RNA–Protein interactions for RNA: ENST00000415569.5

GTDC1-208, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5

Gene GTDC1, Length 2,780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-208ENST00000415569 NOTCH1P46531 2555 aa3.07□□□□□ -1.92
GTDC1-208ENST00000415569 IGLV5-39A0A0G2JS06 123 aa3.07□□□□□ -1.92
GTDC1-208ENST00000415569 F5H768 121 aa3.07□□□□□ -1.92
GTDC1-208ENST00000415569 LITAFQ99732 161 aa3.07□□□□□ -1.92
GTDC1-208ENST00000415569 TMEM243Q9BU79 118 aa3.07□□□□□ -1.92
GTDC1-208ENST00000415569 SPANXB1Q9NS25 103 aaPredicted RBP3.07□□□□□ -1.92
GTDC1-208ENST00000415569 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 TRAV8-3A0A0A6YYJ7 113 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 IGHV1-58A0A0C4DH39 117 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 IGHV3-30-3P0DP02 117 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 CDKN2A-AS1Q9UH64 79 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 PRO0255Q9UI72 69 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 COL7A1Q02388 2944 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 PLECQ15149 4684 aaKnown RBP3.06□□□□□ -1.92
GTDC1-208ENST00000415569 IGLV4-60A0A075B6I1 120 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 C9orf118A6NHY6 69 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 G3V4G9 280 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 IGHV3-30P01768 117 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 IGHV3-30-5P0DP03 117 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 GCSHP23434 173 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 C3orf56Q8N813 242 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 PRKDCP78527 4128 aaKnown RBP3.06□□□□□ -1.92
GTDC1-208ENST00000415569 IGHV3-64A0A075B6Q5 118 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 A0A0J9YXY3 114 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 A6NDN8 102 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 K7ERJ3 54 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 CCL25O15444 150 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 SPINK8P0C7L1 97 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 TMEM101Q96IK0 257 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 RETNQ9HD89 108 aa3.06□□□□□ -1.92
GTDC1-208ENST00000415569 LYSTQ99698 3801 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 GAGE10A6NGK3 116 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 SMIM1B2RUZ4 78 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 GAGE6Q13070 117 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 C12orf74Q32Q52 190 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 ZFAND6Q6FIF0 208 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 DGAT2L7PQ6IED9 249 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 ATP6V0E2Q8NHE4 81 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 HIST1H4GQ99525 98 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 TRAV26-1A0A087WT03 109 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 A0A1B0GUV1 79 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 PAX4O43316 350 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 SMIM13P0DJ93 91 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 LGALS3P17931 250 aaKnown RBP3.05□□□□□ -1.92
GTDC1-208ENST00000415569 DAD1P61803 113 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 HERVK_113P63121 156 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 UBE2V1Q13404 147 aa3.05□□□□□ -1.92
GTDC1-208ENST00000415569 C11orf68Q9H3H3 251 aaKnown RBP3.05□□□□□ -1.92
GTDC1-208ENST00000415569 DNAH10Q8IVF4 4471 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 ATP5G1P05496 136 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 SPART-AS1P0CW21 52 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 SMAGPQ0VAQ4 97 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 ZNF625Q96I27 306 aaPredicted RBP3.04□□□□□ -1.92
GTDC1-208ENST00000415569 NHP2Q9NX24 153 aaKnown RBP3.04□□□□□ -1.92
GTDC1-208ENST00000415569 VPS13DQ5THJ4 4388 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 A0A096LPF7 62 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 TRAV13-1A0A0B4J241 112 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 IGHV3OR16-9A0A0B4J2B5 98 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 A0A1W2PPM0 123 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 UBE2L6O14933 153 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 NDUFA1O15239 70 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 ADAMTSL4-AS1Q5T5F5 129 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 AMMECR1LQ6DCA0 310 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 SCGB1D4Q6XE38 83 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 NAA38Q9BRA0 125 aaKnown RBP3.04□□□□□ -1.92
GTDC1-208ENST00000415569 SPANXDQ9BXN6 97 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 GEMIN7Q9H840 131 aaKnown RBP3.04□□□□□ -1.92
GTDC1-208ENST00000415569 SPANXCQ9NY87 97 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 NDUFA12Q9UI09 145 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 CSMD3Q7Z407 3707 aa3.04□□□□□ -1.92
GTDC1-208ENST00000415569 IGLL5B9A064 214 aa3.03□□□□□ -1.92
GTDC1-208ENST00000415569 H3BUT2 72 aa3.03□□□□□ -1.92
GTDC1-208ENST00000415569 KPRPQ5T749 579 aaPredicted RBP3.03□□□□□ -1.92
GTDC1-208ENST00000415569 RAB37Q96AX2 223 aa3.03□□□□□ -1.92
GTDC1-208ENST00000415569 CHCHD5Q9BSY4 110 aa3.03□□□□□ -1.92
GTDC1-208ENST00000415569 LINC00959A0A1B0GUT2 108 aa3.03□□□□□ -1.92
GTDC1-208ENST00000415569 TEX48A0A1B0GUV7 120 aa3.03□□□□□ -1.92
GTDC1-208ENST00000415569 K7EP34 96 aa3.03□□□□□ -1.92
GTDC1-208ENST00000415569 TIMM17BO60830 172 aa3.03□□□□□ -1.92
GTDC1-208ENST00000415569 CFC1BP0CG36 223 aa3.03□□□□□ -1.92
GTDC1-208ENST00000415569 CFC1P0CG37 223 aa3.03□□□□□ -1.92
GTDC1-208ENST00000415569 PTTG1IPP53801 180 aa3.02□□□□□ -1.93
GTDC1-208ENST00000415569 MGAM2Q2M2H8 2515 aa3.02□□□□□ -1.93
GTDC1-208ENST00000415569 STARD9Q9P2P6 4700 aa3.02□□□□□ -1.93
GTDC1-208ENST00000415569 A0A087WZ39 114 aa3.02□□□□□ -1.93
GTDC1-208ENST00000415569 H3BNG1 76 aa3.02□□□□□ -1.93
GTDC1-208ENST00000415569 K7EIL1 84 aa3.02□□□□□ -1.93
GTDC1-208ENST00000415569 SRSF9Q13242 221 aaKnown RBP eCLIP3.02□□□□□ -1.93
GTDC1-208ENST00000415569 VAMP3Q15836 100 aa3.02□□□□□ -1.93
GTDC1-208ENST00000415569 MIAQ16674 131 aa3.02□□□□□ -1.93
GTDC1-208ENST00000415569 MUSTN1Q8IVN3 82 aa3.02□□□□□ -1.93
GTDC1-208ENST00000415569 B5MCH6 92 aa3.01□□□□□ -1.93
GTDC1-208ENST00000415569 TSPAN13O95857 204 aa3.01□□□□□ -1.93
GTDC1-208ENST00000415569 MRPL23Q16540 153 aaKnown RBP3.01□□□□□ -1.93
GTDC1-208ENST00000415569 LELP1Q5T871 98 aa3.01□□□□□ -1.93
GTDC1-208ENST00000415569 Q6ZTC4 211 aa3.01□□□□□ -1.93
GTDC1-208ENST00000415569 TM2D3Q9BRN9 247 aa3.01□□□□□ -1.93
GTDC1-208ENST00000415569 ICOSQ9Y6W8 199 aa3.01□□□□□ -1.93
GTDC1-208ENST00000415569 A0A0B4J2C4 111 aa3.01□□□□□ -1.93
GTDC1-208ENST00000415569 A0A0J9YWU9 116 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms