RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 EPPK1P58107 5090 aaKnown RBP-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 DMXL2Q8TDJ6 3036 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 CMYA5Q8N3K9 4069 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 THOC2Q8NI27 1593 aaKnown RBP-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 SETBP1Q9Y6X0 1596 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 UBR4Q5T4S7 5183 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 SBF2Q86WG5 1849 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 PHIPQ8WWQ0 1821 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 KIF13AQ9H1H9 1805 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 EYSQ5T1H1 3165 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 FHAD1B1AJZ9 1412 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 SMG6Q86US8 1419 aaKnown RBP-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 NSD3Q9BZ95 1437 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 RYR3Q15413 4870 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 ABCC10Q5T3U5 1492 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 IFT140Q96RY7 1462 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 LRRC37AA6NMS7 1700 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 NRXN2Q9P2S2 1712 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 IFT172Q9UG01 1749 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 MARF1Q9Y4F3 1742 aaKnown RBP-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 I3L2K1 104 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 J3QR89 54 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 M0R135 149 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 SSSCA1O60232 199 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 MT1HL1P0DM35 61 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 COX8AP10176 69 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 COPZ1P61923 177 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 COX17Q14061 63 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 DEFB135Q30KP9 77 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 CFAP126Q5VTH2 177 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 BAGE3Q86Y29 109 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 DEFB123Q8N688 67 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 AMELXQ99217 191 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 PSMG3Q9BT73 122 aaPredicted RBP-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 TPT1P8Q9HAU6 139 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 TP53AIP1Q9HCN2 124 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 SCN3BQ9NY72 215 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 COPZ2Q9P299 210 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 PAPPA2Q9BXP8 1791 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 RANBP2P49792 3224 aaKnown RBP-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 KIAA1109Q2LD37 5005 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 ATMQ13315 3056 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 ADGRG4Q8IZF6 3080 aa-0.2□□□□□ -2.44
TRAPPC13-203ENST00000415825 ANKRD50Q9ULJ7 1429 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 VPS13BQ7Z7G8 4022 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 TIAM2Q8IVF5 1701 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 XRN1Q8IZH2 1706 aaKnown RBP-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 TRIOO75962 3097 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 NLRP1Q9C000 1473 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 SHANK2Q9UPX8 1470 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 RGPD8O14715 1765 aaPredicted RBP-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 RGPD2P0DJD1 1756 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 RGPD5Q99666 1765 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 RNF213Q63HN8 5207 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 FXYD6-FXYD2A0A087WZ82 144 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 TRBV6-1A0A0K0K1D8 114 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPAARA0A1B0GVQ0 90 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 A6NIN4 97 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 H0YGG7 62 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 GNG7O60262 68 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 SNCGO76070 127 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 PPP1R17O96001 155 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 SMIM6P0DI80 62 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 GUCA1AP43080 201 aaPredicted RBP-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 DEFA5Q01523 94 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 C10orf128Q5T292 105 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 RPL7L1Q6DKI1 246 aaKnown RBP-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 C9orf62Q8N4C0 152 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 KCNRGQ8N5I3 272 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 SMIM4Q8WVI0 70 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 TSLPQ969D9 159 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 USMG5Q96IX5 58 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 TMEM191AQ9H0A3 160 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 LINC00474Q9P2X8 69 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 ARHGEF5Q12774 1597 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 ERCC6L2Q5T890 1561 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 DIP2CQ9Y2E4 1556 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 CDK5RAP2Q96SN8 1893 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 LRP6O75581 1613 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 MYH8P13535 1937 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 MYOM1P52179 1685 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 HYDINQ4G0P3 5121 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 CRYBG3Q68DQ2 2970 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 PRDM2Q13029 1718 aa-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 EDC4Q6P2E9 1401 aaKnown RBP-0.21□□□□□ -2.44
TRAPPC13-203ENST00000415825 RYR2Q92736 4967 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 COL14A1Q05707 1796 aaKnown RBP-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 BCORQ6W2J9 1755 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 ZNF518AQ6AHZ1 1483 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 MRC2Q9UBG0 1479 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 PATJQ8NI35 1801 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 DOCK2Q92608 1830 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 MAP3K1Q13233 1512 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 CSMD1Q96PZ7 3565 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 DOCK1Q14185 1865 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 TCHHQ07283 1943 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 CICQ96RK0 1608 aaPredicted RBP-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 ALKQ9UM73 1620 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 TRAV13-2A0A0B4J235 113 aa-0.22□□□□□ -2.44
TRAPPC13-203ENST00000415825 PIGBOS1A0A0B4J2F0 54 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms