RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 LINC00526Q96FQ7 95 aa8.05□□□□□ -1.12
HPS4-202ENST00000398145 UBE2BP63146 152 aa8.05□□□□□ -1.12
HPS4-202ENST00000398145 C9orf66Q5T8R8 295 aa8.05□□□□□ -1.12
HPS4-202ENST00000398145 UBE2DNLQ8IWF7 75 aa8.05□□□□□ -1.12
HPS4-202ENST00000398145 CHCHD7Q9BUK0 85 aa8.05□□□□□ -1.12
HPS4-202ENST00000398145 CHD7Q9P2D1 2997 aa8.04□□□□□ -1.12
HPS4-202ENST00000398145 RMI2Q96E14 147 aa8.04□□□□□ -1.12
HPS4-202ENST00000398145 RPL28P46779 137 aaKnown RBP8.04□□□□□ -1.12
HPS4-202ENST00000398145 BRI3O95415 125 aa8.03□□□□□ -1.12
HPS4-202ENST00000398145 CHD8Q9HCK8 2581 aa8.03□□□□□ -1.12
HPS4-202ENST00000398145 BPY2O14599 106 aa8.03□□□□□ -1.12
HPS4-202ENST00000398145 C5orf42Q9H799 3197 aa8.03□□□□□ -1.12
HPS4-202ENST00000398145 BRK1Q8WUW1 75 aa8.02□□□□□ -1.13
HPS4-202ENST00000398145 ZNF702PQ9H963 129 aa8.02□□□□□ -1.13
HPS4-202ENST00000398145 SPTBN4Q9H254 2564 aa8.02□□□□□ -1.13
HPS4-202ENST00000398145 DNAJC9-AS1A6NH13 148 aa8.01□□□□□ -1.13
HPS4-202ENST00000398145 MP68P56378 58 aa8.01□□□□□ -1.13
HPS4-202ENST00000398145 LINC00315P59091 139 aa8.01□□□□□ -1.13
HPS4-202ENST00000398145 JMJD1CQ15652 2540 aa8.01□□□□□ -1.13
HPS4-202ENST00000398145 COX6A2Q02221 97 aa8.01□□□□□ -1.13
HPS4-202ENST00000398145 DEFB121Q5J5C9 76 aa8.01□□□□□ -1.13
HPS4-202ENST00000398145 PRORYQ9H606 182 aa8.01□□□□□ -1.13
HPS4-202ENST00000398145 LINC00959A0A1B0GUT2 108 aa8.01□□□□□ -1.13
HPS4-202ENST00000398145 SCXQ7RTU7 201 aa8.01□□□□□ -1.13
HPS4-202ENST00000398145 FAM110AQ9BQ89 295 aa8.01□□□□□ -1.13
HPS4-202ENST00000398145 ZFYVE26Q68DK2 2539 aa8.01□□□□□ -1.13
HPS4-202ENST00000398145 LOC100131303A0A0U1RQF7 123 aa8.01□□□□□ -1.13
HPS4-202ENST00000398145 LAMA3Q16787 3333 aa8.01□□□□□ -1.13
HPS4-202ENST00000398145 Q6ZQY7 126 aa8□□□□□ -1.13
HPS4-202ENST00000398145 IGHV4-31P0DP07 118 aa8□□□□□ -1.13
HPS4-202ENST00000398145 WFDC11Q8NEX6 87 aa8□□□□□ -1.13
HPS4-202ENST00000398145 CSDC2Q9Y534 153 aaKnown RBP8□□□□□ -1.13
HPS4-202ENST00000398145 TRBV7-7A0A0K0K1E9 115 aa7.99□□□□□ -1.13
HPS4-202ENST00000398145 A0A087WVE0 104 aa7.99□□□□□ -1.13
HPS4-202ENST00000398145 SMIM9A6NGZ8 99 aa7.99□□□□□ -1.13
HPS4-202ENST00000398145 AVPP01185 164 aa7.99□□□□□ -1.13
HPS4-202ENST00000398145 CD164L2Q6UWJ8 174 aa7.99□□□□□ -1.13
HPS4-202ENST00000398145 XAGE1AQ9HD64 81 aa7.99□□□□□ -1.13
HPS4-202ENST00000398145 C18orf65Q6ZTR6 163 aa7.99□□□□□ -1.13
HPS4-202ENST00000398145 SBSPONQ8IVN8 264 aa7.99□□□□□ -1.13
HPS4-202ENST00000398145 WFDC9Q8NEX5 89 aa7.99□□□□□ -1.13
HPS4-202ENST00000398145 MTORP42345 2549 aa7.99□□□□□ -1.13
HPS4-202ENST00000398145 A0A1W2PPR1 153 aa7.99□□□□□ -1.13
HPS4-202ENST00000398145 DOPEY1Q5JWR5 2465 aa7.98□□□□□ -1.13
HPS4-202ENST00000398145 LYRM9A8MSI8 78 aa7.98□□□□□ -1.13
HPS4-202ENST00000398145 NDUFC1O43677 76 aa7.98□□□□□ -1.13
HPS4-202ENST00000398145 CCKP06307 115 aa7.98□□□□□ -1.13
HPS4-202ENST00000398145 PRB2P02812 416 aaPredicted RBP7.98□□□□□ -1.13
HPS4-202ENST00000398145 SVIPQ8NHG7 77 aa7.98□□□□□ -1.13
HPS4-202ENST00000398145 LRRK2Q5S007 2527 aa7.98□□□□□ -1.13
HPS4-202ENST00000398145 Q8IZM0 81 aa7.97□□□□□ -1.13
HPS4-202ENST00000398145 ODF3L2Q3SX64 289 aa7.97□□□□□ -1.13
HPS4-202ENST00000398145 Q6ZSN1 163 aa7.97□□□□□ -1.13
HPS4-202ENST00000398145 A0A087WYN8 130 aa7.96□□□□□ -1.13
HPS4-202ENST00000398145 NDUFC2-KCTD14E9PQ53 114 aa7.96□□□□□ -1.13
HPS4-202ENST00000398145 SNURFQ9Y675 71 aa7.96□□□□□ -1.13
HPS4-202ENST00000398145 A0A087WZ39 114 aa7.96□□□□□ -1.14
HPS4-202ENST00000398145 BEAN1Q3B7T3 259 aa7.95□□□□□ -1.14
HPS4-202ENST00000398145 MPLKIPQ8TAP9 179 aa7.95□□□□□ -1.14
HPS4-202ENST00000398145 BBC3Q96PG8 261 aaPredicted RBP7.95□□□□□ -1.14
HPS4-202ENST00000398145 KLK5Q9Y337 293 aaPredicted RBP7.95□□□□□ -1.14
HPS4-202ENST00000398145 NTM-AS1Q6ZSK4 140 aa7.95□□□□□ -1.14
HPS4-202ENST00000398145 LAMA2P24043 3122 aaKnown RBP7.95□□□□□ -1.14
HPS4-202ENST00000398145 COX17Q14061 63 aa7.95□□□□□ -1.14
HPS4-202ENST00000398145 FAM19A4Q96LR4 140 aa7.95□□□□□ -1.14
HPS4-202ENST00000398145 HTTP42858 3142 aa7.94□□□□□ -1.14
HPS4-202ENST00000398145 WFDC10AQ9H1F0 79 aa7.94□□□□□ -1.14
HPS4-202ENST00000398145 FAM19A5Q7Z5A7 132 aaPredicted RBP7.94□□□□□ -1.14
HPS4-202ENST00000398145 ATP5EP56381 51 aaPredicted RBP7.94□□□□□ -1.14
HPS4-202ENST00000398145 POLQO75417 2590 aa7.94□□□□□ -1.14
HPS4-202ENST00000398145 Q8N814 137 aa7.93□□□□□ -1.14
HPS4-202ENST00000398145 LINC00846Q9NV44 126 aa7.93□□□□□ -1.14
HPS4-202ENST00000398145 C1orf158Q8N1D5 194 aa7.93□□□□□ -1.14
HPS4-202ENST00000398145 IGLV4-60A0A075B6I1 120 aa7.92□□□□□ -1.14
HPS4-202ENST00000398145 TRAV7A0A075B6U4 112 aa7.92□□□□□ -1.14
HPS4-202ENST00000398145 IGLV5-39A0A0G2JS06 123 aa7.92□□□□□ -1.14
HPS4-202ENST00000398145 HRCT1Q6UXD1 115 aa7.92□□□□□ -1.14
HPS4-202ENST00000398145 FAM19A3Q7Z5A8 133 aa7.92□□□□□ -1.14
HPS4-202ENST00000398145 LINC00337Q8N6G1 96 aa7.92□□□□□ -1.14
HPS4-202ENST00000398145 NDUFB1O75438 58 aa7.91□□□□□ -1.14
HPS4-202ENST00000398145 MUC7Q8TAX7 377 aa7.91□□□□□ -1.14
HPS4-202ENST00000398145 PKIGQ9Y2B9 76 aa7.91□□□□□ -1.14
HPS4-202ENST00000398145 Q8N2B8 174 aa7.91□□□□□ -1.14
HPS4-202ENST00000398145 SMIM26A0A096LP01 95 aa7.9□□□□□ -1.14
HPS4-202ENST00000398145 LOC107984640A0A0U1RRK4 108 aa7.9□□□□□ -1.14
HPS4-202ENST00000398145 NDUFS5O43920 106 aa7.9□□□□□ -1.14
HPS4-202ENST00000398145 PPDPFQ9H3Y8 114 aa7.9□□□□□ -1.14
HPS4-202ENST00000398145 MUC4Q99102 2169 aa7.9□□□□□ -1.15
HPS4-202ENST00000398145 SHISA2Q6UWI4 295 aa7.9□□□□□ -1.15
HPS4-202ENST00000398145 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.9□□□□□ -1.15
HPS4-202ENST00000398145 MKI67P46013 3256 aaKnown RBP7.9□□□□□ -1.15
HPS4-202ENST00000398145 C3orf84H3BNL1 204 aa7.9□□□□□ -1.15
HPS4-202ENST00000398145 J3QKU1 62 aa7.9□□□□□ -1.15
HPS4-202ENST00000398145 PRR3P79522 188 aaKnown RBP7.9□□□□□ -1.15
HPS4-202ENST00000398145 ZNF73O43830 326 aaPredicted RBP7.89□□□□□ -1.15
HPS4-202ENST00000398145 A0A0U1RQV1 116 aa7.89□□□□□ -1.15
HPS4-202ENST00000398145 LINC00482Q8N8I6 264 aa7.88□□□□□ -1.15
HPS4-202ENST00000398145 PCSK5Q92824 1860 aa7.88□□□□□ -1.15
HPS4-202ENST00000398145 CYSRT1A8MQ03 144 aa7.88□□□□□ -1.15
HPS4-202ENST00000398145 SERP1Q9Y6X1 66 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms