RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SIVA1O15304 175 aa14.35□□□□□ -0.11
TPM1-208ENST00000404484 CDKN2A-AS1Q9UH64 79 aa14.35□□□□□ -0.11
TPM1-208ENST00000404484 LINC00959A0A1B0GUT2 108 aa14.34□□□□□ -0.11
TPM1-208ENST00000404484 IGLL5B9A064 214 aa14.34□□□□□ -0.11
TPM1-208ENST00000404484 NUPR2A6NF83 97 aa14.34□□□□□ -0.11
TPM1-208ENST00000404484 COX6A2Q02221 97 aa14.34□□□□□ -0.11
TPM1-208ENST00000404484 IGHV1-58A0A0C4DH39 117 aa14.33□□□□□ -0.12
TPM1-208ENST00000404484 J3QQQ9 107 aa14.33□□□□□ -0.12
TPM1-208ENST00000404484 LGALS3P17931 250 aaKnown RBP14.33□□□□□ -0.12
TPM1-208ENST00000404484 LINC00269Q8N2A0 174 aa14.33□□□□□ -0.12
TPM1-208ENST00000404484 MYMXA0A1B0GTQ4 84 aa14.32□□□□□ -0.12
TPM1-208ENST00000404484 LCE6AA0A183 80 aa14.31□□□□□ -0.12
TPM1-208ENST00000404484 CCL18P55774 89 aa14.31□□□□□ -0.12
TPM1-208ENST00000404484 REG3AQ06141 175 aa14.31□□□□□ -0.12
TPM1-208ENST00000404484 SPINK8P0C7L1 97 aa14.3□□□□□ -0.12
TPM1-208ENST00000404484 CTAG1AP78358 180 aa14.3□□□□□ -0.12
TPM1-208ENST00000404484 WFDC10BQ8IUB3 73 aa14.3□□□□□ -0.12
TPM1-208ENST00000404484 TP73-AS1Q9UF72 201 aa14.3□□□□□ -0.12
TPM1-208ENST00000404484 RYR2Q92736 4967 aa14.3□□□□□ -0.12
TPM1-208ENST00000404484 ZNF815PA8K554 130 aa14.3□□□□□ -0.12
TPM1-208ENST00000404484 IGHV3-30-3P0DP02 117 aa14.3□□□□□ -0.12
TPM1-208ENST00000404484 TTTY13Q9BZ97 58 aa14.3□□□□□ -0.12
TPM1-208ENST00000404484 HIGD1BQ9P298 99 aa14.3□□□□□ -0.12
TPM1-208ENST00000404484 KLK5Q9Y337 293 aaPredicted RBP14.3□□□□□ -0.12
TPM1-208ENST00000404484 IGHV3-64A0A075B6Q5 118 aa14.29□□□□□ -0.12
TPM1-208ENST00000404484 CLPSL2Q6UWE3 100 aa14.29□□□□□ -0.12
TPM1-208ENST00000404484 C2orf91Q6ZV80 131 aa14.29□□□□□ -0.12
TPM1-208ENST00000404484 Q8N3U1 123 aa14.29□□□□□ -0.12
TPM1-208ENST00000404484 MAPKAPK5-AS1Q8N8E1 139 aa14.29□□□□□ -0.12
TPM1-208ENST00000404484 LINC01556Q5JQF7 62 aa14.28□□□□□ -0.12
TPM1-208ENST00000404484 PRR34Q9NV39 138 aa14.28□□□□□ -0.12
TPM1-208ENST00000404484 TRAV8-3A0A0A6YYJ7 113 aa14.27□□□□□ -0.12
TPM1-208ENST00000404484 IGHV3OR16-9A0A0B4J2B5 98 aa14.27□□□□□ -0.12
TPM1-208ENST00000404484 IGHV3-30P01768 117 aa14.27□□□□□ -0.12
TPM1-208ENST00000404484 IGHV3-33P01772 117 aa14.27□□□□□ -0.12
TPM1-208ENST00000404484 CRPP02741 224 aa14.27□□□□□ -0.12
TPM1-208ENST00000404484 IGHV3-30-5P0DP03 117 aa14.27□□□□□ -0.12
TPM1-208ENST00000404484 TSPEAR-AS2P59090 65 aa14.27□□□□□ -0.12
TPM1-208ENST00000404484 KLK12Q9UKR0 248 aa14.27□□□□□ -0.12
TPM1-208ENST00000404484 IGLV5-39A0A0G2JS06 123 aa14.26□□□□□ -0.13
TPM1-208ENST00000404484 SMIM1B2RUZ4 78 aa14.26□□□□□ -0.13
TPM1-208ENST00000404484 DNAH1Q9P2D7 4330 aa14.26□□□□□ -0.13
TPM1-208ENST00000404484 LINC01561Q8N1V8 128 aa14.26□□□□□ -0.13
TPM1-208ENST00000404484 A0A087WZ39 114 aa14.25□□□□□ -0.13
TPM1-208ENST00000404484 M0R143 59 aa14.25□□□□□ -0.13
TPM1-208ENST00000404484 XCL1P47992 114 aa14.25□□□□□ -0.13
TPM1-208ENST00000404484 CD164L2Q6UWJ8 174 aa14.25□□□□□ -0.13
TPM1-208ENST00000404484 SCGB1D4Q6XE38 83 aa14.25□□□□□ -0.13
TPM1-208ENST00000404484 HYDINQ4G0P3 5121 aa14.24□□□□□ -0.13
TPM1-208ENST00000404484 TRAV8-4A0A0B4J246 113 aa14.24□□□□□ -0.13
TPM1-208ENST00000404484 DNAH10OSP0CZ25 163 aa14.24□□□□□ -0.13
TPM1-208ENST00000404484 CHCHD10Q8WYQ3 142 aaPredicted RBP14.24□□□□□ -0.13
TPM1-208ENST00000404484 LINC00588Q9Y4M8 146 aa14.24□□□□□ -0.13
TPM1-208ENST00000404484 UPK3BQ9BT76 320 aa14.23□□□□□ -0.13
TPM1-208ENST00000404484 ALMS1Q8TCU4 4167 aa14.23□□□□□ -0.13
TPM1-208ENST00000404484 MIAQ16674 131 aa14.22□□□□□ -0.13
TPM1-208ENST00000404484 HSD52Q0P140 79 aa14.22□□□□□ -0.13
TPM1-208ENST00000404484 UBE2WQ96B02 151 aa14.22□□□□□ -0.13
TPM1-208ENST00000404484 NDUFA12Q9UI09 145 aa14.22□□□□□ -0.13
TPM1-208ENST00000404484 ENHOQ6UWT2 76 aa14.21□□□□□ -0.14
TPM1-208ENST00000404484 COX7A2LO14548 114 aa14.2□□□□□ -0.14
TPM1-208ENST00000404484 C5orf38Q86SI9 138 aa14.2□□□□□ -0.14
TPM1-208ENST00000404484 LINC00476Q8WZB0 136 aa14.2□□□□□ -0.14
TPM1-208ENST00000404484 APLNQ9ULZ1 77 aa14.2□□□□□ -0.14
TPM1-208ENST00000404484 IGLV10-54A0A075B6I4 117 aa14.18□□□□□ -0.14
TPM1-208ENST00000404484 NDUFA1O15239 70 aa14.18□□□□□ -0.14
TPM1-208ENST00000404484 TAL2Q16559 108 aa14.18□□□□□ -0.14
TPM1-208ENST00000404484 SNHG12Q9BXW3 62 aa14.18□□□□□ -0.14
TPM1-208ENST00000404484 LY6G6CO95867 125 aa14.17□□□□□ -0.14
TPM1-208ENST00000404484 HINT1P49773 126 aaPredicted RBP14.17□□□□□ -0.14
TPM1-208ENST00000404484 LBHQ53QV2 105 aaPredicted RBP14.17□□□□□ -0.14
TPM1-208ENST00000404484 COX7B2Q8TF08 81 aa14.17□□□□□ -0.14
TPM1-208ENST00000404484 KMT2AQ03164 3969 aa14.16□□□□□ -0.14
TPM1-208ENST00000404484 SFTA2Q6UW10 78 aa14.16□□□□□ -0.14
TPM1-208ENST00000404484 C10orf126Q8N4M7 172 aa14.16□□□□□ -0.14
TPM1-208ENST00000404484 GAGE12HA6NDE8 117 aa14.15□□□□□ -0.14
TPM1-208ENST00000404484 EREGO14944 169 aa14.15□□□□□ -0.14
TPM1-208ENST00000404484 MALP21145 153 aa14.15□□□□□ -0.14
TPM1-208ENST00000404484 FOXI1Q12951 378 aa14.15□□□□□ -0.14
TPM1-208ENST00000404484 BATFQ16520 125 aa14.15□□□□□ -0.14
TPM1-208ENST00000404484 HIST1H4GQ99525 98 aa14.15□□□□□ -0.14
TPM1-208ENST00000404484 A0A0J9YXY3 114 aa14.14□□□□□ -0.15
TPM1-208ENST00000404484 K7EP13 123 aa14.14□□□□□ -0.15
TPM1-208ENST00000404484 HERV-K104P63124 156 aa14.14□□□□□ -0.15
TPM1-208ENST00000404484 BVES-AS1Q5T3Y7 98 aa14.14□□□□□ -0.15
TPM1-208ENST00000404484 UBE2DNLQ8IWF7 75 aa14.14□□□□□ -0.15
TPM1-208ENST00000404484 SPANXB1Q9NS25 103 aaPredicted RBP14.14□□□□□ -0.15
TPM1-208ENST00000404484 TMEM238C9JI98 176 aa14.13□□□□□ -0.15
TPM1-208ENST00000404484 APOMO95445 188 aa14.13□□□□□ -0.15
TPM1-208ENST00000404484 Q9H8V8 135 aa14.13□□□□□ -0.15
TPM1-208ENST00000404484 TOMM7Q9P0U1 55 aa14.13□□□□□ -0.15
TPM1-208ENST00000404484 PRSS2P07478 247 aa14.13□□□□□ -0.15
TPM1-208ENST00000404484 C1orf43Q9BWL3 253 aa14.13□□□□□ -0.15
TPM1-208ENST00000404484 SRSF9Q13242 221 aaKnown RBP eCLIP14.12□□□□□ -0.15
TPM1-208ENST00000404484 Q8IZM0 81 aa14.12□□□□□ -0.15
TPM1-208ENST00000404484 ZNF625Q96I27 306 aaPredicted RBP14.12□□□□□ -0.15
TPM1-208ENST00000404484 VPS13DQ5THJ4 4388 aa14.11□□□□□ -0.15
TPM1-208ENST00000404484 IBA57-AS1B1ANH7 110 aa14.11□□□□□ -0.15
TPM1-208ENST00000404484 TIMM17BO60830 172 aa14.11□□□□□ -0.15
TPM1-208ENST00000404484 CIRBPQ14011 172 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms