RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SPTA1P02549 2419 aa2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 PLXNB1O43157 2135 aa2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 C7orf71A4D174 169 aa2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 F5H768 121 aa2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 M0R381 172 aa2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 DLEU1O43261 78 aa2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 PPP1R17O96001 155 aa2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 FGF6P10767 208 aa2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 ZNF25P17030 456 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 HINT1P49773 126 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 TMEM86BQ8N661 226 aa2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 TEX29Q8N6K0 151 aa2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 SMIM2Q9BVW6 85 aa2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 HHLA3Q9XRX5 114 aa2.59□□□□□ -1.99
HMGB3P18-201ENST00000406327 ABCA4P78363 2273 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 TACC2O95359 2948 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 TRAV2A0A0B4J234 112 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 TRAV12-3A0A0B4J271 114 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 IGKV2-24A0A0C4DH68 120 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 K7EMI3 77 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 IGKCP01834 107 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 CD7P09564 240 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 G0S2P27469 103 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 BVES-AS1Q5T3Y7 98 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 AMTNQ6UX39 209 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 FOXI2Q6ZQN5 318 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 C2orf91Q6ZV80 131 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 WFDC11Q8NEX6 87 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 ZNRF2Q8NHG8 242 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 C4orf3Q8WVX3 66 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 TOMM6Q96B49 74 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 AP1S3Q96PC3 154 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 TP73-AS1Q9UF72 201 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 RELNP78509 3460 aa2.58□□□□□ -2
HMGB3P18-201ENST00000406327 TRAV12-2A0A075B6T6 113 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 A0A087WX48 190 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 TRAV12-1A0A0B4J245 112 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 KNCNA6PVL3 124 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 A8MTW9 85 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 PSCAO43653 123 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 DPM2O94777 84 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 CRYGDP07320 174 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 MGPP08493 103 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 POLR2KP53803 58 aaKnown RBP2.57□□□□□ -2
HMGB3P18-201ENST00000406327 DEFB131AP59861 70 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 SPINK13Q1W4C9 94 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 DEFB136Q30KP8 78 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 TMEM97Q5BJF2 176 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 Q6ZRU5 148 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 OR11H1Q8NG94 326 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 RPL39LQ96EH5 51 aaKnown RBP2.57□□□□□ -2
HMGB3P18-201ENST00000406327 SCGB3A1Q96QR1 104 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 TM2D3Q9BRN9 247 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 R4GN34 69 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 COL6A6A6NMZ7 2263 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 CACNA1AO00555 2505 aa2.57□□□□□ -2
HMGB3P18-201ENST00000406327 PKD1L2Q7Z442 2459 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 PIEZO1Q92508 2521 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 IGKV2D-26A0A0A0MRZ7 120 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 TRBV6-5A0A0K0K1A5 114 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 LINC01549A6NIU2 74 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 F8VRH5 84 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 J3QKU1 62 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 M0QY20 66 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 TAX1BP3O14907 124 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 HLA-DRB4P13762 266 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 PLNP26678 52 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 SEC11AP67812 179 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 HSD52Q0P140 79 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 DEFB114Q30KQ6 69 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 HIGD2AQ9BW72 106 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 MRPL35Q9NZE8 188 aaKnown RBP2.56□□□□□ -2
HMGB3P18-201ENST00000406327 HIGD1BQ9P298 99 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 HLA-DRB4X5D2U9 266 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 ABCA1O95477 2261 aa2.56□□□□□ -2
HMGB3P18-201ENST00000406327 TPRP12270 2363 aaKnown RBP2.56□□□□□ -2
HMGB3P18-201ENST00000406327 SPTBN4Q9H254 2564 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 CHD8Q9HCK8 2581 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 ASH1LQ9NR48 2969 aaKnown RBP2.55□□□□□ -2
HMGB3P18-201ENST00000406327 TRBV25-1A0A075B6N4 114 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 TRBV27A0A0K0K1C4 114 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 NBASA2RRP1 2371 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 SDHAF1A6NFY7 115 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 IGIPA6NJ69 53 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 H3BRM9 83 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 CCL25O15444 150 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 SLC25A20O43772 301 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 IGLV6-57P01721 117 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 FBN2P35556 2912 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 TCTAP57738 103 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 KRTAP10-8P60410 259 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 DOPEY1Q5JWR5 2465 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 HIVEP3Q5T1R4 2406 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 FAM74A4Q5TZK3 123 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 CFAP46Q8IYW2 2715 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 DYNLRB2Q8TF09 96 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 PTH2Q96A98 100 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 TMEM141Q96I45 108 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 LINC00467Q9BRT7 94 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 CST9LQ9H4G1 147 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms