RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 CASQ1P31415 396 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 ATP5IP56385 69 aaPredicted RBP0.67□□□□□ -2.3
LINC00428-201ENST00000415620 RND3P61587 244 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 HERV-K104P63124 156 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 GNG5P63218 68 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 COTL1Q14019 142 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 IAH1Q2TAA2 248 aaPredicted RBP0.67□□□□□ -2.3
LINC00428-201ENST00000415620 C5orf47Q569G3 176 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 SPANXN5Q5MJ07 72 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 MIC13Q5XKP0 118 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 SOSTDC1Q6X4U4 206 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 TMEM91Q6ZNR0 172 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 ZFP82Q8N141 532 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 NKAPP1Q8N9T2 125 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 GLYATL2Q8WU03 294 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 APH1BQ8WW43 257 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 FXYD5Q96DB9 178 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 MGST2Q99735 147 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 MND1Q9BWT6 205 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 NMES1Q9C002 83 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 CCDC90BQ9GZT6 254 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 CDC42SE2Q9NRR3 84 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 V9GY05 133 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 TRAV13-1A0A0B4J241 112 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 RAB19A4D1S5 217 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 ERICH4A6NGS2 130 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 IFITM5A6NNB3 132 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 KRBOX1C9JBD0 128 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 MGPP08493 103 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 ZNF25P17030 456 aaPredicted RBP0.66□□□□□ -2.3
LINC00428-201ENST00000415620 TMBIM6P55061 237 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 TAS2R19P59542 299 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 SSTP61278 116 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 SMCO1Q147U7 214 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 GCSAMLQ5JQS6 135 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 DNLZQ5SXM8 178 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 PET117Q6UWS5 81 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 AKAP14Q86UN6 197 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 OR10AG1Q8NH19 301 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 FAM167A-AS1Q96KT0 104 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 CIB3Q96Q77 187 aaPredicted RBP0.66□□□□□ -2.3
LINC00428-201ENST00000415620 GABARAPL1Q9H0R8 117 aa0.66□□□□□ -2.3
LINC00428-201ENST00000415620 COLCA2A8K830 154 aa0.65□□□□□ -2.31
LINC00428-201ENST00000415620 A8MWL6 223 aa0.65□□□□□ -2.31
LINC00428-201ENST00000415620 FKBP6O75344 327 aa0.65□□□□□ -2.31
LINC00428-201ENST00000415620 AKR1C4P17516 323 aa0.65□□□□□ -2.31
LINC00428-201ENST00000415620 MYL12AP19105 171 aa0.65□□□□□ -2.31
LINC00428-201ENST00000415620 RCVRNP35243 200 aa0.65□□□□□ -2.31
LINC00428-201ENST00000415620 RPL29P47914 159 aaKnown RBP0.65□□□□□ -2.31
LINC00428-201ENST00000415620 MAGOHP61326 146 aaKnown RBP0.65□□□□□ -2.31
LINC00428-201ENST00000415620 WHAMMP3Q1A5X7 153 aa0.65□□□□□ -2.31
LINC00428-201ENST00000415620 SMUG1Q53HV7 270 aa0.65□□□□□ -2.31
LINC00428-201ENST00000415620 MIR17HGQ75NE6 70 aa0.65□□□□□ -2.31
LINC00428-201ENST00000415620 CLVS1Q8IUQ0 354 aaPredicted RBP0.65□□□□□ -2.31
LINC00428-201ENST00000415620 C12orf45Q8N5I9 185 aaPredicted RBP0.65□□□□□ -2.31
LINC00428-201ENST00000415620 OR1L4Q8NGR5 311 aa0.65□□□□□ -2.31
LINC00428-201ENST00000415620 CCDC59Q9P031 241 aaKnown RBP0.65□□□□□ -2.31
LINC00428-201ENST00000415620 RSL24D1Q9UHA3 163 aaKnown RBP0.65□□□□□ -2.31
LINC00428-201ENST00000415620 ANAPC10Q9UM13 185 aa0.65□□□□□ -2.31
LINC00428-201ENST00000415620 AP4S1Q9Y587 144 aa0.65□□□□□ -2.31
LINC00428-201ENST00000415620 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 OR7C2O60412 319 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 APCSP02743 223 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 CAMLGP49069 296 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 TAS2R46P59540 309 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 NCS1P62166 190 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 KLKP1Q107X0 134 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 Q5XG85 94 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 RASL11AQ6T310 242 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 WFDC13Q8IUB5 93 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 DEFB107AQ8IZN7 70 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 TERB2Q8NHR7 220 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 CCDC124Q96CT7 223 aaKnown RBP0.64□□□□□ -2.31
LINC00428-201ENST00000415620 ZNF625Q96I27 306 aaPredicted RBP0.64□□□□□ -2.31
LINC00428-201ENST00000415620 PFDN5Q99471 154 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 SIKE1Q9BRV8 207 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 NDFIP1Q9BT67 221 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 LYRM2Q9NU23 88 aaPredicted RBP0.64□□□□□ -2.31
LINC00428-201ENST00000415620 COPZ2Q9P299 210 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 EXTL2Q9UBQ6 330 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 STRAPQ9Y3F4 350 aaKnown RBP0.64□□□□□ -2.31
LINC00428-201ENST00000415620 ARL2-SNX15V9GYD0 113 aa0.64□□□□□ -2.31
LINC00428-201ENST00000415620 EFCAB10A6NFE3 127 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 H3BMQ9 156 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 SYNGR2O43760 224 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 CIB2O75838 187 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 METTL15P1P0C7V9 234 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 RAB5AP20339 215 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 CRIP1P50238 77 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 FABP5Q01469 135 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 DEFB116Q30KQ4 102 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 Q6ZUT4 128 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 LCA10Q71F78 164 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 PACRGLQ8N7B6 248 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 OR5H6Q8NGV6 325 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 NIT2Q9NQR4 276 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 CACFD1Q9UGQ2 172 aa0.63□□□□□ -2.31
LINC00428-201ENST00000415620 FABP5P3A8MUU1 101 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 MYL12BO14950 172 aa0.62□□□□□ -2.31
LINC00428-201ENST00000415620 SH2D1AO60880 128 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms