RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ZNF462Q96JM2 2506 aa6.84□□□□□ -1.31
SMC1B-202ENST00000404354 FAM240AA0A1B0GVK7 77 aa6.84□□□□□ -1.31
SMC1B-202ENST00000404354 NCR3O14931 201 aa6.84□□□□□ -1.31
SMC1B-202ENST00000404354 DNAL4O96015 105 aa6.84□□□□□ -1.31
SMC1B-202ENST00000404354 CFAP161Q6P656 301 aa6.84□□□□□ -1.31
SMC1B-202ENST00000404354 APCP25054 2843 aa6.84□□□□□ -1.31
SMC1B-202ENST00000404354 C5orf38Q86SI9 138 aa6.84□□□□□ -1.31
SMC1B-202ENST00000404354 LINC00643Q86TS7 51 aa6.84□□□□□ -1.31
SMC1B-202ENST00000404354 C22orf24Q9Y442 160 aa6.84□□□□□ -1.31
SMC1B-202ENST00000404354 B4DSR2 109 aa6.83□□□□□ -1.32
SMC1B-202ENST00000404354 WFDC9Q8NEX5 89 aa6.83□□□□□ -1.32
SMC1B-202ENST00000404354 CRPP02741 224 aa6.83□□□□□ -1.32
SMC1B-202ENST00000404354 C3orf22Q8N5N4 141 aa6.83□□□□□ -1.32
SMC1B-202ENST00000404354 C11orf72Q8NBR9 251 aa6.83□□□□□ -1.32
SMC1B-202ENST00000404354 MAP6D1Q9H9H5 199 aa6.83□□□□□ -1.32
SMC1B-202ENST00000404354 SND1-IT1Q9HBX3 110 aa6.83□□□□□ -1.32
SMC1B-202ENST00000404354 NOP10Q9NPE3 64 aaKnown RBP6.83□□□□□ -1.32
SMC1B-202ENST00000404354 UBE2L6O14933 153 aa6.83□□□□□ -1.32
SMC1B-202ENST00000404354 UCNP55089 124 aa6.83□□□□□ -1.32
SMC1B-202ENST00000404354 DEFB121Q5J5C9 76 aa6.83□□□□□ -1.32
SMC1B-202ENST00000404354 LECT2O14960 151 aa6.82□□□□□ -1.32
SMC1B-202ENST00000404354 PAX4O43316 350 aa6.82□□□□□ -1.32
SMC1B-202ENST00000404354 MALP21145 153 aa6.82□□□□□ -1.32
SMC1B-202ENST00000404354 CLPSL2Q6UWE3 100 aa6.82□□□□□ -1.32
SMC1B-202ENST00000404354 WFDC10AQ9H1F0 79 aa6.82□□□□□ -1.32
SMC1B-202ENST00000404354 IGSF10Q6WRI0 2623 aa6.82□□□□□ -1.32
SMC1B-202ENST00000404354 HIST1H4AP62805 103 aaKnown RBP6.82□□□□□ -1.32
SMC1B-202ENST00000404354 RPL36AP83881 106 aaKnown RBP6.82□□□□□ -1.32
SMC1B-202ENST00000404354 RPL36ALQ969Q0 106 aaKnown RBP6.82□□□□□ -1.32
SMC1B-202ENST00000404354 TMEM89A2RUT3 159 aa6.81□□□□□ -1.32
SMC1B-202ENST00000404354 PRR3P79522 188 aaKnown RBP6.81□□□□□ -1.32
SMC1B-202ENST00000404354 SMIM11BQ8TCY0 68 aa6.81□□□□□ -1.32
SMC1B-202ENST00000404354 IGLV5-39A0A0G2JS06 123 aa6.81□□□□□ -1.32
SMC1B-202ENST00000404354 TIMM17BO60830 172 aa6.81□□□□□ -1.32
SMC1B-202ENST00000404354 INSP01308 110 aa6.81□□□□□ -1.32
SMC1B-202ENST00000404354 HIST2H2BCQ6DN03 193 aa6.81□□□□□ -1.32
SMC1B-202ENST00000404354 TRGV2A0A075B6R0 118 aa6.81□□□□□ -1.32
SMC1B-202ENST00000404354 A0A1B0GX51 115 aa6.81□□□□□ -1.32
SMC1B-202ENST00000404354 BEAN1Q3B7T3 259 aa6.81□□□□□ -1.32
SMC1B-202ENST00000404354 STHQ8IWL8 128 aa6.8□□□□□ -1.32
SMC1B-202ENST00000404354 KIR2DL5BQ8NHK3 375 aa6.8□□□□□ -1.32
SMC1B-202ENST00000404354 NBPF19A0A087WUL8 3843 aa6.8□□□□□ -1.32
SMC1B-202ENST00000404354 IGKV2-28A0A075B6P5 120 aa6.8□□□□□ -1.32
SMC1B-202ENST00000404354 IGKV2D-28P01615 120 aa6.8□□□□□ -1.32
SMC1B-202ENST00000404354 RPL35AP18077 110 aaKnown RBP6.8□□□□□ -1.32
SMC1B-202ENST00000404354 LINC01600Q96MT4 127 aa6.8□□□□□ -1.32
SMC1B-202ENST00000404354 CDC42SE2Q9NRR3 84 aa6.8□□□□□ -1.32
SMC1B-202ENST00000404354 LINC00846Q9NV44 126 aa6.8□□□□□ -1.32
SMC1B-202ENST00000404354 A0A096LPF7 62 aa6.8□□□□□ -1.32
SMC1B-202ENST00000404354 ACYP1P07311 99 aa6.8□□□□□ -1.32
SMC1B-202ENST00000404354 IGLV5-45A0A087WSX0 123 aa6.79□□□□□ -1.32
SMC1B-202ENST00000404354 UQCRQO14949 82 aa6.79□□□□□ -1.32
SMC1B-202ENST00000404354 C1orf158Q8N1D5 194 aa6.79□□□□□ -1.32
SMC1B-202ENST00000404354 TMEM126AQ9H061 195 aa6.79□□□□□ -1.32
SMC1B-202ENST00000404354 ZNF702PQ9H963 129 aa6.79□□□□□ -1.32
SMC1B-202ENST00000404354 PEMTQ9UBM1 199 aa6.79□□□□□ -1.32
SMC1B-202ENST00000404354 IGLV4-60A0A075B6I1 120 aa6.79□□□□□ -1.32
SMC1B-202ENST00000404354 F5H768 121 aa6.79□□□□□ -1.32
SMC1B-202ENST00000404354 TRACP01848 142 aa6.79□□□□□ -1.32
SMC1B-202ENST00000404354 CCL18P55774 89 aa6.78□□□□□ -1.32
SMC1B-202ENST00000404354 ZNF469Q96JG9 3925 aaPredicted RBP6.78□□□□□ -1.32
SMC1B-202ENST00000404354 HILS1P60008 231 aa6.78□□□□□ -1.32
SMC1B-202ENST00000404354 NOTCH2Q04721 2471 aa6.77□□□□□ -1.32
SMC1B-202ENST00000404354 K7EQD1 137 aa6.77□□□□□ -1.32
SMC1B-202ENST00000404354 ODF3L2Q3SX64 289 aa6.77□□□□□ -1.32
SMC1B-202ENST00000404354 COX7B2Q8TF08 81 aa6.77□□□□□ -1.32
SMC1B-202ENST00000404354 DSCR8Q96T75 97 aa6.77□□□□□ -1.32
SMC1B-202ENST00000404354 INAFM2P0DMQ5 153 aa6.77□□□□□ -1.33
SMC1B-202ENST00000404354 DNAJC30Q96LL9 226 aa6.77□□□□□ -1.33
SMC1B-202ENST00000404354 COX7CP15954 63 aa6.77□□□□□ -1.33
SMC1B-202ENST00000404354 TMEM243Q9BU79 118 aa6.77□□□□□ -1.33
SMC1B-202ENST00000404354 XCL1P47992 114 aa6.76□□□□□ -1.33
SMC1B-202ENST00000404354 DEFB114Q30KQ6 69 aa6.76□□□□□ -1.33
SMC1B-202ENST00000404354 FAM19A5Q7Z5A7 132 aaPredicted RBP6.76□□□□□ -1.33
SMC1B-202ENST00000404354 LINC00526Q96FQ7 95 aa6.76□□□□□ -1.33
SMC1B-202ENST00000404354 FLNAP21333 2647 aaKnown RBP6.76□□□□□ -1.33
SMC1B-202ENST00000404354 CXCL5P42830 114 aa6.76□□□□□ -1.33
SMC1B-202ENST00000404354 IMUPQ9GZP8 106 aa6.76□□□□□ -1.33
SMC1B-202ENST00000404354 TRAV13-2A0A0B4J235 113 aa6.76□□□□□ -1.33
SMC1B-202ENST00000404354 TRGV4A0A0C4DH28 118 aa6.76□□□□□ -1.33
SMC1B-202ENST00000404354 DEFB130BP0DP73 79 aa6.75□□□□□ -1.33
SMC1B-202ENST00000404354 DEFB130AP0DP74 79 aa6.75□□□□□ -1.33
SMC1B-202ENST00000404354 C6orf226Q5I0X4 101 aa6.75□□□□□ -1.33
SMC1B-202ENST00000404354 RNF152Q8N8N0 203 aa6.75□□□□□ -1.33
SMC1B-202ENST00000404354 TRAV23DV6A0A075B6W5 121 aa6.75□□□□□ -1.33
SMC1B-202ENST00000404354 LINC01356Q8N9X3 169 aa6.75□□□□□ -1.33
SMC1B-202ENST00000404354 CSDC2Q9Y534 153 aaKnown RBP6.75□□□□□ -1.33
SMC1B-202ENST00000404354 RPL28P46779 137 aaKnown RBP6.74□□□□□ -1.33
SMC1B-202ENST00000404354 LRRC75A-AS1Q8N1F1 130 aa6.74□□□□□ -1.33
SMC1B-202ENST00000404354 COPS9Q8WXC6 57 aa6.74□□□□□ -1.33
SMC1B-202ENST00000404354 C2orf48Q96LS8 159 aa6.74□□□□□ -1.33
SMC1B-202ENST00000404354 A8MTW9 85 aa6.74□□□□□ -1.33
SMC1B-202ENST00000404354 IGLV10-54A0A075B6I4 117 aa6.73□□□□□ -1.33
SMC1B-202ENST00000404354 ESM1Q9NQ30 184 aa6.73□□□□□ -1.33
SMC1B-202ENST00000404354 ITPR3Q14573 2671 aa6.73□□□□□ -1.33
SMC1B-202ENST00000404354 FAM19A1Q7Z5A9 133 aa6.72□□□□□ -1.33
SMC1B-202ENST00000404354 LINC01561Q8N1V8 128 aa6.72□□□□□ -1.33
SMC1B-202ENST00000404354 USP17L23D6RBM5 183 aa6.72□□□□□ -1.33
SMC1B-202ENST00000404354 RPL18AQ02543 176 aaKnown RBP6.72□□□□□ -1.33
SMC1B-202ENST00000404354 C9orf116Q5BN46 136 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms