RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 RNF183Q96D59 192 aa12.82□□□□□ -0.36
SNED1-204ENST00000401884 FLNBO75369 2602 aaKnown RBP12.82□□□□□ -0.36
SNED1-204ENST00000401884 TMEM256-PLSCR3K7ERE1 68 aa12.81□□□□□ -0.36
SNED1-204ENST00000401884 INAFM1C9JVW0 142 aa12.81□□□□□ -0.36
SNED1-204ENST00000401884 LST1O00453 97 aa12.81□□□□□ -0.36
SNED1-204ENST00000401884 ATOX1O00244 68 aa12.8□□□□□ -0.36
SNED1-204ENST00000401884 MUC4Q99102 2169 aa12.8□□□□□ -0.36
SNED1-204ENST00000401884 RBM3P98179 157 aaKnown RBP12.8□□□□□ -0.36
SNED1-204ENST00000401884 CCL18P55774 89 aa12.79□□□□□ -0.36
SNED1-204ENST00000401884 C1orf158Q8N1D5 194 aa12.79□□□□□ -0.36
SNED1-204ENST00000401884 DIRC1Q969H9 104 aa12.79□□□□□ -0.36
SNED1-204ENST00000401884 CHCHD7Q9BUK0 85 aa12.79□□□□□ -0.36
SNED1-204ENST00000401884 SPATA25Q9BR10 227 aa12.79□□□□□ -0.36
SNED1-204ENST00000401884 NDUFV3P56181 108 aaKnown RBP12.78□□□□□ -0.36
SNED1-204ENST00000401884 RBMY1FQ15415 496 aaKnown RBP12.78□□□□□ -0.36
SNED1-204ENST00000401884 ETDCA0A1B0GVM5 59 aa12.78□□□□□ -0.36
SNED1-204ENST00000401884 HILS1P60008 231 aa12.78□□□□□ -0.36
SNED1-204ENST00000401884 AMELXQ99217 191 aa12.78□□□□□ -0.36
SNED1-204ENST00000401884 SLPIP03973 132 aa12.78□□□□□ -0.36
SNED1-204ENST00000401884 XGP55808 180 aa12.77□□□□□ -0.36
SNED1-204ENST00000401884 LINC00315P59091 139 aa12.77□□□□□ -0.36
SNED1-204ENST00000401884 HIGD2BQ4VC39 106 aa12.77□□□□□ -0.36
SNED1-204ENST00000401884 SMIM20Q8N5G0 67 aa12.77□□□□□ -0.37
SNED1-204ENST00000401884 Q6ZSN1 163 aa12.76□□□□□ -0.37
SNED1-204ENST00000401884 LINC00694P0DN24 101 aa12.76□□□□□ -0.37
SNED1-204ENST00000401884 LINC00959A0A1B0GUT2 108 aa12.76□□□□□ -0.37
SNED1-204ENST00000401884 LINC01546A6NGU7 62 aa12.76□□□□□ -0.37
SNED1-204ENST00000401884 ZNF292O60281 2723 aa12.76□□□□□ -0.37
SNED1-204ENST00000401884 UBE2BP63146 152 aa12.75□□□□□ -0.37
SNED1-204ENST00000401884 SMIM1B2RUZ4 78 aa12.75□□□□□ -0.37
SNED1-204ENST00000401884 ADAMTSL4-AS1Q5T5F5 129 aa12.74□□□□□ -0.37
SNED1-204ENST00000401884 COL27A1Q8IZC6 1860 aaPredicted RBP12.73□□□□□ -0.37
SNED1-204ENST00000401884 MIFP14174 115 aa12.73□□□□□ -0.37
SNED1-204ENST00000401884 LAMA1P25391 3075 aa12.73□□□□□ -0.37
SNED1-204ENST00000401884 BEAN1Q3B7T3 259 aa12.73□□□□□ -0.37
SNED1-204ENST00000401884 XAGE1AQ9HD64 81 aa12.73□□□□□ -0.37
SNED1-204ENST00000401884 FUSP35637 526 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNED1-204ENST00000401884 COX6A2Q02221 97 aa12.72□□□□□ -0.37
SNED1-204ENST00000401884 hADV29S1A0JD25 119 aa12.72□□□□□ -0.37
SNED1-204ENST00000401884 C6orf99Q4VX62 202 aa12.72□□□□□ -0.37
SNED1-204ENST00000401884 IGLV1-51P01701 117 aa12.72□□□□□ -0.37
SNED1-204ENST00000401884 FAM19A4Q96LR4 140 aa12.72□□□□□ -0.37
SNED1-204ENST00000401884 CD164L2Q6UWJ8 174 aa12.72□□□□□ -0.37
SNED1-204ENST00000401884 LY6G6DO95868 133 aa12.71□□□□□ -0.37
SNED1-204ENST00000401884 IGHV4-28A0A0C4DH34 117 aa12.71□□□□□ -0.37
SNED1-204ENST00000401884 LINC00526Q96FQ7 95 aa12.71□□□□□ -0.37
SNED1-204ENST00000401884 H3BQ85 93 aa12.7□□□□□ -0.38
SNED1-204ENST00000401884 SZT2Q5T011 3432 aa12.69□□□□□ -0.38
SNED1-204ENST00000401884 COX7BP24311 80 aa12.69□□□□□ -0.38
SNED1-204ENST00000401884 NREPQ16612 68 aa12.69□□□□□ -0.38
SNED1-204ENST00000401884 SMIM11BQ8TCY0 68 aa12.69□□□□□ -0.38
SNED1-204ENST00000401884 SDIM1Q6ZPB5 146 aa12.69□□□□□ -0.38
SNED1-204ENST00000401884 MAP1AP78559 2803 aaPredicted RBP12.68□□□□□ -0.38
SNED1-204ENST00000401884 CSDC2Q9Y534 153 aaKnown RBP12.68□□□□□ -0.38
SNED1-204ENST00000401884 CDK2AP2O75956 126 aa12.68□□□□□ -0.38
SNED1-204ENST00000401884 C11orf45Q8TAV5 145 aa12.68□□□□□ -0.38
SNED1-204ENST00000401884 VCANP13611 3396 aa12.67□□□□□ -0.38
SNED1-204ENST00000401884 SMR3AQ99954 134 aa12.67□□□□□ -0.38
SNED1-204ENST00000401884 IGLV4-60A0A075B6I1 120 aa12.67□□□□□ -0.38
SNED1-204ENST00000401884 FAM110AQ9BQ89 295 aa12.67□□□□□ -0.38
SNED1-204ENST00000401884 PDE6GP18545 87 aa12.67□□□□□ -0.38
SNED1-204ENST00000401884 HECTD1Q9ULT8 2610 aa12.66□□□□□ -0.38
SNED1-204ENST00000401884 KLK9Q2XQG4 91 aa12.65□□□□□ -0.38
SNED1-204ENST00000401884 KIR2DL5BQ8NHK3 375 aa12.65□□□□□ -0.38
SNED1-204ENST00000401884 USP24Q9UPU5 2620 aa12.64□□□□□ -0.39
SNED1-204ENST00000401884 DEFB131BA0A096LNP1 70 aa12.64□□□□□ -0.39
SNED1-204ENST00000401884 CELSR3Q9NYQ7 3312 aa12.63□□□□□ -0.39
SNED1-204ENST00000401884 TRAV23DV6A0A075B6W5 121 aa12.63□□□□□ -0.39
SNED1-204ENST00000401884 DSPP15924 2871 aaKnown RBP12.63□□□□□ -0.39
SNED1-204ENST00000401884 Q8IZM0 81 aa12.63□□□□□ -0.39
SNED1-204ENST00000401884 C11orf72Q8NBR9 251 aa12.63□□□□□ -0.39
SNED1-204ENST00000401884 A0A087WZ39 114 aa12.62□□□□□ -0.39
SNED1-204ENST00000401884 FHL2Q14192 279 aa12.62□□□□□ -0.39
SNED1-204ENST00000401884 LELP1Q5T871 98 aa12.62□□□□□ -0.39
SNED1-204ENST00000401884 Q9UF83 564 aa12.61□□□□□ -0.39
SNED1-204ENST00000401884 DNAH14Q0VDD8 3507 aa12.61□□□□□ -0.39
SNED1-204ENST00000401884 CLUHP3Q96NS8 147 aa12.6□□□□□ -0.39
SNED1-204ENST00000401884 PLA2G2AP14555 144 aa12.6□□□□□ -0.39
SNED1-204ENST00000401884 UQCRQO14949 82 aa12.59□□□□□ -0.39
SNED1-204ENST00000401884 KPRPQ5T749 579 aaPredicted RBP12.59□□□□□ -0.39
SNED1-204ENST00000401884 Q6ZQY7 126 aa12.59□□□□□ -0.39
SNED1-204ENST00000401884 F8P00451 2351 aa12.59□□□□□ -0.39
SNED1-204ENST00000401884 IMUPQ9GZP8 106 aa12.58□□□□□ -0.4
SNED1-204ENST00000401884 RPL28P46779 137 aaKnown RBP12.57□□□□□ -0.4
SNED1-204ENST00000401884 Q8N2B8 174 aa12.57□□□□□ -0.4
SNED1-204ENST00000401884 UPK3BQ9BT76 320 aa12.57□□□□□ -0.4
SNED1-204ENST00000401884 FAM240AA0A1B0GVK7 77 aa12.56□□□□□ -0.4
SNED1-204ENST00000401884 CYSRT1A8MQ03 144 aa12.56□□□□□ -0.4
SNED1-204ENST00000401884 IGHV4-30-4P0DP06 118 aa12.55□□□□□ -0.4
SNED1-204ENST00000401884 SYCNQ0VAF6 134 aa12.55□□□□□ -0.4
SNED1-204ENST00000401884 UNQ6190/PRO20217Q6UXQ8 127 aa12.55□□□□□ -0.4
SNED1-204ENST00000401884 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.55□□□□□ -0.4
SNED1-204ENST00000401884 ENHOQ6UWT2 76 aa12.55□□□□□ -0.4
SNED1-204ENST00000401884 C9orf116Q5BN46 136 aaPredicted RBP12.54□□□□□ -0.4
SNED1-204ENST00000401884 IGKV2-24A0A0C4DH68 120 aa12.54□□□□□ -0.4
SNED1-204ENST00000401884 COX17Q14061 63 aa12.54□□□□□ -0.4
SNED1-204ENST00000401884 OXLD1Q5BKU9 147 aa12.54□□□□□ -0.4
SNED1-204ENST00000401884 C16orf95Q9H693 158 aa12.54□□□□□ -0.4
SNED1-204ENST00000401884 FLNAP21333 2647 aaKnown RBP12.54□□□□□ -0.4
SNED1-204ENST00000401884 C20orf197Q8N268 126 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms