RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 K7EQD1 137 aa5.56□□□□□ -1.52
HDAC9-201ENST00000401921 PLA2G2AP14555 144 aa5.56□□□□□ -1.52
HDAC9-201ENST00000401921 MRPS36P82909 103 aaKnown RBP5.56□□□□□ -1.52
HDAC9-201ENST00000401921 VSIG2Q96IQ7 327 aa5.56□□□□□ -1.52
HDAC9-201ENST00000401921 C11orf68Q9H3H3 251 aaKnown RBP5.56□□□□□ -1.52
HDAC9-201ENST00000401921 ESM1Q9NQ30 184 aa5.56□□□□□ -1.52
HDAC9-201ENST00000401921 TINCRA0A1B0GVN0 87 aa5.55□□□□□ -1.52
HDAC9-201ENST00000401921 UQCRQO14949 82 aa5.55□□□□□ -1.52
HDAC9-201ENST00000401921 RPL13AP40429 203 aaKnown RBP5.55□□□□□ -1.52
HDAC9-201ENST00000401921 A0A096LPF7 62 aa5.55□□□□□ -1.52
HDAC9-201ENST00000401921 A0A1B0GX51 115 aa5.55□□□□□ -1.52
HDAC9-201ENST00000401921 RS1O15537 224 aa5.55□□□□□ -1.52
HDAC9-201ENST00000401921 ADAMTSL4-AS1Q5T5F5 129 aa5.55□□□□□ -1.52
HDAC9-201ENST00000401921 C2orf82Q6UX34 121 aa5.55□□□□□ -1.52
HDAC9-201ENST00000401921 C11orf72Q8NBR9 251 aa5.55□□□□□ -1.52
HDAC9-201ENST00000401921 LINC01006Q8NI28 216 aa5.55□□□□□ -1.52
HDAC9-201ENST00000401921 AMELXQ99217 191 aa5.55□□□□□ -1.52
HDAC9-201ENST00000401921 TMEM243Q9BU79 118 aa5.55□□□□□ -1.52
HDAC9-201ENST00000401921 ITPR2Q14571 2701 aa5.55□□□□□ -1.52
HDAC9-201ENST00000401921 NBEAL2Q6ZNJ1 2754 aa5.55□□□□□ -1.52
HDAC9-201ENST00000401921 LOC100131303A0A0U1RQF7 123 aa5.54□□□□□ -1.52
HDAC9-201ENST00000401921 HRCT1Q6UXD1 115 aa5.54□□□□□ -1.52
HDAC9-201ENST00000401921 TMEM263Q8WUH6 116 aaKnown RBP5.54□□□□□ -1.52
HDAC9-201ENST00000401921 CLEC2BQ92478 149 aa5.54□□□□□ -1.52
HDAC9-201ENST00000401921 COX6A2Q02221 97 aa5.54□□□□□ -1.52
HDAC9-201ENST00000401921 LINC01620Q4KN68 170 aa5.53□□□□□ -1.52
HDAC9-201ENST00000401921 Q8N2B8 174 aa5.53□□□□□ -1.52
HDAC9-201ENST00000401921 TMEM86BQ8N661 226 aa5.53□□□□□ -1.52
HDAC9-201ENST00000401921 A0A0B4J2C4 111 aa5.53□□□□□ -1.52
HDAC9-201ENST00000401921 TRIAP1O43715 76 aa5.53□□□□□ -1.52
HDAC9-201ENST00000401921 LINC00158P58513 81 aa5.53□□□□□ -1.52
HDAC9-201ENST00000401921 MRAPQ8TCY5 172 aa5.53□□□□□ -1.52
HDAC9-201ENST00000401921 ICOSQ9Y6W8 199 aa5.53□□□□□ -1.52
HDAC9-201ENST00000401921 MIAQ16674 131 aa5.52□□□□□ -1.53
HDAC9-201ENST00000401921 SMR3AQ99954 134 aa5.52□□□□□ -1.53
HDAC9-201ENST00000401921 C1orf43Q9BWL3 253 aa5.52□□□□□ -1.53
HDAC9-201ENST00000401921 GCN1Q92616 2671 aaKnown RBP5.52□□□□□ -1.53
HDAC9-201ENST00000401921 CMC4P56277 68 aaPredicted RBP5.52□□□□□ -1.53
HDAC9-201ENST00000401921 DAZ2Q13117 558 aaKnown RBP5.52□□□□□ -1.53
HDAC9-201ENST00000401921 CLPSL2Q6UWE3 100 aa5.52□□□□□ -1.53
HDAC9-201ENST00000401921 DAZ4Q86SG3 579 aaKnown RBP5.52□□□□□ -1.53
HDAC9-201ENST00000401921 C5orf38Q86SI9 138 aa5.52□□□□□ -1.53
HDAC9-201ENST00000401921 LINC00526Q96FQ7 95 aa5.52□□□□□ -1.53
HDAC9-201ENST00000401921 DAZ3Q9NR90 486 aaKnown RBP5.52□□□□□ -1.53
HDAC9-201ENST00000401921 HTN3P15516 51 aa5.52□□□□□ -1.53
HDAC9-201ENST00000401921 PFN2P35080 140 aa5.52□□□□□ -1.53
HDAC9-201ENST00000401921 C4orf26Q17RF5 130 aa5.52□□□□□ -1.53
HDAC9-201ENST00000401921 KIR2DL5BQ8NHK3 375 aa5.52□□□□□ -1.53
HDAC9-201ENST00000401921 TRACP01848 142 aa5.51□□□□□ -1.53
HDAC9-201ENST00000401921 BEAN1Q3B7T3 259 aa5.51□□□□□ -1.53
HDAC9-201ENST00000401921 LINC00242Q5T6M2 205 aa5.51□□□□□ -1.53
HDAC9-201ENST00000401921 KRTAP3-3Q9BYR6 98 aa5.51□□□□□ -1.53
HDAC9-201ENST00000401921 KRTAP3-2Q9BYR7 98 aa5.51□□□□□ -1.53
HDAC9-201ENST00000401921 NIPBLQ6KC79 2804 aaeCLIP5.51□□□□□ -1.53
HDAC9-201ENST00000401921 SETXQ7Z333 2677 aaKnown RBP5.51□□□□□ -1.53
HDAC9-201ENST00000401921 TRBV10-1A0A0K0K1A3 114 aa5.51□□□□□ -1.53
HDAC9-201ENST00000401921 DEFB4AO15263 64 aa5.51□□□□□ -1.53
HDAC9-201ENST00000401921 RPS28P62857 69 aaKnown RBP5.51□□□□□ -1.53
HDAC9-201ENST00000401921 C16orf74Q96GX8 76 aa5.51□□□□□ -1.53
HDAC9-201ENST00000401921 SPANXCQ9NY87 97 aa5.51□□□□□ -1.53
HDAC9-201ENST00000401921 TRBV10-2A0A0K0K1G8 114 aa5.5□□□□□ -1.53
HDAC9-201ENST00000401921 TRBV7-7A0A0K0K1E9 115 aa5.5□□□□□ -1.53
HDAC9-201ENST00000401921 hADV29S1A0JD25 119 aa5.5□□□□□ -1.53
HDAC9-201ENST00000401921 PIK3CD-AS1Q5SR53 167 aa5.5□□□□□ -1.53
HDAC9-201ENST00000401921 J3QKU1 62 aa5.5□□□□□ -1.53
HDAC9-201ENST00000401921 TIRAPP58753 221 aa5.5□□□□□ -1.53
HDAC9-201ENST00000401921 NTM-AS1Q6ZSK4 140 aa5.5□□□□□ -1.53
HDAC9-201ENST00000401921 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.5□□□□□ -1.53
HDAC9-201ENST00000401921 COPS9Q8WXC6 57 aa5.5□□□□□ -1.53
HDAC9-201ENST00000401921 C6orf226Q5I0X4 101 aa5.49□□□□□ -1.53
HDAC9-201ENST00000401921 EIF4EBP3O60516 100 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-201ENST00000401921 COX7CP15954 63 aa5.49□□□□□ -1.53
HDAC9-201ENST00000401921 LINC00308Q8TCZ7 52 aa5.49□□□□□ -1.53
HDAC9-201ENST00000401921 F8WDY8 70 aa5.49□□□□□ -1.53
HDAC9-201ENST00000401921 NDUFA1O15239 70 aa5.49□□□□□ -1.53
HDAC9-201ENST00000401921 PAX4O43316 350 aa5.49□□□□□ -1.53
HDAC9-201ENST00000401921 XCL1P47992 114 aa5.49□□□□□ -1.53
HDAC9-201ENST00000401921 KRTAP1-3Q8IUG1 177 aa5.49□□□□□ -1.53
HDAC9-201ENST00000401921 TRBV30A0A0K0K1B3 111 aa5.48□□□□□ -1.53
HDAC9-201ENST00000401921 A8MTW9 85 aa5.48□□□□□ -1.53
HDAC9-201ENST00000401921 GYPEP15421 78 aa5.48□□□□□ -1.53
HDAC9-201ENST00000401921 FAM104AQ969W3 186 aa5.48□□□□□ -1.53
HDAC9-201ENST00000401921 SPANXDQ9BXN6 97 aa5.48□□□□□ -1.53
HDAC9-201ENST00000401921 IMUPQ9GZP8 106 aa5.48□□□□□ -1.53
HDAC9-201ENST00000401921 CDC42SE2Q9NRR3 84 aa5.48□□□□□ -1.53
HDAC9-201ENST00000401921 ATRQ13535 2644 aa5.48□□□□□ -1.53
HDAC9-201ENST00000401921 DSCR8Q96T75 97 aa5.48□□□□□ -1.53
HDAC9-201ENST00000401921 PKIGQ9Y2B9 76 aa5.48□□□□□ -1.53
HDAC9-201ENST00000401921 UBR5O95071 2799 aaPredicted RBP5.48□□□□□ -1.53
HDAC9-201ENST00000401921 SMIM1B2RUZ4 78 aa5.47□□□□□ -1.53
HDAC9-201ENST00000401921 CRPP02741 224 aa5.47□□□□□ -1.53
HDAC9-201ENST00000401921 LINC00482Q8N8I6 264 aa5.47□□□□□ -1.53
HDAC9-201ENST00000401921 DNAL4O96015 105 aa5.47□□□□□ -1.53
HDAC9-201ENST00000401921 RNASE1P07998 156 aaKnown RBP5.47□□□□□ -1.53
HDAC9-201ENST00000401921 MIR7-3HGQ8N6C7 128 aa5.47□□□□□ -1.53
HDAC9-201ENST00000401921 LITAFQ99732 161 aa5.47□□□□□ -1.53
HDAC9-201ENST00000401921 FAM240AA0A1B0GVK7 77 aa5.47□□□□□ -1.53
HDAC9-201ENST00000401921 IGLV1-51P01701 117 aa5.47□□□□□ -1.53
HDAC9-201ENST00000401921 ATP5G1P05496 136 aa5.47□□□□□ -1.53
HDAC9-201ENST00000401921 IGLV4-60A0A075B6I1 120 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms