RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TRAV8-3A0A0A6YYJ7 113 aa9.56□□□□□ -0.88
LIMS1-205ENST00000410093 TEX48A0A1B0GUV7 120 aa9.56□□□□□ -0.88
LIMS1-205ENST00000410093 SPINK8P0C7L1 97 aa9.56□□□□□ -0.88
LIMS1-205ENST00000410093 SFTA2Q6UW10 78 aa9.56□□□□□ -0.88
LIMS1-205ENST00000410093 CFC1BP0CG36 223 aa9.55□□□□□ -0.88
LIMS1-205ENST00000410093 CFC1P0CG37 223 aa9.55□□□□□ -0.88
LIMS1-205ENST00000410093 DEFB130BP0DP73 79 aa9.55□□□□□ -0.88
LIMS1-205ENST00000410093 DEFB130AP0DP74 79 aa9.55□□□□□ -0.88
LIMS1-205ENST00000410093 MIAQ16674 131 aa9.55□□□□□ -0.88
LIMS1-205ENST00000410093 ATP6V0E2Q8NHE4 81 aa9.55□□□□□ -0.88
LIMS1-205ENST00000410093 NAA38Q9BRA0 125 aaKnown RBP9.55□□□□□ -0.88
LIMS1-205ENST00000410093 A0A1B0GUV1 79 aa9.54□□□□□ -0.88
LIMS1-205ENST00000410093 APOMO95445 188 aa9.54□□□□□ -0.88
LIMS1-205ENST00000410093 OCIAD2Q56VL3 154 aa9.54□□□□□ -0.88
LIMS1-205ENST00000410093 SH2D6Q7Z4S9 175 aa9.54□□□□□ -0.88
LIMS1-205ENST00000410093 MUSTN1Q8IVN3 82 aa9.54□□□□□ -0.88
LIMS1-205ENST00000410093 LITAFQ99732 161 aa9.54□□□□□ -0.88
LIMS1-205ENST00000410093 TRAV26-1A0A087WT03 109 aa9.53□□□□□ -0.88
LIMS1-205ENST00000410093 A4D1N5 150 aa9.53□□□□□ -0.88
LIMS1-205ENST00000410093 TSPAN13O95857 204 aa9.53□□□□□ -0.88
LIMS1-205ENST00000410093 CBY1Q9Y3M2 126 aa9.53□□□□□ -0.88
LIMS1-205ENST00000410093 TRAV13-1A0A0B4J241 112 aa9.52□□□□□ -0.88
LIMS1-205ENST00000410093 GYPEP15421 78 aa9.52□□□□□ -0.88
LIMS1-205ENST00000410093 FAM222AQ5U5X8 452 aa9.52□□□□□ -0.88
LIMS1-205ENST00000410093 CHCHD5Q9BSY4 110 aa9.52□□□□□ -0.88
LIMS1-205ENST00000410093 LOC100131303A0A0U1RQF7 123 aa9.51□□□□□ -0.89
LIMS1-205ENST00000410093 SMIM1B2RUZ4 78 aa9.51□□□□□ -0.89
LIMS1-205ENST00000410093 COX6A2Q02221 97 aa9.51□□□□□ -0.89
LIMS1-205ENST00000410093 LINC01561Q8N1V8 128 aa9.51□□□□□ -0.89
LIMS1-205ENST00000410093 ERG28Q9UKR5 140 aa9.51□□□□□ -0.89
LIMS1-205ENST00000410093 A8MZ25 164 aa9.51□□□□□ -0.89
LIMS1-205ENST00000410093 F5H768 121 aa9.51□□□□□ -0.89
LIMS1-205ENST00000410093 PAX4O43316 350 aa9.51□□□□□ -0.89
LIMS1-205ENST00000410093 SPART-AS1P0CW21 52 aa9.51□□□□□ -0.89
LIMS1-205ENST00000410093 G3V4G9 280 aa9.5□□□□□ -0.89
LIMS1-205ENST00000410093 IGHV3-33P01772 117 aa9.5□□□□□ -0.89
LIMS1-205ENST00000410093 ATP5G1P05496 136 aa9.5□□□□□ -0.89
LIMS1-205ENST00000410093 PRSS2P07478 247 aa9.5□□□□□ -0.89
LIMS1-205ENST00000410093 DAD1P61803 113 aa9.5□□□□□ -0.89
LIMS1-205ENST00000410093 GAGE6Q13070 117 aa9.5□□□□□ -0.89
LIMS1-205ENST00000410093 DEFB135Q30KP9 77 aa9.5□□□□□ -0.89
LIMS1-205ENST00000410093 IGHV4-28A0A0C4DH34 117 aa9.49□□□□□ -0.89
LIMS1-205ENST00000410093 Q8NAQ8 132 aa9.49□□□□□ -0.89
LIMS1-205ENST00000410093 MEGF8Q7Z7M0 2845 aa9.49□□□□□ -0.89
LIMS1-205ENST00000410093 LOC107984156A0A0G2JMH3 177 aa9.48□□□□□ -0.89
LIMS1-205ENST00000410093 J3QR89 54 aa9.48□□□□□ -0.89
LIMS1-205ENST00000410093 ARL17AQ8IVW1 177 aa9.48□□□□□ -0.89
LIMS1-205ENST00000410093 ZNF625Q96I27 306 aaPredicted RBP9.48□□□□□ -0.89
LIMS1-205ENST00000410093 Q9H8V8 135 aa9.48□□□□□ -0.89
LIMS1-205ENST00000410093 VWFP04275 2813 aa9.48□□□□□ -0.89
LIMS1-205ENST00000410093 NOTCH3Q9UM47 2321 aa9.48□□□□□ -0.89
LIMS1-205ENST00000410093 TRBV30A0A0K0K1B3 111 aa9.47□□□□□ -0.89
LIMS1-205ENST00000410093 H3BMG7 143 aa9.47□□□□□ -0.89
LIMS1-205ENST00000410093 IGHV4-30-4P0DP06 118 aa9.47□□□□□ -0.89
LIMS1-205ENST00000410093 OXLD1Q5BKU9 147 aa9.47□□□□□ -0.89
LIMS1-205ENST00000410093 A0A087WZ39 114 aa9.46□□□□□ -0.89
LIMS1-205ENST00000410093 M0QXV9 152 aa9.46□□□□□ -0.89
LIMS1-205ENST00000410093 SS18Q15532 418 aa9.46□□□□□ -0.89
LIMS1-205ENST00000410093 IGHV3OR16-9A0A0B4J2B5 98 aa9.46□□□□□ -0.9
LIMS1-205ENST00000410093 COX6CP09669 75 aa9.46□□□□□ -0.9
LIMS1-205ENST00000410093 SCGB1C2P0DMR2 95 aa9.46□□□□□ -0.9
LIMS1-205ENST00000410093 RBX1P62877 108 aa9.46□□□□□ -0.9
LIMS1-205ENST00000410093 MRPL23Q16540 153 aaKnown RBP9.46□□□□□ -0.9
LIMS1-205ENST00000410093 ADAMTSL4-AS1Q5T5F5 129 aa9.46□□□□□ -0.9
LIMS1-205ENST00000410093 PSMB2P49721 201 aa9.45□□□□□ -0.9
LIMS1-205ENST00000410093 EGFEM1PQ0D2K5 195 aa9.45□□□□□ -0.9
LIMS1-205ENST00000410093 COX7B2Q8TF08 81 aa9.45□□□□□ -0.9
LIMS1-205ENST00000410093 NOTCH1P46531 2555 aa9.45□□□□□ -0.9
LIMS1-205ENST00000410093 IGLV4-60A0A075B6I1 120 aa9.44□□□□□ -0.9
LIMS1-205ENST00000410093 LINC00959A0A1B0GUT2 108 aa9.44□□□□□ -0.9
LIMS1-205ENST00000410093 KPRPQ5T749 579 aaPredicted RBP9.44□□□□□ -0.9
LIMS1-205ENST00000410093 PRO0461Q9UI25 63 aa9.44□□□□□ -0.9
LIMS1-205ENST00000410093 TMEM262E9PQX1 116 aa9.43□□□□□ -0.9
LIMS1-205ENST00000410093 Q1RN00 199 aa9.43□□□□□ -0.9
LIMS1-205ENST00000410093 MEIG1Q5JSS6 88 aa9.43□□□□□ -0.9
LIMS1-205ENST00000410093 LINC00308Q8TCZ7 52 aa9.43□□□□□ -0.9
LIMS1-205ENST00000410093 H3BNG1 76 aa9.42□□□□□ -0.9
LIMS1-205ENST00000410093 PRB2P02812 416 aaPredicted RBP9.42□□□□□ -0.9
LIMS1-205ENST00000410093 MRAPQ8TCY5 172 aa9.42□□□□□ -0.9
LIMS1-205ENST00000410093 ICOSQ9Y6W8 199 aa9.42□□□□□ -0.9
LIMS1-205ENST00000410093 ATXN8Q156A1 80 aa9.41□□□□□ -0.9
LIMS1-205ENST00000410093 IBA57-AS1B1ANH7 110 aa9.41□□□□□ -0.9
LIMS1-205ENST00000410093 TCL1BO95988 128 aa9.41□□□□□ -0.9
LIMS1-205ENST00000410093 WFDC2Q14508 124 aa9.41□□□□□ -0.9
LIMS1-205ENST00000410093 LELP1Q5T871 98 aa9.41□□□□□ -0.9
LIMS1-205ENST00000410093 LINC01600Q96MT4 127 aa9.41□□□□□ -0.9
LIMS1-205ENST00000410093 EIF4EBP3O60516 100 aaPredicted RBP9.4□□□□□ -0.91
LIMS1-205ENST00000410093 VPS25Q9BRG1 176 aa9.4□□□□□ -0.91
LIMS1-205ENST00000410093 Q8IZM0 81 aa9.39□□□□□ -0.91
LIMS1-205ENST00000410093 C11orf68Q9H3H3 251 aaKnown RBP9.39□□□□□ -0.91
LIMS1-205ENST00000410093 CXCL5P42830 114 aa9.38□□□□□ -0.91
LIMS1-205ENST00000410093 CD164L2Q6UWJ8 174 aa9.38□□□□□ -0.91
LIMS1-205ENST00000410093 RNF151Q2KHN1 245 aa9.37□□□□□ -0.91
LIMS1-205ENST00000410093 DEFB121Q5J5C9 76 aa9.37□□□□□ -0.91
LIMS1-205ENST00000410093 CELA1Q9UNI1 258 aa9.37□□□□□ -0.91
LIMS1-205ENST00000410093 PRKDCP78527 4128 aaKnown RBP9.37□□□□□ -0.91
LIMS1-205ENST00000410093 TRAV13-2A0A0B4J235 113 aa9.36□□□□□ -0.91
LIMS1-205ENST00000410093 IGKV3OR2-268A0A0C4DH90 116 aa9.36□□□□□ -0.91
LIMS1-205ENST00000410093 MUC7Q8TAX7 377 aa9.36□□□□□ -0.91
LIMS1-205ENST00000410093 DEFB4AO15263 64 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms