RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 DAZ3Q9NR90 486 aaKnown RBP6.89□□□□□ -1.31
LINC01643-201ENST00000412218 K7EP13 123 aa6.88□□□□□ -1.31
LINC01643-201ENST00000412218 DNAH10OSP0CZ25 163 aa6.88□□□□□ -1.31
LINC01643-201ENST00000412218 TIRAPP58753 221 aa6.88□□□□□ -1.31
LINC01643-201ENST00000412218 SLC25A29Q8N8R3 303 aa6.88□□□□□ -1.31
LINC01643-201ENST00000412218 CHCHD7Q9BUK0 85 aa6.88□□□□□ -1.31
LINC01643-201ENST00000412218 TIMM21Q9BVV7 248 aa6.88□□□□□ -1.31
LINC01643-201ENST00000412218 VCX2Q9H322 139 aa6.88□□□□□ -1.31
LINC01643-201ENST00000412218 TRAV8-6A0A0B4J262 113 aa6.87□□□□□ -1.31
LINC01643-201ENST00000412218 TRBV6-4A0A1B0GX49 114 aa6.87□□□□□ -1.31
LINC01643-201ENST00000412218 A6NDN8 102 aa6.87□□□□□ -1.31
LINC01643-201ENST00000412218 GAGE1Q13065 139 aa6.87□□□□□ -1.31
LINC01643-201ENST00000412218 TAL2Q16559 108 aa6.87□□□□□ -1.31
LINC01643-201ENST00000412218 ORAOV1Q8WV07 137 aa6.87□□□□□ -1.31
LINC01643-201ENST00000412218 AMELXQ99217 191 aa6.87□□□□□ -1.31
LINC01643-201ENST00000412218 PRADC1Q9BSG0 188 aa6.87□□□□□ -1.31
LINC01643-201ENST00000412218 CHAC1Q9BUX1 264 aa6.87□□□□□ -1.31
LINC01643-201ENST00000412218 KRTAP4-5Q9BYR2 181 aa6.87□□□□□ -1.31
LINC01643-201ENST00000412218 TRBV25-1A0A075B6N4 114 aa6.86□□□□□ -1.31
LINC01643-201ENST00000412218 MYMXA0A1B0GTQ4 84 aa6.86□□□□□ -1.31
LINC01643-201ENST00000412218 UBE2D3P61077 147 aa6.86□□□□□ -1.31
LINC01643-201ENST00000412218 UBE2D2P62837 147 aa6.86□□□□□ -1.31
LINC01643-201ENST00000412218 MRPS36P82909 103 aaKnown RBP6.86□□□□□ -1.31
LINC01643-201ENST00000412218 TMEM170BQ5T4T1 132 aa6.86□□□□□ -1.31
LINC01643-201ENST00000412218 DEFB104AQ8WTQ1 72 aa6.86□□□□□ -1.31
LINC01643-201ENST00000412218 UBE2D4Q9Y2X8 147 aa6.86□□□□□ -1.31
LINC01643-201ENST00000412218 C10orf126Q8N4M7 172 aa6.85□□□□□ -1.31
LINC01643-201ENST00000412218 MAPKAPK5-AS1Q8N8E1 139 aa6.85□□□□□ -1.31
LINC01643-201ENST00000412218 GTSF1LQ9H1H1 148 aa6.85□□□□□ -1.31
LINC01643-201ENST00000412218 COX11Q9Y6N1 276 aa6.85□□□□□ -1.31
LINC01643-201ENST00000412218 LRP1BQ9NZR2 4599 aa6.85□□□□□ -1.31
LINC01643-201ENST00000412218 ABCA13Q86UQ4 5058 aa6.84□□□□□ -1.31
LINC01643-201ENST00000412218 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.84□□□□□ -1.31
LINC01643-201ENST00000412218 A0A087WTM6 91 aa6.84□□□□□ -1.31
LINC01643-201ENST00000412218 IGHV3-38A0A0C4DH36 116 aa6.84□□□□□ -1.31
LINC01643-201ENST00000412218 IGKV2-29A2NJV5 120 aaPredicted RBP6.84□□□□□ -1.31
LINC01643-201ENST00000412218 GAGE12JA6NER3 117 aa6.84□□□□□ -1.31
LINC01643-201ENST00000412218 ZNF815PA8K554 130 aa6.84□□□□□ -1.31
LINC01643-201ENST00000412218 LINC00694P0DN24 101 aa6.84□□□□□ -1.31
LINC01643-201ENST00000412218 ZNF25P17030 456 aaPredicted RBP6.84□□□□□ -1.31
LINC01643-201ENST00000412218 GAGE4Q13068 117 aa6.84□□□□□ -1.31
LINC01643-201ENST00000412218 GAGE5Q13069 117 aa6.84□□□□□ -1.31
LINC01643-201ENST00000412218 GAGE13Q4V321 117 aa6.84□□□□□ -1.31
LINC01643-201ENST00000412218 LINC01556Q5JQF7 62 aa6.84□□□□□ -1.31
LINC01643-201ENST00000412218 PLEKHB2Q96CS7 222 aa6.84□□□□□ -1.31
LINC01643-201ENST00000412218 HSPG2P98160 4391 aa6.84□□□□□ -1.31
LINC01643-201ENST00000412218 H7C423 109 aa6.83□□□□□ -1.32
LINC01643-201ENST00000412218 ZNF22P17026 224 aaPredicted RBP6.83□□□□□ -1.32
LINC01643-201ENST00000412218 FUSP35637 526 aaKnown RBP eCLIP6.83□□□□□ -1.32
LINC01643-201ENST00000412218 LELP1Q5T871 98 aa6.83□□□□□ -1.32
LINC01643-201ENST00000412218 DGAT2L7PQ6IED9 249 aa6.83□□□□□ -1.32
LINC01643-201ENST00000412218 Q6ZUT4 128 aa6.83□□□□□ -1.32
LINC01643-201ENST00000412218 ATP6V0E2Q8NHE4 81 aa6.83□□□□□ -1.32
LINC01643-201ENST00000412218 OPRPNQ99935 248 aaPredicted RBP6.83□□□□□ -1.32
LINC01643-201ENST00000412218 TTTY13Q9BZ97 58 aa6.83□□□□□ -1.32
LINC01643-201ENST00000412218 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
LINC01643-201ENST00000412218 Q9UF83 564 aa6.83□□□□□ -1.32
LINC01643-201ENST00000412218 CSDC2Q9Y534 153 aaKnown RBP6.83□□□□□ -1.32
LINC01643-201ENST00000412218 A0A0J9YXV3 536 aa6.82□□□□□ -1.32
LINC01643-201ENST00000412218 TINCRA0A1B0GVN0 87 aa6.82□□□□□ -1.32
LINC01643-201ENST00000412218 TMEM223A0PJW6 202 aa6.82□□□□□ -1.32
LINC01643-201ENST00000412218 H3BRM9 83 aa6.82□□□□□ -1.32
LINC01643-201ENST00000412218 TAX1BP3O14907 124 aa6.82□□□□□ -1.32
LINC01643-201ENST00000412218 LEPROTO15243 131 aa6.82□□□□□ -1.32
LINC01643-201ENST00000412218 LGALS3P17931 250 aaKnown RBP6.82□□□□□ -1.32
LINC01643-201ENST00000412218 GCSHP23434 173 aa6.82□□□□□ -1.32
LINC01643-201ENST00000412218 CEND1Q8N111 149 aa6.82□□□□□ -1.32
LINC01643-201ENST00000412218 TMEM243Q9BU79 118 aa6.82□□□□□ -1.32
LINC01643-201ENST00000412218 IBA57-AS1B1ANH7 110 aa6.81□□□□□ -1.32
LINC01643-201ENST00000412218 J3QQQ9 107 aa6.81□□□□□ -1.32
LINC01643-201ENST00000412218 UBE2L6O14933 153 aa6.81□□□□□ -1.32
LINC01643-201ENST00000412218 SCGB1D4Q6XE38 83 aa6.81□□□□□ -1.32
LINC01643-201ENST00000412218 Q8N1X5 172 aa6.81□□□□□ -1.32
LINC01643-201ENST00000412218 HIST1H4GQ99525 98 aa6.81□□□□□ -1.32
LINC01643-201ENST00000412218 TM2D2Q9BX73 214 aa6.81□□□□□ -1.32
LINC01643-201ENST00000412218 APOBP04114 4563 aaKnown RBP6.8□□□□□ -1.32
LINC01643-201ENST00000412218 TMEM238LA0A1B0GVL6 79 aa6.8□□□□□ -1.32
LINC01643-201ENST00000412218 A6NJY4 79 aa6.8□□□□□ -1.32
LINC01643-201ENST00000412218 IGHV3-30P01768 117 aa6.8□□□□□ -1.32
LINC01643-201ENST00000412218 IGHV3-33P01772 117 aa6.8□□□□□ -1.32
LINC01643-201ENST00000412218 IGHV3-30-3P0DP02 117 aa6.8□□□□□ -1.32
LINC01643-201ENST00000412218 IGHV3-30-5P0DP03 117 aa6.8□□□□□ -1.32
LINC01643-201ENST00000412218 UBE2D1P51668 147 aa6.8□□□□□ -1.32
LINC01643-201ENST00000412218 PTTG1IPP53801 180 aa6.8□□□□□ -1.32
LINC01643-201ENST00000412218 OR5A1Q8NGJ0 315 aa6.8□□□□□ -1.32
LINC01643-201ENST00000412218 FAM104AQ969W3 186 aa6.8□□□□□ -1.32
LINC01643-201ENST00000412218 TMEM101Q96IK0 257 aa6.8□□□□□ -1.32
LINC01643-201ENST00000412218 GEMIN7Q9H840 131 aaKnown RBP6.8□□□□□ -1.32
LINC01643-201ENST00000412218 DNAH5Q8TE73 4624 aa6.8□□□□□ -1.32
LINC01643-201ENST00000412218 LRCOL1A6NCL2 159 aa6.79□□□□□ -1.32
LINC01643-201ENST00000412218 HERVK_113P63121 156 aa6.79□□□□□ -1.32
LINC01643-201ENST00000412218 AMMECR1LQ6DCA0 310 aa6.79□□□□□ -1.32
LINC01643-201ENST00000412218 NTM-AS1Q6ZSK4 140 aa6.79□□□□□ -1.32
LINC01643-201ENST00000412218 FAM19A3Q7Z5A8 133 aa6.79□□□□□ -1.32
LINC01643-201ENST00000412218 Q8N3U1 123 aa6.79□□□□□ -1.32
LINC01643-201ENST00000412218 Q9HAA7 133 aa6.79□□□□□ -1.32
LINC01643-201ENST00000412218 SPANXB1Q9NS25 103 aaPredicted RBP6.79□□□□□ -1.32
LINC01643-201ENST00000412218 IGLV5-45A0A087WSX0 123 aa6.78□□□□□ -1.32
LINC01643-201ENST00000412218 IGHV1-58A0A0C4DH39 117 aa6.78□□□□□ -1.32
LINC01643-201ENST00000412218 C9orf118A6NHY6 69 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms