RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 LY6EQ16553 131 aa10.26□□□□□ -0.77
DUSP28-202ENST00000405954 IGFL2Q6UWQ7 119 aa10.26□□□□□ -0.77
DUSP28-202ENST00000405954 SS18Q15532 418 aa10.26□□□□□ -0.77
DUSP28-202ENST00000405954 RETNQ9HD89 108 aa10.25□□□□□ -0.77
DUSP28-202ENST00000405954 HIVEP3Q5T1R4 2406 aa10.25□□□□□ -0.77
DUSP28-202ENST00000405954 U3KQE9 123 aa10.25□□□□□ -0.77
DUSP28-202ENST00000405954 IL17DQ8TAD2 202 aa10.24□□□□□ -0.77
DUSP28-202ENST00000405954 LINC00467Q9BRT7 94 aa10.24□□□□□ -0.77
DUSP28-202ENST00000405954 POLQO75417 2590 aa10.24□□□□□ -0.77
DUSP28-202ENST00000405954 Q8N9W7 124 aa10.23□□□□□ -0.77
DUSP28-202ENST00000405954 SMIM11BQ8TCY0 68 aa10.23□□□□□ -0.77
DUSP28-202ENST00000405954 TRBV7-6A0A0J9YX20 115 aa10.23□□□□□ -0.77
DUSP28-202ENST00000405954 DAD1P61803 113 aa10.23□□□□□ -0.77
DUSP28-202ENST00000405954 C9orf129Q5T035 196 aaKnown RBP10.23□□□□□ -0.77
DUSP28-202ENST00000405954 ITLN2Q8WWU7 325 aaPredicted RBP10.23□□□□□ -0.77
DUSP28-202ENST00000405954 LY6LH3BQJ8 138 aa10.22□□□□□ -0.77
DUSP28-202ENST00000405954 BLCAPP62952 87 aa10.22□□□□□ -0.77
DUSP28-202ENST00000405954 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.21□□□□□ -0.77
DUSP28-202ENST00000405954 PRB2P02812 416 aaPredicted RBP10.21□□□□□ -0.77
DUSP28-202ENST00000405954 CDSNQ15517 529 aa10.21□□□□□ -0.78
DUSP28-202ENST00000405954 SCXQ7RTU7 201 aa10.2□□□□□ -0.78
DUSP28-202ENST00000405954 ZANQ9Y493 2812 aa10.2□□□□□ -0.78
DUSP28-202ENST00000405954 SETD2Q9BYW2 2564 aaPredicted RBP10.2□□□□□ -0.78
DUSP28-202ENST00000405954 IGHV3-53P01767 116 aa10.2□□□□□ -0.78
DUSP28-202ENST00000405954 NOTCH2Q04721 2471 aa10.19□□□□□ -0.78
DUSP28-202ENST00000405954 LRCOL1A6NCL2 159 aa10.19□□□□□ -0.78
DUSP28-202ENST00000405954 TRAV7A0A075B6U4 112 aa10.19□□□□□ -0.78
DUSP28-202ENST00000405954 JMJD7-PLA2G4BH0Y9G9 81 aa10.19□□□□□ -0.78
DUSP28-202ENST00000405954 COX6A2Q02221 97 aa10.19□□□□□ -0.78
DUSP28-202ENST00000405954 ATP5EP2Q5VTU8 51 aa10.19□□□□□ -0.78
DUSP28-202ENST00000405954 PF4P02776 101 aa10.18□□□□□ -0.78
DUSP28-202ENST00000405954 SAA4P35542 130 aa10.18□□□□□ -0.78
DUSP28-202ENST00000405954 NDUFA4O00483 81 aa10.17□□□□□ -0.78
DUSP28-202ENST00000405954 CCKP06307 115 aa10.17□□□□□ -0.78
DUSP28-202ENST00000405954 USP9YO00507 2555 aaPredicted RBP10.17□□□□□ -0.78
DUSP28-202ENST00000405954 SONP18583 2426 aaKnown RBP10.17□□□□□ -0.78
DUSP28-202ENST00000405954 PRM2P04554 102 aa10.17□□□□□ -0.78
DUSP28-202ENST00000405954 Q8NA96 180 aa10.17□□□□□ -0.78
DUSP28-202ENST00000405954 LINC00337Q8N6G1 96 aa10.16□□□□□ -0.78
DUSP28-202ENST00000405954 C6orf226Q5I0X4 101 aa10.16□□□□□ -0.78
DUSP28-202ENST00000405954 FLNCQ14315 2725 aa10.16□□□□□ -0.78
DUSP28-202ENST00000405954 H7BZZ5 65 aa10.16□□□□□ -0.78
DUSP28-202ENST00000405954 COX7B2Q8TF08 81 aa10.16□□□□□ -0.78
DUSP28-202ENST00000405954 TLN2Q9Y4G6 2542 aa10.15□□□□□ -0.78
DUSP28-202ENST00000405954 MINOS1-NBL1R4GNA1 71 aa10.15□□□□□ -0.78
DUSP28-202ENST00000405954 LRRK2Q5S007 2527 aa10.15□□□□□ -0.79
DUSP28-202ENST00000405954 PMAIP1Q13794 54 aa10.15□□□□□ -0.79
DUSP28-202ENST00000405954 MYO9AB2RTY4 2548 aa10.14□□□□□ -0.79
DUSP28-202ENST00000405954 SIRPDQ9H106 197 aa10.14□□□□□ -0.79
DUSP28-202ENST00000405954 Q9UF83 564 aa10.14□□□□□ -0.79
DUSP28-202ENST00000405954 PTPN13Q12923 2485 aa10.14□□□□□ -0.79
DUSP28-202ENST00000405954 LINC00482Q8N8I6 264 aa10.14□□□□□ -0.79
DUSP28-202ENST00000405954 KLLNB2CW77 178 aa10.13□□□□□ -0.79
DUSP28-202ENST00000405954 BPESC1Q9GZL8 116 aa10.13□□□□□ -0.79
DUSP28-202ENST00000405954 ITPR1Q14643 2758 aa10.13□□□□□ -0.79
DUSP28-202ENST00000405954 Q6ZTI0 123 aa10.13□□□□□ -0.79
DUSP28-202ENST00000405954 ZNF462Q96JM2 2506 aa10.13□□□□□ -0.79
DUSP28-202ENST00000405954 A0A087WZ39 114 aa10.13□□□□□ -0.79
DUSP28-202ENST00000405954 MIFP14174 115 aa10.13□□□□□ -0.79
DUSP28-202ENST00000405954 A0A1W2PRX2 142 aa10.12□□□□□ -0.79
DUSP28-202ENST00000405954 K7ENP7 123 aa10.12□□□□□ -0.79
DUSP28-202ENST00000405954 FASNP49327 2511 aaKnown RBP10.12□□□□□ -0.79
DUSP28-202ENST00000405954 LINC00242Q5T6M2 205 aa10.12□□□□□ -0.79
DUSP28-202ENST00000405954 TMEM256-PLSCR3K7ERE1 68 aa10.12□□□□□ -0.79
DUSP28-202ENST00000405954 SMIM1B2RUZ4 78 aa10.11□□□□□ -0.79
DUSP28-202ENST00000405954 BEAN1Q3B7T3 259 aa10.11□□□□□ -0.79
DUSP28-202ENST00000405954 BRD3OSQ6XYD6 125 aa10.11□□□□□ -0.79
DUSP28-202ENST00000405954 FP248Q71RG6 208 aaPredicted RBP10.11□□□□□ -0.79
DUSP28-202ENST00000405954 TRGV1A0A0A0MS02 117 aa10.1□□□□□ -0.79
DUSP28-202ENST00000405954 IGFL3Q6UXB1 125 aa10.1□□□□□ -0.79
DUSP28-202ENST00000405954 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.1□□□□□ -0.79
DUSP28-202ENST00000405954 FUSP35637 526 aaKnown RBP eCLIP10.09□□□□□ -0.79
DUSP28-202ENST00000405954 MRPL55Q7Z7F7 128 aaKnown RBP10.09□□□□□ -0.79
DUSP28-202ENST00000405954 TRAV10A0A0B4J240 114 aa10.09□□□□□ -0.79
DUSP28-202ENST00000405954 Q8N3U1 123 aa10.09□□□□□ -0.79
DUSP28-202ENST00000405954 NDUFC1O43677 76 aa10.09□□□□□ -0.79
DUSP28-202ENST00000405954 CHCHD7Q9BUK0 85 aa10.09□□□□□ -0.79
DUSP28-202ENST00000405954 CCL18P55774 89 aa10.08□□□□□ -0.8
DUSP28-202ENST00000405954 ODF3BA8MYP8 253 aa10.06□□□□□ -0.8
DUSP28-202ENST00000405954 DEFB131AP59861 70 aa10.06□□□□□ -0.8
DUSP28-202ENST00000405954 DYNLRB2Q8TF09 96 aa10.06□□□□□ -0.8
DUSP28-202ENST00000405954 C22orf24Q9Y442 160 aa10.06□□□□□ -0.8
DUSP28-202ENST00000405954 USP24Q9UPU5 2620 aa10.06□□□□□ -0.8
DUSP28-202ENST00000405954 USP9XQ93008 2570 aaPredicted RBP10.06□□□□□ -0.8
DUSP28-202ENST00000405954 PSPHP1O15172 72 aa10.05□□□□□ -0.8
DUSP28-202ENST00000405954 ZFP36P26651 326 aaKnown RBP10.05□□□□□ -0.8
DUSP28-202ENST00000405954 CFHR3Q02985 330 aa10.05□□□□□ -0.8
DUSP28-202ENST00000405954 LYPD5Q6UWN5 251 aa10.05□□□□□ -0.8
DUSP28-202ENST00000405954 USMG5Q96IX5 58 aa10.05□□□□□ -0.8
DUSP28-202ENST00000405954 Q8N6K4 173 aa10.05□□□□□ -0.8
DUSP28-202ENST00000405954 IGSF10Q6WRI0 2623 aa10.05□□□□□ -0.8
DUSP28-202ENST00000405954 CCDC168Q8NDH2 2452 aa10.04□□□□□ -0.8
DUSP28-202ENST00000405954 TRBV10-1A0A0K0K1A3 114 aa10.04□□□□□ -0.8
DUSP28-202ENST00000405954 ATP5EP56381 51 aaPredicted RBP10.04□□□□□ -0.8
DUSP28-202ENST00000405954 Q6ZSN1 163 aa10.04□□□□□ -0.8
DUSP28-202ENST00000405954 CFAP46Q8IYW2 2715 aa10.04□□□□□ -0.8
DUSP28-202ENST00000405954 UBE2E2Q96LR5 201 aa10.03□□□□□ -0.8
DUSP28-202ENST00000405954 TM2D3Q9BRN9 247 aa10.03□□□□□ -0.8
DUSP28-202ENST00000405954 NREPQ16612 68 aa10.03□□□□□ -0.8
DUSP28-202ENST00000405954 GNLYP22749 145 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms