RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 C16orf74Q96GX8 76 aa13.49□□□□□ -0.25
TNFRSF8-202ENST00000413146 ABCA12Q86UK0 2595 aa13.49□□□□□ -0.25
TNFRSF8-202ENST00000413146 GAGE7O76087 117 aa13.48□□□□□ -0.25
TNFRSF8-202ENST00000413146 GAGE12FP0CL80 117 aa13.48□□□□□ -0.25
TNFRSF8-202ENST00000413146 GAGE12GP0CL81 117 aa13.48□□□□□ -0.25
TNFRSF8-202ENST00000413146 GAGE12IP0CL82 117 aa13.48□□□□□ -0.25
TNFRSF8-202ENST00000413146 CMC4P56277 68 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF8-202ENST00000413146 NHLRC4P0CG21 123 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF8-202ENST00000413146 GIG44P09565 113 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF8-202ENST00000413146 PPDPFQ9H3Y8 114 aa13.46□□□□□ -0.25
TNFRSF8-202ENST00000413146 LOC100131303A0A0U1RQF7 123 aa13.45□□□□□ -0.26
TNFRSF8-202ENST00000413146 PLAC8L1A1L4L8 177 aa13.45□□□□□ -0.26
TNFRSF8-202ENST00000413146 AKAP9Q99996 3911 aa13.45□□□□□ -0.26
TNFRSF8-202ENST00000413146 ESM1Q9NQ30 184 aa13.45□□□□□ -0.26
TNFRSF8-202ENST00000413146 TRBV6-4A0A1B0GX49 114 aa13.44□□□□□ -0.26
TNFRSF8-202ENST00000413146 RPL35AP18077 110 aaKnown RBP13.44□□□□□ -0.26
TNFRSF8-202ENST00000413146 WFDC10AQ9H1F0 79 aa13.44□□□□□ -0.26
TNFRSF8-202ENST00000413146 TLN2Q9Y4G6 2542 aa13.44□□□□□ -0.26
TNFRSF8-202ENST00000413146 TRGV4A0A0C4DH28 118 aa13.44□□□□□ -0.26
TNFRSF8-202ENST00000413146 TRACP01848 142 aa13.44□□□□□ -0.26
TNFRSF8-202ENST00000413146 GAGE6Q13070 117 aa13.44□□□□□ -0.26
TNFRSF8-202ENST00000413146 COX7B2Q8TF08 81 aa13.44□□□□□ -0.26
TNFRSF8-202ENST00000413146 IGKV3OR2-268A0A0C4DH90 116 aa13.42□□□□□ -0.26
TNFRSF8-202ENST00000413146 TOMM7Q9P0U1 55 aa13.42□□□□□ -0.26
TNFRSF8-202ENST00000413146 TRAV13-2A0A0B4J235 113 aa13.41□□□□□ -0.26
TNFRSF8-202ENST00000413146 CRPP02741 224 aa13.41□□□□□ -0.26
TNFRSF8-202ENST00000413146 PF4P02776 101 aa13.4□□□□□ -0.26
TNFRSF8-202ENST00000413146 ACYP1P07311 99 aa13.4□□□□□ -0.26
TNFRSF8-202ENST00000413146 WFDC11Q8NEX6 87 aa13.4□□□□□ -0.26
TNFRSF8-202ENST00000413146 FAM222AQ5U5X8 452 aa13.4□□□□□ -0.26
TNFRSF8-202ENST00000413146 HIST2H2BCQ6DN03 193 aa13.4□□□□□ -0.26
TNFRSF8-202ENST00000413146 MIR7-3HGQ8N6C7 128 aa13.4□□□□□ -0.26
TNFRSF8-202ENST00000413146 OVOL2Q9BRP0 275 aa13.4□□□□□ -0.26
TNFRSF8-202ENST00000413146 SONP18583 2426 aaKnown RBP13.4□□□□□ -0.26
TNFRSF8-202ENST00000413146 BAALC-AS2P0C853 105 aa13.39□□□□□ -0.27
TNFRSF8-202ENST00000413146 FAM110AQ9BQ89 295 aa13.39□□□□□ -0.27
TNFRSF8-202ENST00000413146 NOTCH3Q9UM47 2321 aa13.39□□□□□ -0.27
TNFRSF8-202ENST00000413146 ZNF469Q96JG9 3925 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF8-202ENST00000413146 FAM218AQ96MZ4 157 aa13.38□□□□□ -0.27
TNFRSF8-202ENST00000413146 CHCHD5Q9BSY4 110 aa13.38□□□□□ -0.27
TNFRSF8-202ENST00000413146 SND1-IT1Q9HBX3 110 aa13.38□□□□□ -0.27
TNFRSF8-202ENST00000413146 IGLV4-60A0A075B6I1 120 aa13.37□□□□□ -0.27
TNFRSF8-202ENST00000413146 TRBV6-8A0A0A6YYG3 113 aa13.37□□□□□ -0.27
TNFRSF8-202ENST00000413146 B5MCH6 92 aa13.37□□□□□ -0.27
TNFRSF8-202ENST00000413146 IGLV1-51P01701 117 aa13.37□□□□□ -0.27
TNFRSF8-202ENST00000413146 CSNK1G2-AS1Q8NCQ2 148 aa13.37□□□□□ -0.27
TNFRSF8-202ENST00000413146 LINC01006Q8NI28 216 aa13.37□□□□□ -0.27
TNFRSF8-202ENST00000413146 C19orf73Q9NVV2 129 aa13.37□□□□□ -0.27
TNFRSF8-202ENST00000413146 RPL28P46779 137 aaKnown RBP13.37□□□□□ -0.27
TNFRSF8-202ENST00000413146 ITPR3Q14573 2671 aa13.37□□□□□ -0.27
TNFRSF8-202ENST00000413146 TRBV7-7A0A0K0K1E9 115 aa13.36□□□□□ -0.27
TNFRSF8-202ENST00000413146 LINC00158P58513 81 aa13.36□□□□□ -0.27
TNFRSF8-202ENST00000413146 C2CD3Q4AC94 2353 aa13.36□□□□□ -0.27
TNFRSF8-202ENST00000413146 FHL2Q14192 279 aa13.35□□□□□ -0.27
TNFRSF8-202ENST00000413146 LINC00337Q8N6G1 96 aa13.35□□□□□ -0.27
TNFRSF8-202ENST00000413146 APCP25054 2843 aa13.34□□□□□ -0.27
TNFRSF8-202ENST00000413146 IGHV3OR16-9A0A0B4J2B5 98 aa13.34□□□□□ -0.27
TNFRSF8-202ENST00000413146 CCDC179H3BU77 68 aa13.34□□□□□ -0.27
TNFRSF8-202ENST00000413146 IGKV2-28A0A075B6P5 120 aa13.34□□□□□ -0.27
TNFRSF8-202ENST00000413146 IGKV2D-28P01615 120 aa13.34□□□□□ -0.27
TNFRSF8-202ENST00000413146 SS18L2Q9UHA2 77 aa13.34□□□□□ -0.27
TNFRSF8-202ENST00000413146 SETXQ7Z333 2677 aaKnown RBP13.33□□□□□ -0.28
TNFRSF8-202ENST00000413146 NF1P21359 2839 aa13.33□□□□□ -0.28
TNFRSF8-202ENST00000413146 C16orf95Q9H693 158 aa13.33□□□□□ -0.28
TNFRSF8-202ENST00000413146 JMJD1CQ15652 2540 aa13.32□□□□□ -0.28
TNFRSF8-202ENST00000413146 A0A087WZ39 114 aa13.32□□□□□ -0.28
TNFRSF8-202ENST00000413146 Q9HAA7 133 aa13.32□□□□□ -0.28
TNFRSF8-202ENST00000413146 TENM4Q6N022 2769 aa13.31□□□□□ -0.28
TNFRSF8-202ENST00000413146 IBA57-AS1B1ANH7 110 aa13.31□□□□□ -0.28
TNFRSF8-202ENST00000413146 RNASE1P07998 156 aaKnown RBP13.31□□□□□ -0.28
TNFRSF8-202ENST00000413146 INAFM2P0DMQ5 153 aa13.31□□□□□ -0.28
TNFRSF8-202ENST00000413146 C5orf38Q86SI9 138 aa13.31□□□□□ -0.28
TNFRSF8-202ENST00000413146 C22orf24Q9Y442 160 aa13.31□□□□□ -0.28
TNFRSF8-202ENST00000413146 CCL18P55774 89 aa13.3□□□□□ -0.28
TNFRSF8-202ENST00000413146 DNAL4O96015 105 aa13.3□□□□□ -0.28
TNFRSF8-202ENST00000413146 MALP21145 153 aa13.3□□□□□ -0.28
TNFRSF8-202ENST00000413146 SMIM11BQ8TCY0 68 aa13.3□□□□□ -0.28
TNFRSF8-202ENST00000413146 CUBNO60494 3623 aa13.29□□□□□ -0.28
TNFRSF8-202ENST00000413146 PFN2P35080 140 aa13.29□□□□□ -0.28
TNFRSF8-202ENST00000413146 SMCR5Q8TEV8 140 aa13.29□□□□□ -0.28
TNFRSF8-202ENST00000413146 LINC00643Q86TS7 51 aa13.29□□□□□ -0.28
TNFRSF8-202ENST00000413146 IMUPQ9GZP8 106 aa13.29□□□□□ -0.28
TNFRSF8-202ENST00000413146 DEFB130BP0DP73 79 aa13.28□□□□□ -0.28
TNFRSF8-202ENST00000413146 DEFB130AP0DP74 79 aa13.28□□□□□ -0.28
TNFRSF8-202ENST00000413146 LINC00959A0A1B0GUT2 108 aa13.28□□□□□ -0.28
TNFRSF8-202ENST00000413146 FLNAP21333 2647 aaKnown RBP13.27□□□□□ -0.29
TNFRSF8-202ENST00000413146 A0A087WYN8 130 aa13.26□□□□□ -0.29
TNFRSF8-202ENST00000413146 H0YGX0 51 aa13.25□□□□□ -0.29
TNFRSF8-202ENST00000413146 GAGE2AQ6NT46 116 aa13.25□□□□□ -0.29
TNFRSF8-202ENST00000413146 C11orf68Q9H3H3 251 aaKnown RBP13.25□□□□□ -0.29
TNFRSF8-202ENST00000413146 NIPBLQ6KC79 2804 aaeCLIP13.25□□□□□ -0.29
TNFRSF8-202ENST00000413146 CCDC168Q8NDH2 2452 aa13.25□□□□□ -0.29
TNFRSF8-202ENST00000413146 PAX4O43316 350 aa13.25□□□□□ -0.29
TNFRSF8-202ENST00000413146 C6orf226Q5I0X4 101 aa13.25□□□□□ -0.29
TNFRSF8-202ENST00000413146 SETD2Q9BYW2 2564 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF8-202ENST00000413146 KIR2DL5BQ8NHK3 375 aa13.24□□□□□ -0.29
TNFRSF8-202ENST00000413146 FAM236AA0A1B0GUQ0 79 aa13.24□□□□□ -0.29
TNFRSF8-202ENST00000413146 FAM236BA0A1B0GV22 79 aa13.24□□□□□ -0.29
TNFRSF8-202ENST00000413146 GYPEP15421 78 aa13.24□□□□□ -0.29
TNFRSF8-202ENST00000413146 KRTAP1-1Q07627 177 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms