RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 LINC00469Q8N7U9 141 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 UPK3BQ9BT76 320 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 PRO1933Q9H354 126 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 GEMIN7Q9H840 131 aaKnown RBP4.52□□□□□ -1.69
VPS41-204ENST00000413141 PRR34Q9NV39 138 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 KLK5Q9Y337 293 aaPredicted RBP4.52□□□□□ -1.69
VPS41-204ENST00000413141 STARD9Q9P2P6 4700 aa4.52□□□□□ -1.69
VPS41-204ENST00000413141 LINC00959A0A1B0GUT2 108 aa4.51□□□□□ -1.69
VPS41-204ENST00000413141 E9PLD3 99 aa4.51□□□□□ -1.69
VPS41-204ENST00000413141 DNAH10OSP0CZ25 163 aa4.51□□□□□ -1.69
VPS41-204ENST00000413141 NMUP48645 174 aa4.51□□□□□ -1.69
VPS41-204ENST00000413141 HERVK_113P61574 105 aa4.51□□□□□ -1.69
VPS41-204ENST00000413141 COX6A2Q02221 97 aa4.51□□□□□ -1.69
VPS41-204ENST00000413141 TP73-AS1Q9UF72 201 aa4.51□□□□□ -1.69
VPS41-204ENST00000413141 CDKN2A-AS1Q9UH64 79 aa4.51□□□□□ -1.69
VPS41-204ENST00000413141 KLK12Q9UKR0 248 aa4.51□□□□□ -1.69
VPS41-204ENST00000413141 H3BRM9 83 aa4.5□□□□□ -1.69
VPS41-204ENST00000413141 SIVA1O15304 175 aa4.5□□□□□ -1.69
VPS41-204ENST00000413141 CCL25O15444 150 aa4.5□□□□□ -1.69
VPS41-204ENST00000413141 CRPP02741 224 aa4.5□□□□□ -1.69
VPS41-204ENST00000413141 COX8AP10176 69 aa4.5□□□□□ -1.69
VPS41-204ENST00000413141 SS18Q15532 418 aa4.5□□□□□ -1.69
VPS41-204ENST00000413141 ENHOQ6UWT2 76 aa4.5□□□□□ -1.69
VPS41-204ENST00000413141 C14orf144Q96I85 54 aa4.5□□□□□ -1.69
VPS41-204ENST00000413141 UQCR10Q9UDW1 63 aa4.5□□□□□ -1.69
VPS41-204ENST00000413141 LYSTQ99698 3801 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 IGHV3-64A0A075B6Q5 118 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 TRAV8-3A0A0A6YYJ7 113 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 IGHV3OR16-9A0A0B4J2B5 98 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 IGHV1-58A0A0C4DH39 117 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 PCP4L1A6NKN8 68 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 SMIM1B2RUZ4 78 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 LEPROTO15243 131 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 SPINK8P0C7L1 97 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 DDTP30046 118 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 XCL1P47992 114 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 TSPEAR-AS2P59090 65 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 ZFAND6Q6FIF0 208 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 SLC25A34Q6PIV7 304 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 PCP2Q8IVA1 136 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 BOD1L2Q8IYS8 172 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 MUC7Q8TAX7 377 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 CHCHD10Q8WYQ3 142 aaPredicted RBP4.49□□□□□ -1.69
VPS41-204ENST00000413141 UBE2WQ96B02 151 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 MIEN1Q9BRT3 115 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 TTTY13Q9BZ97 58 aa4.49□□□□□ -1.69
VPS41-204ENST00000413141 PLECQ15149 4684 aaKnown RBP4.48□□□□□ -1.69
VPS41-204ENST00000413141 IGLV10-54A0A075B6I4 117 aa4.48□□□□□ -1.69
VPS41-204ENST00000413141 A0A087WZ39 114 aa4.48□□□□□ -1.69
VPS41-204ENST00000413141 IGLV5-39A0A0G2JS06 123 aa4.48□□□□□ -1.69
VPS41-204ENST00000413141 FAM229AH3BQW9 127 aa4.48□□□□□ -1.69
VPS41-204ENST00000413141 J3QQQ9 107 aa4.48□□□□□ -1.69
VPS41-204ENST00000413141 DLEU1O43261 78 aa4.48□□□□□ -1.69
VPS41-204ENST00000413141 FOXI1Q12951 378 aa4.48□□□□□ -1.69
VPS41-204ENST00000413141 MIAQ16674 131 aa4.48□□□□□ -1.69
VPS41-204ENST00000413141 CD164L2Q6UWJ8 174 aa4.48□□□□□ -1.69
VPS41-204ENST00000413141 UBE2DNLQ8IWF7 75 aa4.48□□□□□ -1.69
VPS41-204ENST00000413141 PLEKHB2Q96CS7 222 aa4.48□□□□□ -1.69
VPS41-204ENST00000413141 WWC2-AS2Q96NR7 200 aa4.48□□□□□ -1.69
VPS41-204ENST00000413141 TRAV8-4A0A0B4J246 113 aa4.47□□□□□ -1.69
VPS41-204ENST00000413141 MYMXA0A1B0GTQ4 84 aa4.47□□□□□ -1.69
VPS41-204ENST00000413141 GAGE12HA6NDE8 117 aa4.47□□□□□ -1.69
VPS41-204ENST00000413141 ZNF815PA8K554 130 aa4.47□□□□□ -1.69
VPS41-204ENST00000413141 LGALS3P17931 250 aaKnown RBP4.47□□□□□ -1.69
VPS41-204ENST00000413141 HNRNPA3P51991 378 aaKnown RBP4.47□□□□□ -1.69
VPS41-204ENST00000413141 C2orf91Q6ZV80 131 aa4.47□□□□□ -1.69
VPS41-204ENST00000413141 C5orf38Q86SI9 138 aa4.47□□□□□ -1.69
VPS41-204ENST00000413141 C10orf126Q8N4M7 172 aa4.47□□□□□ -1.69
VPS41-204ENST00000413141 MAPKAPK5-AS1Q8N8E1 139 aa4.47□□□□□ -1.69
VPS41-204ENST00000413141 Q9H8V8 135 aa4.47□□□□□ -1.69
VPS41-204ENST00000413141 TMEM238LA0A1B0GVL6 79 aa4.46□□□□□ -1.7
VPS41-204ENST00000413141 IBA57-AS1B1ANH7 110 aa4.46□□□□□ -1.7
VPS41-204ENST00000413141 K7EP13 123 aa4.46□□□□□ -1.7
VPS41-204ENST00000413141 COX7A2LO14548 114 aa4.46□□□□□ -1.7
VPS41-204ENST00000413141 KRTAP26-1Q6PEX3 210 aa4.46□□□□□ -1.7
VPS41-204ENST00000413141 LINC01561Q8N1V8 128 aa4.46□□□□□ -1.7
VPS41-204ENST00000413141 KRTAP1-5Q9BYS1 174 aa4.46□□□□□ -1.7
VPS41-204ENST00000413141 LINC00587B1AMM8 73 aa4.45□□□□□ -1.7
VPS41-204ENST00000413141 COX7B2Q8TF08 81 aa4.45□□□□□ -1.7
VPS41-204ENST00000413141 C1orf43Q9BWL3 253 aa4.45□□□□□ -1.7
VPS41-204ENST00000413141 Q9HAA7 133 aa4.45□□□□□ -1.7
VPS41-204ENST00000413141 TGP01266 2768 aa4.44□□□□□ -1.7
VPS41-204ENST00000413141 IGKV2D-24A0A075B6R9 120 aa4.44□□□□□ -1.7
VPS41-204ENST00000413141 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
VPS41-204ENST00000413141 NDUFA1O15239 70 aa4.44□□□□□ -1.7
VPS41-204ENST00000413141 MALP21145 153 aa4.44□□□□□ -1.7
VPS41-204ENST00000413141 SCGB1D4Q6XE38 83 aa4.44□□□□□ -1.7
VPS41-204ENST00000413141 Q8IZM0 81 aa4.44□□□□□ -1.7
VPS41-204ENST00000413141 ORAOV1Q8WV07 137 aa4.44□□□□□ -1.7
VPS41-204ENST00000413141 ZNF625Q96I27 306 aaPredicted RBP4.44□□□□□ -1.7
VPS41-204ENST00000413141 KRTAP9-2Q9BYQ4 174 aa4.44□□□□□ -1.7
VPS41-204ENST00000413141 TOMM7Q9P0U1 55 aa4.44□□□□□ -1.7
VPS41-204ENST00000413141 HIGD1BQ9P298 99 aa4.44□□□□□ -1.7
VPS41-204ENST00000413141 NDUFA12Q9UI09 145 aa4.44□□□□□ -1.7
VPS41-204ENST00000413141 DNAH1Q9P2D7 4330 aa4.43□□□□□ -1.7
VPS41-204ENST00000413141 A0A0J9YXY3 114 aa4.43□□□□□ -1.7
VPS41-204ENST00000413141 APOMO95445 188 aa4.43□□□□□ -1.7
VPS41-204ENST00000413141 CTAG1AP78358 180 aa4.43□□□□□ -1.7
VPS41-204ENST00000413141 SPAG11BQ08648 103 aa4.43□□□□□ -1.7
VPS41-204ENST00000413141 TTC32Q5I0X7 151 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms