RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 IGLV4-3A0A075B6K6 122 aa8.74□□□□□ -1.01
CHRNA1-205ENST00000409542 IGHV3-53P01767 116 aa8.74□□□□□ -1.01
CHRNA1-205ENST00000409542 DMBT1Q9UGM3 2413 aaPredicted RBP8.74□□□□□ -1.01
CHRNA1-205ENST00000409542 DEFB104AQ8WTQ1 72 aa8.73□□□□□ -1.01
CHRNA1-205ENST00000409542 IGHV3-73A0A0B4J1V6 119 aa8.72□□□□□ -1.01
CHRNA1-205ENST00000409542 GAGE12BA1L429 117 aa8.72□□□□□ -1.01
CHRNA1-205ENST00000409542 EPM2AB3EWF7 344 aa8.72□□□□□ -1.01
CHRNA1-205ENST00000409542 K7ERJ3 54 aa8.72□□□□□ -1.01
CHRNA1-205ENST00000409542 ATP5G1P05496 136 aa8.72□□□□□ -1.01
CHRNA1-205ENST00000409542 INAFM2P0DMQ5 153 aa8.72□□□□□ -1.01
CHRNA1-205ENST00000409542 TMEM170BQ5T4T1 132 aa8.72□□□□□ -1.01
CHRNA1-205ENST00000409542 NAA38Q9BRA0 125 aaKnown RBP8.72□□□□□ -1.01
CHRNA1-205ENST00000409542 SPCS1Q9Y6A9 102 aa8.72□□□□□ -1.01
CHRNA1-205ENST00000409542 TMEM223A0PJW6 202 aa8.71□□□□□ -1.01
CHRNA1-205ENST00000409542 LEPROTO15243 131 aa8.71□□□□□ -1.01
CHRNA1-205ENST00000409542 SCGB1D4Q6XE38 83 aa8.71□□□□□ -1.01
CHRNA1-205ENST00000409542 Q6ZSN1 163 aa8.71□□□□□ -1.01
CHRNA1-205ENST00000409542 RNASE8Q8TDE3 154 aaKnown RBP8.71□□□□□ -1.01
CHRNA1-205ENST00000409542 PLEKHB2Q96CS7 222 aa8.71□□□□□ -1.01
CHRNA1-205ENST00000409542 AMELXQ99217 191 aa8.71□□□□□ -1.01
CHRNA1-205ENST00000409542 VCX2Q9H322 139 aa8.71□□□□□ -1.01
CHRNA1-205ENST00000409542 SPANXB1Q9NS25 103 aaPredicted RBP8.71□□□□□ -1.01
CHRNA1-205ENST00000409542 SPANXA1Q9NS26 97 aa8.71□□□□□ -1.01
CHRNA1-205ENST00000409542 MRPL16Q9NX20 251 aaKnown RBP8.71□□□□□ -1.01
CHRNA1-205ENST00000409542 TMEM238LA0A1B0GVL6 79 aa8.7□□□□□ -1.02
CHRNA1-205ENST00000409542 A6NJY4 79 aa8.7□□□□□ -1.02
CHRNA1-205ENST00000409542 ZNF22P17026 224 aaPredicted RBP8.7□□□□□ -1.02
CHRNA1-205ENST00000409542 XGP55808 180 aa8.7□□□□□ -1.02
CHRNA1-205ENST00000409542 OPRPNQ99935 248 aaPredicted RBP8.7□□□□□ -1.02
CHRNA1-205ENST00000409542 A0A0J9YY99 117 aa8.7□□□□□ -1.02
CHRNA1-205ENST00000409542 J3QQQ9 107 aa8.7□□□□□ -1.02
CHRNA1-205ENST00000409542 TSPEAR-AS2P59090 65 aa8.7□□□□□ -1.02
CHRNA1-205ENST00000409542 ESRGQ1W209 222 aa8.7□□□□□ -1.02
CHRNA1-205ENST00000409542 CHCHD7Q9BUK0 85 aa8.7□□□□□ -1.02
CHRNA1-205ENST00000409542 LGALS3P17931 250 aaKnown RBP8.69□□□□□ -1.02
CHRNA1-205ENST00000409542 OCIAD2Q56VL3 154 aa8.69□□□□□ -1.02
CHRNA1-205ENST00000409542 FAM104AQ969W3 186 aa8.69□□□□□ -1.02
CHRNA1-205ENST00000409542 CBY1Q9Y3M2 126 aa8.69□□□□□ -1.02
CHRNA1-205ENST00000409542 UBE2D1P51668 147 aa8.68□□□□□ -1.02
CHRNA1-205ENST00000409542 RBX1P62877 108 aa8.68□□□□□ -1.02
CHRNA1-205ENST00000409542 MRPS36P82909 103 aaKnown RBP8.68□□□□□ -1.02
CHRNA1-205ENST00000409542 COTL1Q14019 142 aa8.68□□□□□ -1.02
CHRNA1-205ENST00000409542 Q6ZRN7 208 aaPredicted RBP8.68□□□□□ -1.02
CHRNA1-205ENST00000409542 TMEM263Q8WUH6 116 aaKnown RBP8.68□□□□□ -1.02
CHRNA1-205ENST00000409542 ZNF479Q96JC4 524 aa8.68□□□□□ -1.02
CHRNA1-205ENST00000409542 NOP10Q9NPE3 64 aaKnown RBP8.68□□□□□ -1.02
CHRNA1-205ENST00000409542 TRAV26-1A0A087WT03 109 aa8.67□□□□□ -1.02
CHRNA1-205ENST00000409542 A0A0J9YXV3 536 aa8.67□□□□□ -1.02
CHRNA1-205ENST00000409542 SRSF9Q13242 221 aaKnown RBP eCLIP8.67□□□□□ -1.02
CHRNA1-205ENST00000409542 SLC25A29Q8N8R3 303 aa8.67□□□□□ -1.02
CHRNA1-205ENST00000409542 UPK3BQ9BT76 320 aa8.67□□□□□ -1.02
CHRNA1-205ENST00000409542 TIMM21Q9BVV7 248 aa8.67□□□□□ -1.02
CHRNA1-205ENST00000409542 UBE2D4Q9Y2X8 147 aa8.67□□□□□ -1.02
CHRNA1-205ENST00000409542 FLG2Q5D862 2391 aaPredicted RBP8.66□□□□□ -1.02
CHRNA1-205ENST00000409542 TRBV10-1A0A0K0K1A3 114 aa8.66□□□□□ -1.02
CHRNA1-205ENST00000409542 TTC32Q5I0X7 151 aa8.66□□□□□ -1.02
CHRNA1-205ENST00000409542 Q5VSD8 79 aa8.66□□□□□ -1.02
CHRNA1-205ENST00000409542 TRGV1A0A0A0MS02 117 aa8.65□□□□□ -1.02
CHRNA1-205ENST00000409542 TRAV4A0A0B4J268 109 aa8.65□□□□□ -1.02
CHRNA1-205ENST00000409542 TINCRA0A1B0GVN0 87 aa8.65□□□□□ -1.02
CHRNA1-205ENST00000409542 DAZ2Q13117 558 aaKnown RBP8.65□□□□□ -1.02
CHRNA1-205ENST00000409542 C16orf74Q96GX8 76 aa8.65□□□□□ -1.02
CHRNA1-205ENST00000409542 Q9UF83 564 aa8.65□□□□□ -1.02
CHRNA1-205ENST00000409542 SRRM2Q9UQ35 2752 aaKnown RBP8.65□□□□□ -1.03
CHRNA1-205ENST00000409542 K7ERU9 68 aa8.64□□□□□ -1.03
CHRNA1-205ENST00000409542 IGHV3-30P01768 117 aa8.64□□□□□ -1.03
CHRNA1-205ENST00000409542 IGHV3-30-5P0DP03 117 aa8.64□□□□□ -1.03
CHRNA1-205ENST00000409542 LINC00612Q8N6U2 182 aa8.64□□□□□ -1.03
CHRNA1-205ENST00000409542 CIDEAO60543 219 aa8.64□□□□□ -1.03
CHRNA1-205ENST00000409542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.63□□□□□ -1.03
CHRNA1-205ENST00000409542 IGKV2-29A2NJV5 120 aaPredicted RBP8.63□□□□□ -1.03
CHRNA1-205ENST00000409542 K7EQD1 137 aa8.63□□□□□ -1.03
CHRNA1-205ENST00000409542 GAGE7O76087 117 aa8.63□□□□□ -1.03
CHRNA1-205ENST00000409542 SMR3BP02814 79 aaPredicted RBP8.63□□□□□ -1.03
CHRNA1-205ENST00000409542 GAGE12FP0CL80 117 aa8.63□□□□□ -1.03
CHRNA1-205ENST00000409542 GAGE12GP0CL81 117 aa8.63□□□□□ -1.03
CHRNA1-205ENST00000409542 GAGE12IP0CL82 117 aa8.63□□□□□ -1.03
CHRNA1-205ENST00000409542 KRTAP10-1P60331 282 aa8.63□□□□□ -1.03
CHRNA1-205ENST00000409542 RPL36AP83881 106 aaKnown RBP8.63□□□□□ -1.03
CHRNA1-205ENST00000409542 Q6ZUT4 128 aa8.63□□□□□ -1.03
CHRNA1-205ENST00000409542 RPL36ALQ969Q0 106 aaKnown RBP8.63□□□□□ -1.03
CHRNA1-205ENST00000409542 PGPEP1Q9NXJ5 209 aa8.63□□□□□ -1.03
CHRNA1-205ENST00000409542 IGHV3-38A0A0C4DH36 116 aa8.62□□□□□ -1.03
CHRNA1-205ENST00000409542 IGHV3-30-3P0DP02 117 aa8.62□□□□□ -1.03
CHRNA1-205ENST00000409542 TIRAPP58753 221 aa8.62□□□□□ -1.03
CHRNA1-205ENST00000409542 Q6ZTI0 123 aa8.62□□□□□ -1.03
CHRNA1-205ENST00000409542 DAZ4Q86SG3 579 aaKnown RBP8.62□□□□□ -1.03
CHRNA1-205ENST00000409542 VSIG2Q96IQ7 327 aa8.62□□□□□ -1.03
CHRNA1-205ENST00000409542 DAZ3Q9NR90 486 aaKnown RBP8.62□□□□□ -1.03
CHRNA1-205ENST00000409542 A0A096LPF7 62 aa8.61□□□□□ -1.03
CHRNA1-205ENST00000409542 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
CHRNA1-205ENST00000409542 TMEM238C9JI98 176 aa8.61□□□□□ -1.03
CHRNA1-205ENST00000409542 F8W1H4 67 aa8.61□□□□□ -1.03
CHRNA1-205ENST00000409542 SMAGPQ0VAQ4 97 aa8.61□□□□□ -1.03
CHRNA1-205ENST00000409542 IGLV5-45A0A087WSX0 123 aa8.6□□□□□ -1.03
CHRNA1-205ENST00000409542 TSPAN13O95857 204 aa8.6□□□□□ -1.03
CHRNA1-205ENST00000409542 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
CHRNA1-205ENST00000409542 UBE2D3P61077 147 aa8.6□□□□□ -1.03
CHRNA1-205ENST00000409542 UBE2D2P62837 147 aa8.6□□□□□ -1.03
CHRNA1-205ENST00000409542 LYRM7Q5U5X0 104 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms