RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 APOC3P02656 99 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 BAGE2Q86Y30 109 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 C9orf62Q8N4C0 152 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 TSTD1Q8NFU3 115 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 PPIP5K1Q6PFW1 1433 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 ARHGEF5Q12774 1597 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 A0A0G2JMZ2 1700 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 DNAH2Q9P225 4427 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 SHROOM2Q13796 1616 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 TRAV13-2A0A0B4J235 113 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 LINC00959A0A1B0GUT2 108 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 TPPP2P59282 170 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 RPS25P62851 125 aaKnown RBP-0.64□□□□□ -2.51
PMS1-203ENST00000409593 DPH3Q96FX2 82 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 USMG5Q96IX5 58 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 AQP10Q96PS8 301 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 NDUFA4L2Q9NRX3 87 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 APLNQ9ULZ1 77 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 XRN1Q8IZH2 1706 aaKnown RBP-0.64□□□□□ -2.51
PMS1-203ENST00000409593 ARAP2Q8WZ64 1704 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 QRICH2Q9H0J4 1663 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 COL12A1Q99715 3063 aa-0.64□□□□□ -2.51
PMS1-203ENST00000409593 NKTRP30414 1462 aaKnown RBP-0.64□□□□□ -2.51
PMS1-203ENST00000409593 PLECQ15149 4684 aaKnown RBP-0.65□□□□□ -2.51
PMS1-203ENST00000409593 F8VRH5 84 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 ACACBO00763 2458 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 GUCA1AP43080 201 aaPredicted RBP-0.65□□□□□ -2.51
PMS1-203ENST00000409593 C10orf128Q5T292 105 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 ANP32BQ92688 251 aaKnown RBP-0.65□□□□□ -2.51
PMS1-203ENST00000409593 LSM10Q969L4 123 aaKnown RBP-0.65□□□□□ -2.51
PMS1-203ENST00000409593 TPT1P8Q9HAU6 139 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 MARF1Q9Y4F3 1742 aaKnown RBP-0.65□□□□□ -2.51
PMS1-203ENST00000409593 MYO18BQ8IUG5 2567 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 PATJQ8NI35 1801 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 SPEF2Q9C093 1822 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 TNRC18O15417 2968 aaPredicted RBP-0.65□□□□□ -2.51
PMS1-203ENST00000409593 CCDC141Q6ZP82 1450 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 TROQ12816 1431 aaPredicted RBP-0.65□□□□□ -2.51
PMS1-203ENST00000409593 DOCK2Q92608 1830 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 TRBV7-3A0A075B6L6 115 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 DR1Q01658 176 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 SMIM21Q3B7S5 101 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 KRTAP19-6Q3LI70 58 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 KCNRGQ8N5I3 272 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 TTC9CQ8N5M4 171 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 Q8N8P6 123 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 SCN7AQ01118 1682 aa-0.65□□□□□ -2.51
PMS1-203ENST00000409593 REV3LO60673 3130 aa-0.66□□□□□ -2.51
PMS1-203ENST00000409593 LAMA2P24043 3122 aaKnown RBP-0.66□□□□□ -2.52
PMS1-203ENST00000409593 IGLC7A0M8Q6 106 aa-0.66□□□□□ -2.52
PMS1-203ENST00000409593 CPSF4LA6NMK7 179 aaKnown RBP-0.66□□□□□ -2.52
PMS1-203ENST00000409593 H0YGG7 62 aa-0.66□□□□□ -2.52
PMS1-203ENST00000409593 HIST1H1DP16402 221 aaKnown RBP-0.66□□□□□ -2.52
PMS1-203ENST00000409593 COPZ1P61923 177 aa-0.66□□□□□ -2.52
PMS1-203ENST00000409593 H1FX-AS1Q4G0G2 97 aa-0.66□□□□□ -2.52
PMS1-203ENST00000409593 C10orf113Q5VZT2 155 aa-0.66□□□□□ -2.52
PMS1-203ENST00000409593 TMEM263Q8WUH6 116 aaKnown RBP-0.66□□□□□ -2.52
PMS1-203ENST00000409593 DYNLRB1Q9NP97 96 aa-0.66□□□□□ -2.52
PMS1-203ENST00000409593 LINC01558Q9Y6Z2 57 aa-0.66□□□□□ -2.52
PMS1-203ENST00000409593 NUP188Q5SRE5 1749 aa-0.66□□□□□ -2.52
PMS1-203ENST00000409593 C1orf167Q5SNV9 1468 aa-0.66□□□□□ -2.52
PMS1-203ENST00000409593 BTAF1O14981 1849 aa-0.66□□□□□ -2.52
PMS1-203ENST00000409593 TET3O43151 1660 aa-0.67□□□□□ -2.52
PMS1-203ENST00000409593 PKD1L2Q7Z442 2459 aa-0.67□□□□□ -2.52
PMS1-203ENST00000409593 EHBP1L1Q8N3D4 1523 aa-0.67□□□□□ -2.52
PMS1-203ENST00000409593 SSSCA1O60232 199 aa-0.67□□□□□ -2.52
PMS1-203ENST00000409593 SFT2D2O95562 160 aa-0.67□□□□□ -2.52
PMS1-203ENST00000409593 MGPP08493 103 aa-0.67□□□□□ -2.52
PMS1-203ENST00000409593 LINC01600Q96MT4 127 aa-0.67□□□□□ -2.52
PMS1-203ENST00000409593 MGST2Q99735 147 aa-0.67□□□□□ -2.52
PMS1-203ENST00000409593 TMEM191AQ9H0A3 160 aa-0.67□□□□□ -2.52
PMS1-203ENST00000409593 COPZ2Q9P299 210 aa-0.67□□□□□ -2.52
PMS1-203ENST00000409593 USP9XQ93008 2570 aaPredicted RBP-0.67□□□□□ -2.52
PMS1-203ENST00000409593 GRIN2AQ12879 1464 aa-0.67□□□□□ -2.52
PMS1-203ENST00000409593 MGAM2Q2M2H8 2515 aa-0.67□□□□□ -2.52
PMS1-203ENST00000409593 TACC2O95359 2948 aa-0.67□□□□□ -2.52
PMS1-203ENST00000409593 SMG6Q86US8 1419 aaKnown RBP-0.67□□□□□ -2.52
PMS1-203ENST00000409593 KIAA1551Q9HCM1 1747 aa-0.68□□□□□ -2.52
PMS1-203ENST00000409593 PIGBOS1A0A0B4J2F0 54 aa-0.68□□□□□ -2.52
PMS1-203ENST00000409593 HMGN4O00479 90 aa-0.68□□□□□ -2.52
PMS1-203ENST00000409593 C12orf73Q69YU5 71 aa-0.68□□□□□ -2.52
PMS1-203ENST00000409593 DIP2CQ9Y2E4 1556 aa-0.68□□□□□ -2.52
PMS1-203ENST00000409593 CICQ96RK0 1608 aaPredicted RBP-0.68□□□□□ -2.52
PMS1-203ENST00000409593 EDC4Q6P2E9 1401 aaKnown RBP-0.68□□□□□ -2.52
PMS1-203ENST00000409593 CFTRP13569 1480 aa-0.68□□□□□ -2.52
PMS1-203ENST00000409593 PLEKHH2Q8IVE3 1493 aa-0.68□□□□□ -2.52
PMS1-203ENST00000409593 NLRP1Q9C000 1473 aa-0.68□□□□□ -2.52
PMS1-203ENST00000409593 SPG11Q96JI7 2443 aa-0.68□□□□□ -2.52
PMS1-203ENST00000409593 LOC105371267A0A1B0GV96 52 aa-0.69□□□□□ -2.52
PMS1-203ENST00000409593 LOC285095A0A1B0GVY8 99 aa-0.69□□□□□ -2.52
PMS1-203ENST00000409593 H3BNG1 76 aa-0.69□□□□□ -2.52
PMS1-203ENST00000409593 SMCO1Q147U7 214 aa-0.69□□□□□ -2.52
PMS1-203ENST00000409593 FDCSPQ8NFU4 85 aa-0.69□□□□□ -2.52
PMS1-203ENST00000409593 LZICQ8WZA0 190 aa-0.69□□□□□ -2.52
PMS1-203ENST00000409593 FAM167A-AS1Q96KT0 104 aa-0.69□□□□□ -2.52
PMS1-203ENST00000409593 SPRR4Q96PI1 79 aa-0.69□□□□□ -2.52
PMS1-203ENST00000409593 FAIMQ9NVQ4 179 aa-0.69□□□□□ -2.52
PMS1-203ENST00000409593 ANKRD50Q9ULJ7 1429 aa-0.69□□□□□ -2.52
PMS1-203ENST00000409593 NCOA3Q9Y6Q9 1424 aa-0.69□□□□□ -2.52
PMS1-203ENST00000409593 DSPP15924 2871 aaKnown RBP-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms