RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 HAMPP81172 84 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 COTL1Q14019 142 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 LAGE3Q14657 143 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 IQCJQ1A5X6 159 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 MRPL51Q4U2R6 128 aaKnown RBP3.21□□□□□ -1.9
VPS41-205ENST00000414632 TMEM97Q5BJF2 176 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 RNASEKQ6P5S7 137 aaKnown RBP3.21□□□□□ -1.9
VPS41-205ENST00000414632 ENHOQ6UWT2 76 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 LINC00269Q8N2A0 174 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 TMEM243Q9BU79 118 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 ST20Q9HBF5 79 aa3.21□□□□□ -1.9
VPS41-205ENST00000414632 D6R8Y8 96 aa3.2□□□□□ -1.9
VPS41-205ENST00000414632 I3L3M4 83 aa3.2□□□□□ -1.9
VPS41-205ENST00000414632 KRTAP10-1P60331 282 aa3.2□□□□□ -1.9
VPS41-205ENST00000414632 HBBP68871 147 aa3.2□□□□□ -1.9
VPS41-205ENST00000414632 ELOBQ15370 118 aa3.2□□□□□ -1.9
VPS41-205ENST00000414632 FAM104BQ5XKR9 115 aa3.2□□□□□ -1.9
VPS41-205ENST00000414632 LINC01561Q8N1V8 128 aa3.2□□□□□ -1.9
VPS41-205ENST00000414632 Q8N814 137 aa3.2□□□□□ -1.9
VPS41-205ENST00000414632 C20orf203Q8NBC4 194 aa3.2□□□□□ -1.9
VPS41-205ENST00000414632 MRAP2Q96G30 205 aa3.2□□□□□ -1.9
VPS41-205ENST00000414632 TMEM70Q9BUB7 260 aa3.2□□□□□ -1.9
VPS41-205ENST00000414632 CHCHD7Q9BUK0 85 aa3.2□□□□□ -1.9
VPS41-205ENST00000414632 ABCA13Q86UQ4 5058 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 A0A087WYN8 130 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 TRBV6-5A0A0K0K1A5 114 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 A0A1B0GXF2 115 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 TMEM218A2RU14 115 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 PPP1R2P9O14990 202 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 SNAPINO95295 136 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 NPYP01303 97 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 MT-ND4LP03901 98 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 FGF6P10767 208 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 CKS2P33552 79 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 PKIAP61925 76 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 REG3AQ06141 175 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 Q0VG73 95 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 AMMECR1LQ6DCA0 310 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 REG3GQ6UW15 175 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 FRZBQ92765 325 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 RMI2Q96E14 147 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 FAT1Q14517 4588 aa3.19□□□□□ -1.9
VPS41-205ENST00000414632 VPS13BQ7Z7G8 4022 aa3.18□□□□□ -1.9
VPS41-205ENST00000414632 LOC389332A0A1B0GUA5 103 aa3.18□□□□□ -1.9
VPS41-205ENST00000414632 A0A1B0GV90 55 aa3.18□□□□□ -1.9
VPS41-205ENST00000414632 A0A1B0GW15 77 aa3.18□□□□□ -1.9
VPS41-205ENST00000414632 FCER1GP30273 86 aa3.18□□□□□ -1.9
VPS41-205ENST00000414632 AKR1D1P51857 326 aa3.18□□□□□ -1.9
VPS41-205ENST00000414632 POLR2KP53803 58 aaKnown RBP3.18□□□□□ -1.9
VPS41-205ENST00000414632 MIAQ16674 131 aa3.18□□□□□ -1.9
VPS41-205ENST00000414632 RNASE13Q5GAN3 156 aaKnown RBP3.18□□□□□ -1.9
VPS41-205ENST00000414632 UQCC3Q6UW78 93 aa3.18□□□□□ -1.9
VPS41-205ENST00000414632 OPRPNQ99935 248 aaPredicted RBP3.18□□□□□ -1.9
VPS41-205ENST00000414632 PRR34Q9NV39 138 aa3.18□□□□□ -1.9
VPS41-205ENST00000414632 TRBV27A0A0K0K1C4 114 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 C7orf77A4D0Y5 90 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 EPM2AB3EWF7 344 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 TCAPO15273 167 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 S100A8P05109 93 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 ESDP10768 282 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 SEC61GP60059 68 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 RPL39P62891 51 aaKnown RBP3.17□□□□□ -1.9
VPS41-205ENST00000414632 KRTAP26-1Q6PEX3 210 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 TMEM136Q6ZRR5 245 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 ATP5L2Q7Z4Y8 100 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 BTF3L4Q96K17 158 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 PRELID3AQ96N28 172 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 IMMP2LQ96T52 175 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 SMIM2Q9BVW6 85 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 SEC11CQ9BY50 192 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 RPS10P5Q9NQ39 176 aa3.17□□□□□ -1.9
VPS41-205ENST00000414632 APOC3P02656 99 aa3.16□□□□□ -1.9
VPS41-205ENST00000414632 SMR3BP02814 79 aaPredicted RBP3.16□□□□□ -1.9
VPS41-205ENST00000414632 XCL1P47992 114 aa3.16□□□□□ -1.9
VPS41-205ENST00000414632 Q6ZUT4 128 aa3.16□□□□□ -1.9
VPS41-205ENST00000414632 ORMDL3Q8N138 153 aa3.16□□□□□ -1.9
VPS41-205ENST00000414632 OR5A1Q8NGJ0 315 aa3.16□□□□□ -1.9
VPS41-205ENST00000414632 CHCHD10Q8WYQ3 142 aaPredicted RBP3.16□□□□□ -1.9
VPS41-205ENST00000414632 TMEM101Q96IK0 257 aa3.16□□□□□ -1.9
VPS41-205ENST00000414632 KIR2DL4Q99706 377 aa3.16□□□□□ -1.9
VPS41-205ENST00000414632 C20orf78Q9BR46 151 aa3.16□□□□□ -1.9
VPS41-205ENST00000414632 SRRM2Q9UQ35 2752 aaKnown RBP3.15□□□□□ -1.9
VPS41-205ENST00000414632 TRBV24-1A0A075B6N3 115 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 TRAV8-4A0A0B4J246 113 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 H7C423 109 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 CCL25O15444 150 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 PPP1R17O96001 155 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 SMIM6P0DI80 62 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 ZNF25P17030 456 aaPredicted RBP3.15□□□□□ -1.91
VPS41-205ENST00000414632 HIGD2BQ4VC39 106 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 C10orf91Q5T1B1 145 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 ZNF664Q8N3J9 261 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 C15orf56Q8N910 161 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 LINC00526Q96FQ7 95 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 MAP1LC3AQ9H492 121 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 CDC42SE2Q9NRR3 84 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 CARHSP1Q9Y2V2 147 aaKnown RBP3.15□□□□□ -1.91
VPS41-205ENST00000414632 UBE2D4Q9Y2X8 147 aa3.15□□□□□ -1.91
VPS41-205ENST00000414632 TGIF2-C20orf24A0A0A6YYL0 155 aa3.14□□□□□ -1.91
VPS41-205ENST00000414632 TRAV13-1A0A0B4J241 112 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms