RNA–Protein interactions for RNA: ENST00000405957.6

LSP1-203, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LSP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-203ENST00000405957 RNF183Q96D59 192 aa12.1□□□□□ -0.47
LSP1-203ENST00000405957 LOC100131303A0A0U1RQF7 123 aa12.09□□□□□ -0.47
LSP1-203ENST00000405957 CIRBPQ14011 172 aaKnown RBP12.09□□□□□ -0.47
LSP1-203ENST00000405957 A4D1N5 150 aa12.08□□□□□ -0.48
LSP1-203ENST00000405957 IFITM1P13164 125 aa12.08□□□□□ -0.48
LSP1-203ENST00000405957 MIFP14174 115 aa12.08□□□□□ -0.48
LSP1-203ENST00000405957 MIAQ16674 131 aa12.08□□□□□ -0.48
LSP1-203ENST00000405957 COPS9Q8WXC6 57 aa12.08□□□□□ -0.48
LSP1-203ENST00000405957 LITAFQ99732 161 aa12.08□□□□□ -0.48
LSP1-203ENST00000405957 PRO0255Q9UI72 69 aa12.08□□□□□ -0.48
LSP1-203ENST00000405957 MGAM2Q2M2H8 2515 aa12.08□□□□□ -0.48
LSP1-203ENST00000405957 TRAV13-1A0A0B4J241 112 aa12.07□□□□□ -0.48
LSP1-203ENST00000405957 G3V4G9 280 aa12.07□□□□□ -0.48
LSP1-203ENST00000405957 EGFEM1PQ0D2K5 195 aa12.07□□□□□ -0.48
LSP1-203ENST00000405957 FAM222AQ5U5X8 452 aa12.07□□□□□ -0.48
LSP1-203ENST00000405957 MUSTN1Q8IVN3 82 aa12.07□□□□□ -0.48
LSP1-203ENST00000405957 CBY1Q9Y3M2 126 aa12.07□□□□□ -0.48
LSP1-203ENST00000405957 TRBV20-1A0A075B6N2 111 aa12.07□□□□□ -0.48
LSP1-203ENST00000405957 IGHV4-28A0A0C4DH34 117 aa12.07□□□□□ -0.48
LSP1-203ENST00000405957 SMIM1B2RUZ4 78 aa12.06□□□□□ -0.48
LSP1-203ENST00000405957 COX6A2Q02221 97 aa12.06□□□□□ -0.48
LSP1-203ENST00000405957 Q8NAQ8 132 aa12.06□□□□□ -0.48
LSP1-203ENST00000405957 NBEAL1Q6ZS30 2694 aa12.05□□□□□ -0.48
LSP1-203ENST00000405957 NOTCH1P46531 2555 aa12.05□□□□□ -0.48
LSP1-203ENST00000405957 ATP6V0E2Q8NHE4 81 aa12.05□□□□□ -0.48
LSP1-203ENST00000405957 CHCHD5Q9BSY4 110 aa12.05□□□□□ -0.48
LSP1-203ENST00000405957 KRTAP10-11P60412 298 aa12.05□□□□□ -0.48
LSP1-203ENST00000405957 HERV-K104P63124 156 aa12.05□□□□□ -0.48
LSP1-203ENST00000405957 LOC107984156A0A0G2JMH3 177 aa12.04□□□□□ -0.48
LSP1-203ENST00000405957 A8MZ25 164 aa12.04□□□□□ -0.48
LSP1-203ENST00000405957 H3BMG7 143 aa12.04□□□□□ -0.48
LSP1-203ENST00000405957 RBX1P62877 108 aa12.04□□□□□ -0.48
LSP1-203ENST00000405957 ARL17AQ8IVW1 177 aa12.04□□□□□ -0.48
LSP1-203ENST00000405957 PRSS2P07478 247 aa12.03□□□□□ -0.48
LSP1-203ENST00000405957 GYPEP15421 78 aa12.03□□□□□ -0.48
LSP1-203ENST00000405957 ERG28Q9UKR5 140 aa12.03□□□□□ -0.48
LSP1-203ENST00000405957 F5H768 121 aa12.02□□□□□ -0.48
LSP1-203ENST00000405957 GAGE6Q13070 117 aa12.02□□□□□ -0.48
LSP1-203ENST00000405957 IGHV3-33P01772 117 aa12.02□□□□□ -0.49
LSP1-203ENST00000405957 PPDPFQ9H3Y8 114 aa12.02□□□□□ -0.49
LSP1-203ENST00000405957 Q9H8V8 135 aa12.01□□□□□ -0.49
LSP1-203ENST00000405957 A0A1B0GUV1 79 aa12□□□□□ -0.49
LSP1-203ENST00000405957 DEFB4AO15263 64 aa12□□□□□ -0.49
LSP1-203ENST00000405957 DAD1P61803 113 aa12□□□□□ -0.49
LSP1-203ENST00000405957 ADAMTSL4-AS1Q5T5F5 129 aa12□□□□□ -0.49
LSP1-203ENST00000405957 PAX4O43316 350 aa12□□□□□ -0.49
LSP1-203ENST00000405957 TEX48A0A1B0GUV7 120 aa11.99□□□□□ -0.49
LSP1-203ENST00000405957 SFTA2Q6UW10 78 aa11.99□□□□□ -0.49
LSP1-203ENST00000405957 ZNF625Q96I27 306 aaPredicted RBP11.99□□□□□ -0.49
LSP1-203ENST00000405957 TRAV26-1A0A087WT03 109 aa11.98□□□□□ -0.49
LSP1-203ENST00000405957 J3QR89 54 aa11.98□□□□□ -0.49
LSP1-203ENST00000405957 SPART-AS1P0CW21 52 aa11.98□□□□□ -0.49
LSP1-203ENST00000405957 SCGB1C2P0DMR2 95 aa11.98□□□□□ -0.49
LSP1-203ENST00000405957 PSMB2P49721 201 aa11.98□□□□□ -0.49
LSP1-203ENST00000405957 PRO0461Q9UI25 63 aa11.98□□□□□ -0.49
LSP1-203ENST00000405957 CELA1Q9UNI1 258 aa11.98□□□□□ -0.49
LSP1-203ENST00000405957 DNAH3Q8TD57 4116 aa11.98□□□□□ -0.49
LSP1-203ENST00000405957 IGLV4-60A0A075B6I1 120 aa11.97□□□□□ -0.49
LSP1-203ENST00000405957 ATP5G1P05496 136 aa11.97□□□□□ -0.49
LSP1-203ENST00000405957 SH2D6Q7Z4S9 175 aa11.97□□□□□ -0.49
LSP1-203ENST00000405957 TRBV30A0A0K0K1B3 111 aa11.96□□□□□ -0.49
LSP1-203ENST00000405957 Q1RN00 199 aa11.96□□□□□ -0.49
LSP1-203ENST00000405957 RNF151Q2KHN1 245 aa11.96□□□□□ -0.49
LSP1-203ENST00000405957 EIF4EBP3O60516 100 aaPredicted RBP11.95□□□□□ -0.5
LSP1-203ENST00000405957 WFDC2Q14508 124 aa11.95□□□□□ -0.5
LSP1-203ENST00000405957 VPS25Q9BRG1 176 aa11.95□□□□□ -0.5
LSP1-203ENST00000405957 A0A087WZ39 114 aa11.95□□□□□ -0.5
LSP1-203ENST00000405957 IGHV3OR16-9A0A0B4J2B5 98 aa11.95□□□□□ -0.5
LSP1-203ENST00000405957 MEIG1Q5JSS6 88 aa11.95□□□□□ -0.5
LSP1-203ENST00000405957 KPRPQ5T749 579 aaPredicted RBP11.95□□□□□ -0.5
LSP1-203ENST00000405957 COX7B2Q8TF08 81 aa11.95□□□□□ -0.5
LSP1-203ENST00000405957 TCL1BO95988 128 aa11.94□□□□□ -0.5
LSP1-203ENST00000405957 PRB2P02812 416 aaPredicted RBP11.94□□□□□ -0.5
LSP1-203ENST00000405957 SS18Q15532 418 aa11.94□□□□□ -0.5
LSP1-203ENST00000405957 COX6CP09669 75 aa11.93□□□□□ -0.5
LSP1-203ENST00000405957 LINC01561Q8N1V8 128 aa11.93□□□□□ -0.5
LSP1-203ENST00000405957 LINC00308Q8TCZ7 52 aa11.93□□□□□ -0.5
LSP1-203ENST00000405957 LINC00959A0A1B0GUT2 108 aa11.92□□□□□ -0.5
LSP1-203ENST00000405957 TMEM262E9PQX1 116 aa11.92□□□□□ -0.5
LSP1-203ENST00000405957 M0QXV9 152 aa11.92□□□□□ -0.5
LSP1-203ENST00000405957 NBEAL2Q6ZNJ1 2754 aa11.91□□□□□ -0.5
LSP1-203ENST00000405957 ATXN8Q156A1 80 aa11.91□□□□□ -0.5
LSP1-203ENST00000405957 IGKV3OR2-268A0A0C4DH90 116 aa11.9□□□□□ -0.5
LSP1-203ENST00000405957 H7C2G1 150 aa11.9□□□□□ -0.5
LSP1-203ENST00000405957 MRPL23Q16540 153 aaKnown RBP11.9□□□□□ -0.5
LSP1-203ENST00000405957 ETDBQ3ZM63 59 aa11.9□□□□□ -0.5
LSP1-203ENST00000405957 ICOSQ9Y6W8 199 aa11.9□□□□□ -0.5
LSP1-203ENST00000405957 C11orf68Q9H3H3 251 aaKnown RBP11.9□□□□□ -0.51
LSP1-203ENST00000405957 RETNQ9HD89 108 aa11.9□□□□□ -0.51
LSP1-203ENST00000405957 NPC2P61916 151 aa11.89□□□□□ -0.51
LSP1-203ENST00000405957 DAND5Q8N907 189 aa11.88□□□□□ -0.51
LSP1-203ENST00000405957 TRIAP1O43715 76 aa11.87□□□□□ -0.51
LSP1-203ENST00000405957 IBA57-AS1B1ANH7 110 aa11.87□□□□□ -0.51
LSP1-203ENST00000405957 K7EIL1 84 aa11.87□□□□□ -0.51
LSP1-203ENST00000405957 RPL13AP40429 203 aaKnown RBP11.87□□□□□ -0.51
LSP1-203ENST00000405957 A0A096LPF7 62 aa11.86□□□□□ -0.51
LSP1-203ENST00000405957 HTN3P15516 51 aa11.86□□□□□ -0.51
LSP1-203ENST00000405957 TOMM7Q9P0U1 55 aa11.86□□□□□ -0.51
LSP1-203ENST00000405957 SMCPP49901 116 aaPredicted RBP11.85□□□□□ -0.51
LSP1-203ENST00000405957 LELP1Q5T871 98 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms