RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 C11orf1Q9H5F2 150 aa10.07□□□□□ -0.8
VAPA-202ENST00000400000 ZNF295-AS1Q8N0V1 137 aa10.07□□□□□ -0.8
VAPA-202ENST00000400000 RNASE3P12724 160 aaKnown RBP10.07□□□□□ -0.8
VAPA-202ENST00000400000 FAM236DA0A1B0GTK5 79 aa10.06□□□□□ -0.8
VAPA-202ENST00000400000 FAM236CP0DP71 79 aa10.06□□□□□ -0.8
VAPA-202ENST00000400000 ODF3Q96PU9 254 aa10.06□□□□□ -0.8
VAPA-202ENST00000400000 C11orf21Q9P2W6 132 aa10.06□□□□□ -0.8
VAPA-202ENST00000400000 PSMG3-AS1Q96PY0 264 aa10.06□□□□□ -0.8
VAPA-202ENST00000400000 M0QXV9 152 aa10.06□□□□□ -0.8
VAPA-202ENST00000400000 PDE6GP18545 87 aa10.05□□□□□ -0.8
VAPA-202ENST00000400000 C6orf223Q8N319 242 aa10.05□□□□□ -0.8
VAPA-202ENST00000400000 ATG2AQ2TAZ0 1938 aa10.05□□□□□ -0.8
VAPA-202ENST00000400000 LTBP2Q14767 1821 aa10.05□□□□□ -0.8
VAPA-202ENST00000400000 CD164L2Q6UWJ8 174 aa10.05□□□□□ -0.8
VAPA-202ENST00000400000 H7C423 109 aa10.05□□□□□ -0.8
VAPA-202ENST00000400000 LELP1Q5T871 98 aa10.04□□□□□ -0.8
VAPA-202ENST00000400000 ESRGQ1W209 222 aa10.04□□□□□ -0.8
VAPA-202ENST00000400000 SERP1Q9Y6X1 66 aa10.04□□□□□ -0.8
VAPA-202ENST00000400000 P0C879 139 aa10.04□□□□□ -0.8
VAPA-202ENST00000400000 LINC01556Q5JQF7 62 aa10.04□□□□□ -0.8
VAPA-202ENST00000400000 COL5A1P20908 1838 aaPredicted RBP10.04□□□□□ -0.8
VAPA-202ENST00000400000 M0R378 163 aa10.04□□□□□ -0.8
VAPA-202ENST00000400000 CYSRT1A8MQ03 144 aa10.04□□□□□ -0.8
VAPA-202ENST00000400000 A6NED7 52 aa10.03□□□□□ -0.8
VAPA-202ENST00000400000 IGHV6-1A0A0B4J1U7 121 aa10.03□□□□□ -0.8
VAPA-202ENST00000400000 UNQ6190/PRO20217Q6UXQ8 127 aa10.03□□□□□ -0.8
VAPA-202ENST00000400000 GOLGB1Q14789 3259 aaKnown RBP10.03□□□□□ -0.8
VAPA-202ENST00000400000 CRIP3Q6Q6R5 217 aa10.02□□□□□ -0.81
VAPA-202ENST00000400000 Q6ZTC4 211 aa10.02□□□□□ -0.81
VAPA-202ENST00000400000 COX6A2Q02221 97 aa10.01□□□□□ -0.81
VAPA-202ENST00000400000 C10orf25Q5T742 122 aa10.01□□□□□ -0.81
VAPA-202ENST00000400000 ZNF706Q9Y5V0 76 aaPredicted RBP10.01□□□□□ -0.81
VAPA-202ENST00000400000 NAV3Q8IVL0 2385 aa10.01□□□□□ -0.81
VAPA-202ENST00000400000 C1orf137Q5JT78 98 aa10.01□□□□□ -0.81
VAPA-202ENST00000400000 PRR15LQ9BU68 103 aa10□□□□□ -0.81
VAPA-202ENST00000400000 TRBV27A0A0K0K1C4 114 aa10□□□□□ -0.81
VAPA-202ENST00000400000 EIF4EBP1Q13541 118 aaPredicted RBP10□□□□□ -0.81
VAPA-202ENST00000400000 NRACQ8N912 160 aa9.99□□□□□ -0.81
VAPA-202ENST00000400000 Q8N9L7 120 aa9.99□□□□□ -0.81
VAPA-202ENST00000400000 ZNF73O43830 326 aaPredicted RBP9.99□□□□□ -0.81
VAPA-202ENST00000400000 EML5Q05BV3 1969 aa9.98□□□□□ -0.81
VAPA-202ENST00000400000 PCOTHQ58A44 107 aa9.98□□□□□ -0.81
VAPA-202ENST00000400000 DHRS4-AS1Q9P1J3 65 aa9.98□□□□□ -0.81
VAPA-202ENST00000400000 TTC28Q96AY4 2481 aa9.97□□□□□ -0.81
VAPA-202ENST00000400000 NDUFC2-KCTD14E9PQ53 114 aa9.97□□□□□ -0.81
VAPA-202ENST00000400000 LINC00574Q9H8X3 128 aa9.97□□□□□ -0.81
VAPA-202ENST00000400000 MRGPRG-AS1Q2M3A8 158 aa9.97□□□□□ -0.81
VAPA-202ENST00000400000 IGLV4-60A0A075B6I1 120 aa9.97□□□□□ -0.81
VAPA-202ENST00000400000 A8MTW9 85 aa9.96□□□□□ -0.82
VAPA-202ENST00000400000 Q6Q795 121 aa9.96□□□□□ -0.82
VAPA-202ENST00000400000 PRO3102Q9H379 93 aa9.95□□□□□ -0.82
VAPA-202ENST00000400000 EBI3Q14213 229 aa9.95□□□□□ -0.82
VAPA-202ENST00000400000 ABCA2Q9BZC7 2435 aa9.95□□□□□ -0.82
VAPA-202ENST00000400000 REG3GQ6UW15 175 aa9.95□□□□□ -0.82
VAPA-202ENST00000400000 U3KQK5 164 aa9.95□□□□□ -0.82
VAPA-202ENST00000400000 LINC00694P0DN24 101 aa9.95□□□□□ -0.82
VAPA-202ENST00000400000 ACACBO00763 2458 aa9.95□□□□□ -0.82
VAPA-202ENST00000400000 SBSPONQ8IVN8 264 aa9.94□□□□□ -0.82
VAPA-202ENST00000400000 TRBV30A0A0K0K1B3 111 aa9.94□□□□□ -0.82
VAPA-202ENST00000400000 SERP2Q8N6R1 65 aa9.93□□□□□ -0.82
VAPA-202ENST00000400000 TRBV10-3A0A0K0K1G6 114 aa9.93□□□□□ -0.82
VAPA-202ENST00000400000 FAM19A3Q7Z5A8 133 aa9.93□□□□□ -0.82
VAPA-202ENST00000400000 SOSTDC1Q6X4U4 206 aa9.93□□□□□ -0.82
VAPA-202ENST00000400000 FAM240AA0A1B0GVK7 77 aa9.93□□□□□ -0.82
VAPA-202ENST00000400000 CDC42SE2Q9NRR3 84 aa9.93□□□□□ -0.82
VAPA-202ENST00000400000 UQCRQO14949 82 aa9.93□□□□□ -0.82
VAPA-202ENST00000400000 ZNF580Q9UK33 172 aa9.93□□□□□ -0.82
VAPA-202ENST00000400000 IGLV1-40P01703 118 aa9.93□□□□□ -0.82
VAPA-202ENST00000400000 AGRNO00468 2067 aa9.92□□□□□ -0.82
VAPA-202ENST00000400000 PIEZO2Q9H5I5 2752 aa9.92□□□□□ -0.82
VAPA-202ENST00000400000 MRPL55Q7Z7F7 128 aaKnown RBP9.92□□□□□ -0.82
VAPA-202ENST00000400000 A0A087WYN8 130 aa9.92□□□□□ -0.82
VAPA-202ENST00000400000 CCDC179H3BU77 68 aa9.92□□□□□ -0.82
VAPA-202ENST00000400000 ODF3L2Q3SX64 289 aa9.91□□□□□ -0.82
VAPA-202ENST00000400000 PYGO1Q9Y3Y4 419 aa9.91□□□□□ -0.82
VAPA-202ENST00000400000 C1orf134Q5TEV5 83 aa9.91□□□□□ -0.82
VAPA-202ENST00000400000 Q8N6K4 173 aa9.91□□□□□ -0.82
VAPA-202ENST00000400000 LINC00208Q96KT6 92 aa9.9□□□□□ -0.82
VAPA-202ENST00000400000 TIMM17BO60830 172 aa9.9□□□□□ -0.82
VAPA-202ENST00000400000 RPL28P46779 137 aaKnown RBP9.9□□□□□ -0.82
VAPA-202ENST00000400000 PRYO14603 147 aa9.9□□□□□ -0.82
VAPA-202ENST00000400000 KLLNB2CW77 178 aa9.9□□□□□ -0.83
VAPA-202ENST00000400000 LINC00474Q9P2X8 69 aa9.9□□□□□ -0.83
VAPA-202ENST00000400000 EP400Q96L91 3159 aa9.9□□□□□ -0.83
VAPA-202ENST00000400000 LINC01547P58512 204 aaPredicted RBP9.89□□□□□ -0.83
VAPA-202ENST00000400000 Q6ZSN1 163 aa9.89□□□□□ -0.83
VAPA-202ENST00000400000 PRLHP81277 87 aa9.89□□□□□ -0.83
VAPA-202ENST00000400000 A0A087WVE0 104 aa9.88□□□□□ -0.83
VAPA-202ENST00000400000 ADAMTS20P59510 1910 aa9.88□□□□□ -0.83
VAPA-202ENST00000400000 BEAN1Q3B7T3 259 aa9.88□□□□□ -0.83
VAPA-202ENST00000400000 Q9BRP9 147 aa9.88□□□□□ -0.83
VAPA-202ENST00000400000 XGP55808 180 aa9.88□□□□□ -0.83
VAPA-202ENST00000400000 TRBV7-6A0A0J9YX20 115 aa9.87□□□□□ -0.83
VAPA-202ENST00000400000 Q9UF83 564 aa9.87□□□□□ -0.83
VAPA-202ENST00000400000 FSHBP01225 129 aa9.87□□□□□ -0.83
VAPA-202ENST00000400000 ANKHD1Q8IWZ3 2542 aaKnown RBP9.87□□□□□ -0.83
VAPA-202ENST00000400000 A0A1W2PPR1 153 aa9.87□□□□□ -0.83
VAPA-202ENST00000400000 LST1O00453 97 aa9.87□□□□□ -0.83
VAPA-202ENST00000400000 C2orf91Q6ZV80 131 aa9.86□□□□□ -0.83
VAPA-202ENST00000400000 Q8IZM0 81 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms