RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 COL5A1P20908 1838 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-202ENST00000409031 MRGPRG-AS1Q2M3A8 158 aa12.87□□□□□ -0.35
SMPD4-202ENST00000409031 CHCHD7Q9BUK0 85 aa12.87□□□□□ -0.35
SMPD4-202ENST00000409031 CHKB-CPT1BH3BT56 60 aa12.87□□□□□ -0.35
SMPD4-202ENST00000409031 LYRM9A8MSI8 78 aa12.87□□□□□ -0.35
SMPD4-202ENST00000409031 A0A087WYN8 130 aa12.87□□□□□ -0.35
SMPD4-202ENST00000409031 COX17Q14061 63 aa12.86□□□□□ -0.35
SMPD4-202ENST00000409031 Q8N814 137 aa12.86□□□□□ -0.35
SMPD4-202ENST00000409031 MUC7Q8TAX7 377 aa12.85□□□□□ -0.35
SMPD4-202ENST00000409031 LINC00959A0A1B0GUT2 108 aa12.85□□□□□ -0.35
SMPD4-202ENST00000409031 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-202ENST00000409031 CD164L2Q6UWJ8 174 aa12.84□□□□□ -0.35
SMPD4-202ENST00000409031 Q8IZM0 81 aa12.84□□□□□ -0.35
SMPD4-202ENST00000409031 KIF25-AS1Q9Y6Z4 181 aa12.84□□□□□ -0.35
SMPD4-202ENST00000409031 C11orf71Q6IPW1 123 aa12.83□□□□□ -0.36
SMPD4-202ENST00000409031 XAGE1AQ9HD64 81 aa12.83□□□□□ -0.36
SMPD4-202ENST00000409031 IGLV1-40P01703 118 aa12.82□□□□□ -0.36
SMPD4-202ENST00000409031 TRBV10-3A0A0K0K1G6 114 aa12.82□□□□□ -0.36
SMPD4-202ENST00000409031 COX6A2Q02221 97 aa12.82□□□□□ -0.36
SMPD4-202ENST00000409031 SOSTDC1Q6X4U4 206 aa12.82□□□□□ -0.36
SMPD4-202ENST00000409031 C9orf66Q5T8R8 295 aa12.81□□□□□ -0.36
SMPD4-202ENST00000409031 Q8N3U1 123 aa12.81□□□□□ -0.36
SMPD4-202ENST00000409031 C3orf84H3BNL1 204 aa12.81□□□□□ -0.36
SMPD4-202ENST00000409031 FAM19A1Q7Z5A9 133 aa12.81□□□□□ -0.36
SMPD4-202ENST00000409031 C1orf158Q8N1D5 194 aa12.8□□□□□ -0.36
SMPD4-202ENST00000409031 OTOGLQ3ZCN5 2332 aa12.8□□□□□ -0.36
SMPD4-202ENST00000409031 EXPH5Q8NEV8 1989 aa12.78□□□□□ -0.36
SMPD4-202ENST00000409031 PRM2P04554 102 aa12.77□□□□□ -0.36
SMPD4-202ENST00000409031 DEFB135Q30KP9 77 aa12.77□□□□□ -0.36
SMPD4-202ENST00000409031 A0A087WZ39 114 aa12.77□□□□□ -0.37
SMPD4-202ENST00000409031 H0Y9J4 135 aa12.77□□□□□ -0.37
SMPD4-202ENST00000409031 PRYO14603 147 aa12.77□□□□□ -0.37
SMPD4-202ENST00000409031 ADAMTS20P59510 1910 aa12.77□□□□□ -0.37
SMPD4-202ENST00000409031 C10orf99Q6UWK7 81 aa12.76□□□□□ -0.37
SMPD4-202ENST00000409031 A6NED7 52 aa12.76□□□□□ -0.37
SMPD4-202ENST00000409031 MYO18BQ8IUG5 2567 aa12.76□□□□□ -0.37
SMPD4-202ENST00000409031 ZNF73O43830 326 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-202ENST00000409031 SONP18583 2426 aaKnown RBP12.75□□□□□ -0.37
SMPD4-202ENST00000409031 DEFB4AO15263 64 aa12.75□□□□□ -0.37
SMPD4-202ENST00000409031 BCE1O60756 84 aa12.74□□□□□ -0.37
SMPD4-202ENST00000409031 NOTCH2Q04721 2471 aa12.74□□□□□ -0.37
SMPD4-202ENST00000409031 M0R378 163 aa12.74□□□□□ -0.37
SMPD4-202ENST00000409031 LINC00315P59091 139 aa12.74□□□□□ -0.37
SMPD4-202ENST00000409031 PRR4Q16378 134 aa12.74□□□□□ -0.37
SMPD4-202ENST00000409031 DEFB121Q5J5C9 76 aa12.74□□□□□ -0.37
SMPD4-202ENST00000409031 TRBV7-6A0A0J9YX20 115 aa12.73□□□□□ -0.37
SMPD4-202ENST00000409031 HILS1P60008 231 aa12.73□□□□□ -0.37
SMPD4-202ENST00000409031 PMAIP1Q13794 54 aa12.73□□□□□ -0.37
SMPD4-202ENST00000409031 TMEM254Q8TBM7 123 aa12.73□□□□□ -0.37
SMPD4-202ENST00000409031 BRI3O95415 125 aa12.73□□□□□ -0.37
SMPD4-202ENST00000409031 LINC00337Q8N6G1 96 aa12.73□□□□□ -0.37
SMPD4-202ENST00000409031 LOC100131303A0A0U1RQF7 123 aa12.73□□□□□ -0.37
SMPD4-202ENST00000409031 Q6YL49 198 aa12.72□□□□□ -0.37
SMPD4-202ENST00000409031 CEP192Q8TEP8 1941 aa12.72□□□□□ -0.37
SMPD4-202ENST00000409031 C4orf26Q17RF5 130 aa12.72□□□□□ -0.37
SMPD4-202ENST00000409031 PIEZO2Q9H5I5 2752 aa12.72□□□□□ -0.37
SMPD4-202ENST00000409031 IGLV5-39A0A0G2JS06 123 aa12.72□□□□□ -0.37
SMPD4-202ENST00000409031 NHLRC4P0CG21 123 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-202ENST00000409031 DEFB113Q30KQ7 82 aa12.72□□□□□ -0.37
SMPD4-202ENST00000409031 Q6ZVQ6 151 aa12.71□□□□□ -0.38
SMPD4-202ENST00000409031 KIR2DL5BQ8NHK3 375 aa12.71□□□□□ -0.38
SMPD4-202ENST00000409031 FHL3Q13643 280 aa12.7□□□□□ -0.38
SMPD4-202ENST00000409031 WFDC10BQ8IUB3 73 aa12.7□□□□□ -0.38
SMPD4-202ENST00000409031 FAM30AQ9NZY2 134 aa12.7□□□□□ -0.38
SMPD4-202ENST00000409031 TLN1Q9Y490 2541 aaKnown RBP12.69□□□□□ -0.38
SMPD4-202ENST00000409031 UBE2AP49459 152 aa12.69□□□□□ -0.38
SMPD4-202ENST00000409031 DHRS4-AS1Q9P1J3 65 aa12.69□□□□□ -0.38
SMPD4-202ENST00000409031 LINC01547P58512 204 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-202ENST00000409031 NCOR2Q9Y618 2525 aa12.68□□□□□ -0.38
SMPD4-202ENST00000409031 BEAN1Q3B7T3 259 aa12.68□□□□□ -0.38
SMPD4-202ENST00000409031 CELA1Q9UNI1 258 aa12.68□□□□□ -0.38
SMPD4-202ENST00000409031 Q8N2B8 174 aa12.68□□□□□ -0.38
SMPD4-202ENST00000409031 IGKV4-1P06312 121 aa12.67□□□□□ -0.38
SMPD4-202ENST00000409031 ESRGQ1W209 222 aa12.67□□□□□ -0.38
SMPD4-202ENST00000409031 LRCOL1A6NCL2 159 aa12.66□□□□□ -0.38
SMPD4-202ENST00000409031 CXCL6P80162 114 aa12.66□□□□□ -0.38
SMPD4-202ENST00000409031 WFDC13Q8IUB5 93 aa12.66□□□□□ -0.38
SMPD4-202ENST00000409031 BBC3Q96PG8 261 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-202ENST00000409031 HIGD2AQ9BW72 106 aa12.66□□□□□ -0.38
SMPD4-202ENST00000409031 HIVEP2P31629 2446 aa12.66□□□□□ -0.38
SMPD4-202ENST00000409031 ZNF843Q8N446 348 aa12.65□□□□□ -0.38
SMPD4-202ENST00000409031 NAV2Q8IVL1 2488 aa12.65□□□□□ -0.38
SMPD4-202ENST00000409031 EDN2P20800 178 aa12.65□□□□□ -0.38
SMPD4-202ENST00000409031 PRR3P79522 188 aaKnown RBP12.65□□□□□ -0.39
SMPD4-202ENST00000409031 PTPRBP23467 1997 aa12.64□□□□□ -0.39
SMPD4-202ENST00000409031 SYCNQ0VAF6 134 aa12.64□□□□□ -0.39
SMPD4-202ENST00000409031 Q6ZSN1 163 aa12.64□□□□□ -0.39
SMPD4-202ENST00000409031 CYSRT1A8MQ03 144 aa12.63□□□□□ -0.39
SMPD4-202ENST00000409031 IGLV4-60A0A075B6I1 120 aa12.63□□□□□ -0.39
SMPD4-202ENST00000409031 SEC61GP60059 68 aa12.62□□□□□ -0.39
SMPD4-202ENST00000409031 LINC00575Q6W349 94 aa12.62□□□□□ -0.39
SMPD4-202ENST00000409031 ZNF702PQ9H963 129 aa12.62□□□□□ -0.39
SMPD4-202ENST00000409031 IGLV5-45A0A087WSX0 123 aa12.62□□□□□ -0.39
SMPD4-202ENST00000409031 FAM19A4Q96LR4 140 aa12.61□□□□□ -0.39
SMPD4-202ENST00000409031 UNQ6190/PRO20217Q6UXQ8 127 aa12.61□□□□□ -0.39
SMPD4-202ENST00000409031 FAM218AQ96MZ4 157 aa12.6□□□□□ -0.39
SMPD4-202ENST00000409031 DNAJC9-AS1A6NH13 148 aa12.6□□□□□ -0.39
SMPD4-202ENST00000409031 IGKV2-28A0A075B6P5 120 aa12.59□□□□□ -0.39
SMPD4-202ENST00000409031 IGKV2D-28P01615 120 aa12.59□□□□□ -0.39
SMPD4-202ENST00000409031 LELP1Q5T871 98 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms