCKIPSD-204ENST00000416649 IGHV3-53P01767 116 aa10.48□□□□□ -0.73
NCKIPSD-204ENST00000416649 OVOL2Q9BRP0 275 aa10.48□□□□□ -0.73
NCKIPSD-204ENST00000416649 H3BUA1 57 aa10.47□□□□□ -0.73
NCKIPSD-204ENST00000416649 IGHV4-31P0DP07 118 aa10.47□□□□□ -0.73
NCKIPSD-204ENST00000416649 C11orf44Q8N8P7 122 aa10.47□□□□□ -0.73
NCKIPSD-204ENST00000416649 HIVEP2P31629 2446 aa10.47□□□□□ -0.73
NCKIPSD-204ENST00000416649 PDZD2O15018 2839 aa10.47□□□□□ -0.73
NCKIPSD-204ENST00000416649 PF4P02776 101 aa10.47□□□□□ -0.73
NCKIPSD-204ENST00000416649 DSCR9P59020 149 aa10.47□□□□□ -0.73
NCKIPSD-204ENST00000416649 KHDC1LQ5JSQ8 128 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms