RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 NPC2P61916 151 aa7.75□□□□□ -1.17
NIF3L1-204ENST00000409357 SPATA3Q8NHX4 192 aa7.75□□□□□ -1.17
NIF3L1-204ENST00000409357 LINC00308Q8TCZ7 52 aa7.75□□□□□ -1.17
NIF3L1-204ENST00000409357 FAM104AQ969W3 186 aa7.75□□□□□ -1.17
NIF3L1-204ENST00000409357 C20orf173Q96LM9 149 aa7.75□□□□□ -1.17
NIF3L1-204ENST00000409357 CCDC140Q96MF4 163 aa7.75□□□□□ -1.17
NIF3L1-204ENST00000409357 RPL28P46779 137 aaKnown RBP7.74□□□□□ -1.17
NIF3L1-204ENST00000409357 DSCR8Q96T75 97 aa7.74□□□□□ -1.17
NIF3L1-204ENST00000409357 UBE2D4Q9Y2X8 147 aa7.74□□□□□ -1.17
NIF3L1-204ENST00000409357 IGF1P05019 195 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 PFN2P35080 140 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 LINC01561Q8N1V8 128 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 OPRPNQ99935 248 aaPredicted RBP7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 ESM1Q9NQ30 184 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 MGAM2Q2M2H8 2515 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 MUC4Q99102 2169 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 IGHV3-64A0A075B6Q5 118 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 F5H697 171 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 J3QLI3 93 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 DNAL4O96015 105 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 HIST2H2BDQ6DRA6 164 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 LYPD5Q6UWN5 251 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 FAM19A3Q7Z5A8 133 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 ZNF580Q9UK33 172 aa7.73□□□□□ -1.17
NIF3L1-204ENST00000409357 VWFP04275 2813 aa7.72□□□□□ -1.17
NIF3L1-204ENST00000409357 IGLV5-39A0A0G2JS06 123 aa7.72□□□□□ -1.17
NIF3L1-204ENST00000409357 IGHV4-38-2P0DP08 117 aa7.72□□□□□ -1.17
NIF3L1-204ENST00000409357 RPL11P62913 178 aaKnown RBP7.72□□□□□ -1.17
NIF3L1-204ENST00000409357 Q6ZSV7 163 aa7.72□□□□□ -1.17
NIF3L1-204ENST00000409357 RNF152Q8N8N0 203 aa7.72□□□□□ -1.17
NIF3L1-204ENST00000409357 Q8N9W7 124 aa7.72□□□□□ -1.17
NIF3L1-204ENST00000409357 H0YGX0 51 aa7.71□□□□□ -1.18
NIF3L1-204ENST00000409357 IGHG2P01859 326 aa7.71□□□□□ -1.18
NIF3L1-204ENST00000409357 CD28P10747 220 aa7.71□□□□□ -1.18
NIF3L1-204ENST00000409357 LCE2CQ5TA81 110 aa7.71□□□□□ -1.18
NIF3L1-204ENST00000409357 TRAV13-2A0A0B4J235 113 aa7.7□□□□□ -1.18
NIF3L1-204ENST00000409357 IGHV3-16A0A0C4DH30 117 aa7.7□□□□□ -1.18
NIF3L1-204ENST00000409357 FAM223BA6NKX1 122 aa7.7□□□□□ -1.18
NIF3L1-204ENST00000409357 HILS1P60008 231 aa7.7□□□□□ -1.18
NIF3L1-204ENST00000409357 PIK3CD-AS1Q5SR53 167 aa7.7□□□□□ -1.18
NIF3L1-204ENST00000409357 CLEC19AQ6UXS0 136 aa7.7□□□□□ -1.18
NIF3L1-204ENST00000409357 FAM223AQ8IWN6 122 aa7.7□□□□□ -1.18
NIF3L1-204ENST00000409357 SMIM26A0A096LP01 95 aa7.7□□□□□ -1.18
NIF3L1-204ENST00000409357 FAM236DA0A1B0GTK5 79 aa7.7□□□□□ -1.18
NIF3L1-204ENST00000409357 NDUFA4O00483 81 aa7.7□□□□□ -1.18
NIF3L1-204ENST00000409357 FAM236CP0DP71 79 aa7.7□□□□□ -1.18
NIF3L1-204ENST00000409357 PRB3Q04118 309 aaPredicted RBP7.7□□□□□ -1.18
NIF3L1-204ENST00000409357 A0A087WWL8 130 aa7.69□□□□□ -1.18
NIF3L1-204ENST00000409357 IGHV3-66A0A0C4DH42 116 aa7.69□□□□□ -1.18
NIF3L1-204ENST00000409357 FHL2Q14192 279 aa7.69□□□□□ -1.18
NIF3L1-204ENST00000409357 BRD3OSQ6XYD6 125 aa7.69□□□□□ -1.18
NIF3L1-204ENST00000409357 Q8N2B8 174 aa7.69□□□□□ -1.18
NIF3L1-204ENST00000409357 MEGF8Q7Z7M0 2845 aa7.68□□□□□ -1.18
NIF3L1-204ENST00000409357 IGHV3OR16-8A0A075B7F1 116 aa7.68□□□□□ -1.18
NIF3L1-204ENST00000409357 LINC00846Q9NV44 126 aa7.68□□□□□ -1.18
NIF3L1-204ENST00000409357 IGHV3-35A0A0C4DH35 117 aa7.67□□□□□ -1.18
NIF3L1-204ENST00000409357 DNAJC9-AS1A6NH13 148 aa7.67□□□□□ -1.18
NIF3L1-204ENST00000409357 FAM229AH3BQW9 127 aa7.67□□□□□ -1.18
NIF3L1-204ENST00000409357 ATP5EP56381 51 aaPredicted RBP7.67□□□□□ -1.18
NIF3L1-204ENST00000409357 LINC00336Q6ZUF6 198 aa7.67□□□□□ -1.18
NIF3L1-204ENST00000409357 TMEM86BQ8N661 226 aa7.67□□□□□ -1.18
NIF3L1-204ENST00000409357 FAM218AQ96MZ4 157 aa7.67□□□□□ -1.18
NIF3L1-204ENST00000409357 RBMY1BA6NDE4 496 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-204ENST00000409357 RBMY1EA6NEQ0 496 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-204ENST00000409357 RBMY1DP0C7P1 496 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-204ENST00000409357 RBMY1A1P0DJD3 496 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-204ENST00000409357 RBMY1CP0DJD4 496 aa7.66□□□□□ -1.18
NIF3L1-204ENST00000409357 KLKP1Q107X0 134 aa7.66□□□□□ -1.18
NIF3L1-204ENST00000409357 RBMY1FQ15415 496 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-204ENST00000409357 C19orf54Q5BKX5 351 aa7.66□□□□□ -1.18
NIF3L1-204ENST00000409357 TMEM243Q9BU79 118 aa7.66□□□□□ -1.18
NIF3L1-204ENST00000409357 SIRPDQ9H106 197 aa7.66□□□□□ -1.18
NIF3L1-204ENST00000409357 CCKP06307 115 aa7.65□□□□□ -1.18
NIF3L1-204ENST00000409357 XCL1P47992 114 aa7.65□□□□□ -1.18
NIF3L1-204ENST00000409357 DEFB112Q30KQ8 113 aa7.65□□□□□ -1.18
NIF3L1-204ENST00000409357 C16orf95Q9H693 158 aa7.65□□□□□ -1.18
NIF3L1-204ENST00000409357 XCL2Q9UBD3 114 aa7.65□□□□□ -1.18
NIF3L1-204ENST00000409357 CMYA5Q8N3K9 4069 aa7.65□□□□□ -1.18
NIF3L1-204ENST00000409357 NOTCH1P46531 2555 aa7.64□□□□□ -1.19
NIF3L1-204ENST00000409357 TRAV7A0A075B6U4 112 aa7.64□□□□□ -1.19
NIF3L1-204ENST00000409357 IGHV3OR16-13A0A075B7E8 117 aa7.64□□□□□ -1.19
NIF3L1-204ENST00000409357 IGHV3-74A0A0B4J1X5 117 aa7.64□□□□□ -1.19
NIF3L1-204ENST00000409357 TRAV12-3A0A0B4J271 114 aa7.64□□□□□ -1.19
NIF3L1-204ENST00000409357 IGKV3D-7A0A0C4DH55 119 aa7.64□□□□□ -1.19
NIF3L1-204ENST00000409357 ATP6V0E1O15342 81 aa7.64□□□□□ -1.19
NIF3L1-204ENST00000409357 NDUFC1O43677 76 aa7.64□□□□□ -1.19
NIF3L1-204ENST00000409357 SOSTDC1Q6X4U4 206 aa7.64□□□□□ -1.19
NIF3L1-204ENST00000409357 ZNF625Q96I27 306 aaPredicted RBP7.64□□□□□ -1.19
NIF3L1-204ENST00000409357 CHCHD7Q9BUK0 85 aa7.64□□□□□ -1.19
NIF3L1-204ENST00000409357 H3BUA1 57 aa7.63□□□□□ -1.19
NIF3L1-204ENST00000409357 H7BZZ5 65 aa7.63□□□□□ -1.19
NIF3L1-204ENST00000409357 WNK1Q9H4A3 2382 aa7.63□□□□□ -1.19
NIF3L1-204ENST00000409357 TMEM89A2RUT3 159 aa7.63□□□□□ -1.19
NIF3L1-204ENST00000409357 KNCNA6PVL3 124 aa7.63□□□□□ -1.19
NIF3L1-204ENST00000409357 JMJD7-PLA2G4BH0Y9G9 81 aa7.63□□□□□ -1.19
NIF3L1-204ENST00000409357 Q9H8V8 135 aa7.63□□□□□ -1.19
NIF3L1-204ENST00000409357 CDKN2A-AS1Q9UH64 79 aa7.63□□□□□ -1.19
NIF3L1-204ENST00000409357 NACAE9PAV3 2078 aa7.62□□□□□ -1.19
NIF3L1-204ENST00000409357 IGHV1OR15-1A0A075B7D0 117 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms