RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 TTC32Q5I0X7 151 aa1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 C2orf91Q6ZV80 131 aa1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 ATOH7Q8N100 152 aa1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 LINC00337Q8N6G1 96 aa1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 RPL39LQ96EH5 51 aaKnown RBP1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 PRELID3AQ96N28 172 aa1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 SNHG12Q9BXW3 62 aa1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 C16orf95Q9H693 158 aa1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 ZMAT5Q9UDW3 170 aaKnown RBP1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 PRO0628Q9UI54 55 aa1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 UFC1Q9Y3C8 167 aa1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 HLA-DRB4X5D2U9 266 aa1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 FN1P02751 2386 aaKnown RBP1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 AKAP9Q99996 3911 aa1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 UNC79Q9P2D8 2635 aa1.6□□□□□ -2.15
HMGB1P11-201ENST00000413899 ANK3Q12955 4377 aaKnown RBP1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 TRAV12-2A0A075B6T6 113 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 TRAV21A0A0B4J279 112 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 H3BMM0 161 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 H3BQ85 93 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 SYS1-DBNDD2H3BUS1 97 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 M0R381 172 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 GNRH2O43555 120 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 PRM2P04554 102 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 LINC00614P0C842 121 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 IGLC3P0DOY3 106 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 KRTDAPP60985 99 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 DEFB114Q30KQ6 69 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 SPATA45Q537H7 98 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 PSMG4Q5JS54 123 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 TMEM78Q5T7P6 136 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 FOXI2Q6ZQN5 318 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 S100A7AQ86SG5 101 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 BAGE3Q86Y29 109 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 C2orf88Q9BSF0 95 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 SMIM2Q9BVW6 85 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 WFDC10AQ9H1F0 79 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 TEX15Q9BXT5 2789 aa1.59□□□□□ -2.15
HMGB1P11-201ENST00000413899 SONP18583 2426 aaKnown RBP1.59□□□□□ -2.16
HMGB1P11-201ENST00000413899 NSD1Q96L73 2696 aaPredicted RBP1.59□□□□□ -2.16
HMGB1P11-201ENST00000413899 FASNP49327 2511 aaKnown RBP1.59□□□□□ -2.16
HMGB1P11-201ENST00000413899 SETXQ7Z333 2677 aaKnown RBP1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 GCN1Q92616 2671 aaKnown RBP1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 OTOGQ6ZRI0 2925 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 IGKV2D-26A0A0A0MRZ7 120 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 TRAV12-3A0A0B4J271 114 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 TRBV6-5A0A0K0K1A5 114 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 A0A1B0GV90 55 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 OR4C46A6NHA9 309 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 TSTD3H0UI37 97 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 M0QY20 66 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 TCF21O43680 179 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 IGLV1-51P01701 117 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 HBDP02042 147 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 ORM1P02763 201 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 PPBPP02775 128 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 CRYGDP07320 174 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 CD7P09564 240 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 LINC00694P0DN24 101 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 S100A7P31151 101 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 RNASE4P34096 147 aaKnown RBP1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 FUSP35637 526 aaKnown RBP eCLIP1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 ASIPP42127 132 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 POLR2KP53803 58 aaKnown RBP1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 DEFB131AP59861 70 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 PMVKQ15126 192 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 LGALS9BQ3B8N2 356 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 SAMD13Q5VXD3 122 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 LGALS9CQ6DKI2 356 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 MRPL52Q86TS9 123 aaKnown RBP1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 C1orf158Q8N1D5 194 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 Q8N8P6 123 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 OR11H1Q8NG94 326 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 OR2K2Q8NGT1 345 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 MRAP2Q96G30 205 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 AP1S3Q96PC3 154 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 PMCHL2Q9BQD1 86 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 LINC00467Q9BRT7 94 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 TMEM70Q9BUB7 260 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 VAMP8Q9BV40 100 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 MAP1LC3AQ9H492 121 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 DPH3P1Q9H4G8 78 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 LAMTOR2Q9Y2Q5 125 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 HELZ2Q9BYK8 2649 aaKnown RBP1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 MYO9AB2RTY4 2548 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 TLN2Q9Y4G6 2542 aa1.58□□□□□ -2.16
HMGB1P11-201ENST00000413899 CENPEQ02224 2701 aa1.57□□□□□ -2.16
HMGB1P11-201ENST00000413899 ITPR2Q14571 2701 aa1.57□□□□□ -2.16
HMGB1P11-201ENST00000413899 ACANP16112 2415 aa1.57□□□□□ -2.16
HMGB1P11-201ENST00000413899 SORL1Q92673 2214 aa1.57□□□□□ -2.16
HMGB1P11-201ENST00000413899 IGLV10-54A0A075B6I4 117 aa1.57□□□□□ -2.16
HMGB1P11-201ENST00000413899 LOC389332A0A1B0GUA5 103 aa1.57□□□□□ -2.16
HMGB1P11-201ENST00000413899 FAM240AA0A1B0GVK7 77 aa1.57□□□□□ -2.16
HMGB1P11-201ENST00000413899 IGIPA6NJ69 53 aa1.57□□□□□ -2.16
HMGB1P11-201ENST00000413899 TCAPO15273 167 aa1.57□□□□□ -2.16
HMGB1P11-201ENST00000413899 LEPROTL1O95214 131 aa1.57□□□□□ -2.16
HMGB1P11-201ENST00000413899 MGPP08493 103 aa1.57□□□□□ -2.16
HMGB1P11-201ENST00000413899 P0DMU3 169 aa1.57□□□□□ -2.16
HMGB1P11-201ENST00000413899 FAM231AP0DMU4 169 aa1.57□□□□□ -2.16
HMGB1P11-201ENST00000413899 FAM231CP0DMU5 169 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms