RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 FAM19A5Q7Z5A7 132 aaPredicted RBP12.12□□□□□ -0.47
TSC2-204ENST00000401874 V9GYY9 64 aa12.11□□□□□ -0.47
TSC2-204ENST00000401874 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.11□□□□□ -0.47
TSC2-204ENST00000401874 INAFM1C9JVW0 142 aa12.11□□□□□ -0.47
TSC2-204ENST00000401874 AVPP01185 164 aa12.11□□□□□ -0.47
TSC2-204ENST00000401874 C1orf158Q8N1D5 194 aa12.11□□□□□ -0.47
TSC2-204ENST00000401874 IGKV4-1P06312 121 aa12.11□□□□□ -0.47
TSC2-204ENST00000401874 EML5Q05BV3 1969 aa12.1□□□□□ -0.47
TSC2-204ENST00000401874 RPL28P46779 137 aaKnown RBP12.1□□□□□ -0.47
TSC2-204ENST00000401874 BDP1A6H8Y1 2624 aa12.1□□□□□ -0.47
TSC2-204ENST00000401874 ODF3L2Q3SX64 289 aa12.1□□□□□ -0.47
TSC2-204ENST00000401874 GOLGB1Q14789 3259 aaKnown RBP12.1□□□□□ -0.47
TSC2-204ENST00000401874 ZNF73O43830 326 aaPredicted RBP12.09□□□□□ -0.47
TSC2-204ENST00000401874 ZNF843Q8N446 348 aa12.09□□□□□ -0.47
TSC2-204ENST00000401874 MPLKIPQ8TAP9 179 aa12.09□□□□□ -0.47
TSC2-204ENST00000401874 C3orf84H3BNL1 204 aa12.08□□□□□ -0.47
TSC2-204ENST00000401874 OTOGLQ3ZCN5 2332 aa12.08□□□□□ -0.48
TSC2-204ENST00000401874 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
TSC2-204ENST00000401874 TRAV10A0A0B4J240 114 aa12.08□□□□□ -0.48
TSC2-204ENST00000401874 KPRPQ5T749 579 aaPredicted RBP12.08□□□□□ -0.48
TSC2-204ENST00000401874 FAM19A3Q7Z5A8 133 aa12.08□□□□□ -0.48
TSC2-204ENST00000401874 LINC00526Q96FQ7 95 aa12.08□□□□□ -0.48
TSC2-204ENST00000401874 IGKV2-28A0A075B6P5 120 aa12.07□□□□□ -0.48
TSC2-204ENST00000401874 IGKV2D-28P01615 120 aa12.07□□□□□ -0.48
TSC2-204ENST00000401874 A0A087WZ39 114 aa12.06□□□□□ -0.48
TSC2-204ENST00000401874 CLUHP3Q96NS8 147 aa12.06□□□□□ -0.48
TSC2-204ENST00000401874 SHISA2Q6UWI4 295 aa12.06□□□□□ -0.48
TSC2-204ENST00000401874 NAV3Q8IVL0 2385 aa12.06□□□□□ -0.48
TSC2-204ENST00000401874 COX6A2Q02221 97 aa12.06□□□□□ -0.48
TSC2-204ENST00000401874 WNK1Q9H4A3 2382 aa12.05□□□□□ -0.48
TSC2-204ENST00000401874 ADAMTSL4-AS1Q5T5F5 129 aa12.05□□□□□ -0.48
TSC2-204ENST00000401874 A0A096LNI7 61 aa12.04□□□□□ -0.48
TSC2-204ENST00000401874 LINC01546A6NGU7 62 aa12.04□□□□□ -0.48
TSC2-204ENST00000401874 SNURFQ9Y675 71 aa12.04□□□□□ -0.48
TSC2-204ENST00000401874 CYSRT1A8MQ03 144 aa12.04□□□□□ -0.48
TSC2-204ENST00000401874 M0QXV9 152 aa12.04□□□□□ -0.48
TSC2-204ENST00000401874 NTM-AS1Q6ZSK4 140 aa12.04□□□□□ -0.48
TSC2-204ENST00000401874 WFDC10BQ8IUB3 73 aa12.04□□□□□ -0.48
TSC2-204ENST00000401874 BEAN1Q3B7T3 259 aa12.03□□□□□ -0.48
TSC2-204ENST00000401874 LY6G6DO95868 133 aa12.03□□□□□ -0.48
TSC2-204ENST00000401874 SEC61GP60059 68 aa12.02□□□□□ -0.48
TSC2-204ENST00000401874 Q8N814 137 aa12.02□□□□□ -0.48
TSC2-204ENST00000401874 CSPG4Q6UVK1 2322 aa12.02□□□□□ -0.48
TSC2-204ENST00000401874 CUL9Q8IWT3 2517 aa12.01□□□□□ -0.49
TSC2-204ENST00000401874 LINC00694P0DN24 101 aa12.01□□□□□ -0.49
TSC2-204ENST00000401874 LOC107984640A0A0U1RRK4 108 aa12.01□□□□□ -0.49
TSC2-204ENST00000401874 EXPH5Q8NEV8 1989 aa12□□□□□ -0.49
TSC2-204ENST00000401874 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12□□□□□ -0.49
TSC2-204ENST00000401874 IGLV1-51P01701 117 aa11.99□□□□□ -0.49
TSC2-204ENST00000401874 A0A087WYN8 130 aa11.99□□□□□ -0.49
TSC2-204ENST00000401874 A0A0U1RQV1 116 aa11.99□□□□□ -0.49
TSC2-204ENST00000401874 EGFEM1PQ0D2K5 195 aa11.98□□□□□ -0.49
TSC2-204ENST00000401874 IGLV4-60A0A075B6I1 120 aa11.98□□□□□ -0.49
TSC2-204ENST00000401874 UNQ6190/PRO20217Q6UXQ8 127 aa11.98□□□□□ -0.49
TSC2-204ENST00000401874 FHL2Q14192 279 aa11.98□□□□□ -0.49
TSC2-204ENST00000401874 SPTSSBQ8NFR3 76 aa11.98□□□□□ -0.49
TSC2-204ENST00000401874 TRAV7A0A075B6U4 112 aa11.97□□□□□ -0.49
TSC2-204ENST00000401874 A0A1W2PPR1 153 aa11.97□□□□□ -0.49
TSC2-204ENST00000401874 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.97□□□□□ -0.49
TSC2-204ENST00000401874 KIF25-AS1Q9Y6Z4 181 aa11.97□□□□□ -0.49
TSC2-204ENST00000401874 Q6ZSN1 163 aa11.95□□□□□ -0.5
TSC2-204ENST00000401874 ZNF706Q9Y5V0 76 aaPredicted RBP11.95□□□□□ -0.5
TSC2-204ENST00000401874 WFDC13Q8IUB5 93 aa11.95□□□□□ -0.5
TSC2-204ENST00000401874 RPL37AP8A6NKH3 93 aa11.95□□□□□ -0.5
TSC2-204ENST00000401874 ARHGAP32A7KAX9 2087 aa11.95□□□□□ -0.5
TSC2-204ENST00000401874 TRBV10-3A0A0K0K1G6 114 aa11.94□□□□□ -0.5
TSC2-204ENST00000401874 CASC2Q6XLA1 102 aa11.94□□□□□ -0.5
TSC2-204ENST00000401874 C9orf116Q5BN46 136 aaPredicted RBP11.93□□□□□ -0.5
TSC2-204ENST00000401874 ATRXP46100 2492 aa11.92□□□□□ -0.5
TSC2-204ENST00000401874 IGHV4-30-4P0DP06 118 aa11.92□□□□□ -0.5
TSC2-204ENST00000401874 LINC01561Q8N1V8 128 aa11.92□□□□□ -0.5
TSC2-204ENST00000401874 RAI1Q7Z5J4 1906 aaPredicted RBP11.92□□□□□ -0.5
TSC2-204ENST00000401874 A0A1B0GUV1 79 aa11.91□□□□□ -0.5
TSC2-204ENST00000401874 PPDPFQ9H3Y8 114 aa11.91□□□□□ -0.5
TSC2-204ENST00000401874 C16orf95Q9H693 158 aa11.91□□□□□ -0.5
TSC2-204ENST00000401874 A0A087WVE0 104 aa11.91□□□□□ -0.5
TSC2-204ENST00000401874 SMIM26A0A096LP01 95 aa11.91□□□□□ -0.5
TSC2-204ENST00000401874 SERP1Q9Y6X1 66 aa11.89□□□□□ -0.51
TSC2-204ENST00000401874 FAM30AQ9NZY2 134 aa11.89□□□□□ -0.51
TSC2-204ENST00000401874 PRR3P79522 188 aaKnown RBP11.89□□□□□ -0.51
TSC2-204ENST00000401874 NANOS2P60321 138 aaKnown RBP11.88□□□□□ -0.51
TSC2-204ENST00000401874 C1orf195Q5TG92 126 aa11.88□□□□□ -0.51
TSC2-204ENST00000401874 A0A0J9YWU9 116 aa11.87□□□□□ -0.51
TSC2-204ENST00000401874 CDIP1Q9H305 208 aa11.87□□□□□ -0.51
TSC2-204ENST00000401874 LINC00474Q9P2X8 69 aa11.87□□□□□ -0.51
TSC2-204ENST00000401874 F8WDY8 70 aa11.87□□□□□ -0.51
TSC2-204ENST00000401874 FAM19A4Q96LR4 140 aa11.87□□□□□ -0.51
TSC2-204ENST00000401874 PRR15LQ9BU68 103 aa11.87□□□□□ -0.51
TSC2-204ENST00000401874 NAV2Q8IVL1 2488 aa11.86□□□□□ -0.51
TSC2-204ENST00000401874 C7orf33Q8WU49 177 aa11.86□□□□□ -0.51
TSC2-204ENST00000401874 PLAC8L1A1L4L8 177 aa11.86□□□□□ -0.51
TSC2-204ENST00000401874 ADAMTS20P59510 1910 aa11.86□□□□□ -0.51
TSC2-204ENST00000401874 KRTAP10-9P60411 292 aa11.86□□□□□ -0.51
TSC2-204ENST00000401874 C1orf137Q5JT78 98 aa11.86□□□□□ -0.51
TSC2-204ENST00000401874 SORL1Q92673 2214 aa11.86□□□□□ -0.51
TSC2-204ENST00000401874 IGLV5-39A0A0G2JS06 123 aa11.85□□□□□ -0.51
TSC2-204ENST00000401874 LINC00315P59091 139 aa11.85□□□□□ -0.51
TSC2-204ENST00000401874 CACNA1AO00555 2505 aa11.85□□□□□ -0.51
TSC2-204ENST00000401874 TRBV7-7A0A0K0K1E9 115 aa11.84□□□□□ -0.51
TSC2-204ENST00000401874 NOTCH2Q04721 2471 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms