RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 LITAFQ99732 161 aa8.51□□□□□ -1.05
CLIP4-203ENST00000401617 A0A1W2PPM0 123 aa8.5□□□□□ -1.05
CLIP4-203ENST00000401617 G3V4G9 280 aa8.5□□□□□ -1.05
CLIP4-203ENST00000401617 SAMD5Q5TGI4 173 aa8.5□□□□□ -1.05
CLIP4-203ENST00000401617 IGLL5B9A064 214 aa8.49□□□□□ -1.05
CLIP4-203ENST00000401617 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
CLIP4-203ENST00000401617 NDUFA1O15239 70 aa8.49□□□□□ -1.05
CLIP4-203ENST00000401617 NAA38Q9BRA0 125 aaKnown RBP8.49□□□□□ -1.05
CLIP4-203ENST00000401617 TIMM17BO60830 172 aa8.48□□□□□ -1.05
CLIP4-203ENST00000401617 C11orf68Q9H3H3 251 aaKnown RBP8.48□□□□□ -1.05
CLIP4-203ENST00000401617 RBX1P62877 108 aa8.48□□□□□ -1.05
CLIP4-203ENST00000401617 SH2D6Q7Z4S9 175 aa8.48□□□□□ -1.05
CLIP4-203ENST00000401617 SPANXDQ9BXN6 97 aa8.48□□□□□ -1.05
CLIP4-203ENST00000401617 RETNQ9HD89 108 aa8.48□□□□□ -1.05
CLIP4-203ENST00000401617 SPANXCQ9NY87 97 aa8.48□□□□□ -1.05
CLIP4-203ENST00000401617 A0A096LPF7 62 aa8.47□□□□□ -1.05
CLIP4-203ENST00000401617 IGHV3OR16-9A0A0B4J2B5 98 aa8.47□□□□□ -1.05
CLIP4-203ENST00000401617 MRPL23Q16540 153 aaKnown RBP8.47□□□□□ -1.05
CLIP4-203ENST00000401617 GAGE10A6NGK3 116 aa8.46□□□□□ -1.05
CLIP4-203ENST00000401617 K7EP34 96 aa8.46□□□□□ -1.05
CLIP4-203ENST00000401617 CFC1BP0CG36 223 aa8.46□□□□□ -1.05
CLIP4-203ENST00000401617 CFC1P0CG37 223 aa8.46□□□□□ -1.05
CLIP4-203ENST00000401617 FABP2P12104 132 aa8.46□□□□□ -1.05
CLIP4-203ENST00000401617 ADAMTSL4-AS1Q5T5F5 129 aa8.46□□□□□ -1.05
CLIP4-203ENST00000401617 LINC00959A0A1B0GUT2 108 aa8.46□□□□□ -1.06
CLIP4-203ENST00000401617 GTF2H5Q6ZYL4 71 aa8.46□□□□□ -1.06
CLIP4-203ENST00000401617 MUSTN1Q8IVN3 82 aa8.46□□□□□ -1.06
CLIP4-203ENST00000401617 ZNF625Q96I27 306 aaPredicted RBP8.46□□□□□ -1.06
CLIP4-203ENST00000401617 TMEM262E9PQX1 116 aa8.45□□□□□ -1.06
CLIP4-203ENST00000401617 ICOSQ9Y6W8 199 aa8.45□□□□□ -1.06
CLIP4-203ENST00000401617 RPL24P83731 157 aaKnown RBP8.45□□□□□ -1.06
CLIP4-203ENST00000401617 A0A087WZ39 114 aa8.44□□□□□ -1.06
CLIP4-203ENST00000401617 A4D1N5 150 aa8.44□□□□□ -1.06
CLIP4-203ENST00000401617 H3BNG1 76 aa8.44□□□□□ -1.06
CLIP4-203ENST00000401617 MIAQ16674 131 aa8.44□□□□□ -1.06
CLIP4-203ENST00000401617 Q9H8V8 135 aa8.44□□□□□ -1.06
CLIP4-203ENST00000401617 SPCS1Q9Y6A9 102 aa8.44□□□□□ -1.06
CLIP4-203ENST00000401617 EIF4EBP3O60516 100 aaPredicted RBP8.44□□□□□ -1.06
CLIP4-203ENST00000401617 HTN3P15516 51 aa8.44□□□□□ -1.06
CLIP4-203ENST00000401617 LELP1Q5T871 98 aa8.44□□□□□ -1.06
CLIP4-203ENST00000401617 APOMO95445 188 aa8.43□□□□□ -1.06
CLIP4-203ENST00000401617 PGPEP1Q9NXJ5 209 aa8.43□□□□□ -1.06
CLIP4-203ENST00000401617 NOTCH1P46531 2555 aa8.43□□□□□ -1.06
CLIP4-203ENST00000401617 A0A0B4J2C4 111 aa8.42□□□□□ -1.06
CLIP4-203ENST00000401617 IGKV3OR2-268A0A0C4DH90 116 aa8.42□□□□□ -1.06
CLIP4-203ENST00000401617 IFITM1P13164 125 aa8.42□□□□□ -1.06
CLIP4-203ENST00000401617 HERV-K104P63124 156 aa8.42□□□□□ -1.06
CLIP4-203ENST00000401617 TENM3Q9P273 2699 aa8.42□□□□□ -1.06
CLIP4-203ENST00000401617 TSPAN13O95857 204 aa8.42□□□□□ -1.06
CLIP4-203ENST00000401617 LINC01561Q8N1V8 128 aa8.42□□□□□ -1.06
CLIP4-203ENST00000401617 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.41□□□□□ -1.06
CLIP4-203ENST00000401617 SS18Q15532 418 aa8.41□□□□□ -1.06
CLIP4-203ENST00000401617 COX7B2Q8TF08 81 aa8.41□□□□□ -1.06
CLIP4-203ENST00000401617 PRO1854Q9UHT4 67 aa8.41□□□□□ -1.06
CLIP4-203ENST00000401617 CIRBPQ14011 172 aaKnown RBP8.41□□□□□ -1.06
CLIP4-203ENST00000401617 PRSS2P07478 247 aa8.4□□□□□ -1.06
CLIP4-203ENST00000401617 KPRPQ5T749 579 aaPredicted RBP8.4□□□□□ -1.06
CLIP4-203ENST00000401617 LYPD5Q6UWN5 251 aa8.4□□□□□ -1.06
CLIP4-203ENST00000401617 IGHV3-33P01772 117 aa8.39□□□□□ -1.07
CLIP4-203ENST00000401617 Q6ZTC4 211 aa8.39□□□□□ -1.07
CLIP4-203ENST00000401617 PPDPFQ9H3Y8 114 aa8.39□□□□□ -1.07
CLIP4-203ENST00000401617 NBEAL1Q6ZS30 2694 aa8.39□□□□□ -1.07
CLIP4-203ENST00000401617 A0A0J9YWU9 116 aa8.39□□□□□ -1.07
CLIP4-203ENST00000401617 C5orf38Q86SI9 138 aa8.39□□□□□ -1.07
CLIP4-203ENST00000401617 LINC00269Q8N2A0 174 aa8.39□□□□□ -1.07
CLIP4-203ENST00000401617 Q8N3U1 123 aa8.39□□□□□ -1.07
CLIP4-203ENST00000401617 K7EIL1 84 aa8.38□□□□□ -1.07
CLIP4-203ENST00000401617 TM2D3Q9BRN9 247 aa8.38□□□□□ -1.07
CLIP4-203ENST00000401617 ANGP03950 147 aaKnown RBP8.37□□□□□ -1.07
CLIP4-203ENST00000401617 XCL1P47992 114 aa8.37□□□□□ -1.07
CLIP4-203ENST00000401617 REG3AQ06141 175 aa8.37□□□□□ -1.07
CLIP4-203ENST00000401617 CLPSL2Q6UWE3 100 aa8.37□□□□□ -1.07
CLIP4-203ENST00000401617 CD164L2Q6UWJ8 174 aa8.37□□□□□ -1.07
CLIP4-203ENST00000401617 LINC00308Q8TCZ7 52 aa8.37□□□□□ -1.07
CLIP4-203ENST00000401617 DAND5Q8N907 189 aa8.37□□□□□ -1.07
CLIP4-203ENST00000401617 PRR34Q9NV39 138 aa8.37□□□□□ -1.07
CLIP4-203ENST00000401617 SFTA2Q6UW10 78 aa8.36□□□□□ -1.07
CLIP4-203ENST00000401617 C11orf45Q8TAV5 145 aa8.36□□□□□ -1.07
CLIP4-203ENST00000401617 SPATA25Q9BR10 227 aa8.36□□□□□ -1.07
CLIP4-203ENST00000401617 HUWE1Q7Z6Z7 4374 aaKnown RBP8.36□□□□□ -1.07
CLIP4-203ENST00000401617 NANOS2P60321 138 aaKnown RBP8.35□□□□□ -1.07
CLIP4-203ENST00000401617 MEIG1Q5JSS6 88 aa8.35□□□□□ -1.07
CLIP4-203ENST00000401617 SOSTDC1Q6X4U4 206 aa8.35□□□□□ -1.07
CLIP4-203ENST00000401617 COPS9Q8WXC6 57 aa8.35□□□□□ -1.07
CLIP4-203ENST00000401617 CHCHD10Q8WYQ3 142 aaPredicted RBP8.35□□□□□ -1.07
CLIP4-203ENST00000401617 TOMM7Q9P0U1 55 aa8.35□□□□□ -1.07
CLIP4-203ENST00000401617 ERG28Q9UKR5 140 aa8.35□□□□□ -1.07
CLIP4-203ENST00000401617 PRB2P02812 416 aaPredicted RBP8.35□□□□□ -1.07
CLIP4-203ENST00000401617 Q8IZM0 81 aa8.35□□□□□ -1.07
CLIP4-203ENST00000401617 NPC2P61916 151 aa8.34□□□□□ -1.07
CLIP4-203ENST00000401617 LYRM7Q5U5X0 104 aa8.34□□□□□ -1.07
CLIP4-203ENST00000401617 MGAM2Q2M2H8 2515 aa8.34□□□□□ -1.07
CLIP4-203ENST00000401617 DEFB131BA0A096LNP1 70 aa8.34□□□□□ -1.08
CLIP4-203ENST00000401617 FOXI1Q12951 378 aa8.34□□□□□ -1.08
CLIP4-203ENST00000401617 MDFIQ99750 246 aa8.34□□□□□ -1.08
CLIP4-203ENST00000401617 IBA57-AS1B1ANH7 110 aa8.33□□□□□ -1.08
CLIP4-203ENST00000401617 H3BMG7 143 aa8.33□□□□□ -1.08
CLIP4-203ENST00000401617 COX7A2LO14548 114 aa8.33□□□□□ -1.08
CLIP4-203ENST00000401617 LOC107984156A0A0G2JMH3 177 aa8.32□□□□□ -1.08
CLIP4-203ENST00000401617 A0A0U1RRA0 63 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms