RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 G3V4G9 280 aa8.26□□□□□ -1.09
TTC28-201ENST00000397906 PLXNB1O43157 2135 aa8.25□□□□□ -1.09
TTC28-201ENST00000397906 CPAMD8Q8IZJ3 1885 aa8.25□□□□□ -1.09
TTC28-201ENST00000397906 C9orf116Q5BN46 136 aaPredicted RBP8.25□□□□□ -1.09
TTC28-201ENST00000397906 TRIAP1O43715 76 aa8.25□□□□□ -1.09
TTC28-201ENST00000397906 CYSRT1A8MQ03 144 aa8.24□□□□□ -1.09
TTC28-201ENST00000397906 TRBV27A0A0K0K1C4 114 aa8.24□□□□□ -1.09
TTC28-201ENST00000397906 Q6ZQY7 126 aa8.24□□□□□ -1.09
TTC28-201ENST00000397906 SPATA12Q7Z6I5 190 aa8.24□□□□□ -1.09
TTC28-201ENST00000397906 MAPKAPK5-AS1Q8N8E1 139 aa8.24□□□□□ -1.09
TTC28-201ENST00000397906 WFDC13Q8IUB5 93 aa8.24□□□□□ -1.09
TTC28-201ENST00000397906 C6orf223Q8N319 242 aa8.24□□□□□ -1.09
TTC28-201ENST00000397906 IGLV1-51P01701 117 aa8.24□□□□□ -1.09
TTC28-201ENST00000397906 GAS8-AS1O95177 125 aa8.23□□□□□ -1.09
TTC28-201ENST00000397906 DHRS4-AS1Q9P1J3 65 aa8.23□□□□□ -1.09
TTC28-201ENST00000397906 NRACQ8N912 160 aa8.23□□□□□ -1.09
TTC28-201ENST00000397906 C3orf22Q8N5N4 141 aa8.22□□□□□ -1.09
TTC28-201ENST00000397906 C1orf134Q5TEV5 83 aa8.22□□□□□ -1.09
TTC28-201ENST00000397906 PIEZO2Q9H5I5 2752 aa8.22□□□□□ -1.09
TTC28-201ENST00000397906 SMIM20Q8N5G0 67 aa8.22□□□□□ -1.09
TTC28-201ENST00000397906 CRIP2P52943 208 aaPredicted RBP8.21□□□□□ -1.1
TTC28-201ENST00000397906 MPLKIPQ8TAP9 179 aa8.21□□□□□ -1.1
TTC28-201ENST00000397906 RETNLBQ9BQ08 111 aa8.21□□□□□ -1.1
TTC28-201ENST00000397906 ATRXP46100 2492 aa8.21□□□□□ -1.1
TTC28-201ENST00000397906 ZNF73O43830 326 aaPredicted RBP8.2□□□□□ -1.1
TTC28-201ENST00000397906 SMIM11BQ8TCY0 68 aa8.2□□□□□ -1.1
TTC28-201ENST00000397906 UNQ6190/PRO20217Q6UXQ8 127 aa8.2□□□□□ -1.1
TTC28-201ENST00000397906 SVIPQ8NHG7 77 aa8.2□□□□□ -1.1
TTC28-201ENST00000397906 C10orf25Q5T742 122 aa8.2□□□□□ -1.1
TTC28-201ENST00000397906 PYGO1Q9Y3Y4 419 aa8.2□□□□□ -1.1
TTC28-201ENST00000397906 IGF2RP11717 2491 aa8.2□□□□□ -1.1
TTC28-201ENST00000397906 LINC01556Q5JQF7 62 aa8.2□□□□□ -1.1
TTC28-201ENST00000397906 C16orf95Q9H693 158 aa8.19□□□□□ -1.1
TTC28-201ENST00000397906 C1orf137Q5JT78 98 aa8.19□□□□□ -1.1
TTC28-201ENST00000397906 FSHBP01225 129 aa8.18□□□□□ -1.1
TTC28-201ENST00000397906 REG3GQ6UW15 175 aa8.18□□□□□ -1.1
TTC28-201ENST00000397906 TET2Q6N021 2002 aaPredicted RBP8.18□□□□□ -1.1
TTC28-201ENST00000397906 RPL28P46779 137 aaKnown RBP8.18□□□□□ -1.1
TTC28-201ENST00000397906 COX17Q14061 63 aa8.18□□□□□ -1.1
TTC28-201ENST00000397906 SPTSSBQ8NFR3 76 aa8.18□□□□□ -1.1
TTC28-201ENST00000397906 CDC42SE2Q9NRR3 84 aa8.18□□□□□ -1.1
TTC28-201ENST00000397906 NCOR2Q9Y618 2525 aa8.18□□□□□ -1.1
TTC28-201ENST00000397906 CCDC168Q8NDH2 2452 aa8.18□□□□□ -1.1
TTC28-201ENST00000397906 ABCA2Q9BZC7 2435 aa8.18□□□□□ -1.1
TTC28-201ENST00000397906 PRR3P79522 188 aaKnown RBP8.18□□□□□ -1.1
TTC28-201ENST00000397906 C20orf197Q8N268 126 aa8.17□□□□□ -1.1
TTC28-201ENST00000397906 LINC00643Q86TS7 51 aa8.17□□□□□ -1.1
TTC28-201ENST00000397906 IGLV4-60A0A075B6I1 120 aa8.16□□□□□ -1.1
TTC28-201ENST00000397906 FHL2Q14192 279 aa8.16□□□□□ -1.1
TTC28-201ENST00000397906 COX6A2Q02221 97 aa8.16□□□□□ -1.1
TTC28-201ENST00000397906 X6R8D5 127 aa8.16□□□□□ -1.1
TTC28-201ENST00000397906 CACNA1AO00555 2505 aa8.16□□□□□ -1.1
TTC28-201ENST00000397906 Q8IZM0 81 aa8.16□□□□□ -1.1
TTC28-201ENST00000397906 EML5Q05BV3 1969 aa8.15□□□□□ -1.1
TTC28-201ENST00000397906 MRPS36P82909 103 aaKnown RBP8.15□□□□□ -1.1
TTC28-201ENST00000397906 NAV2Q8IVL1 2488 aa8.15□□□□□ -1.1
TTC28-201ENST00000397906 PRR4Q16378 134 aa8.15□□□□□ -1.1
TTC28-201ENST00000397906 BRK1Q8WUW1 75 aa8.15□□□□□ -1.1
TTC28-201ENST00000397906 FAM30AQ9NZY2 134 aa8.15□□□□□ -1.11
TTC28-201ENST00000397906 POM121L12Q8N7R1 296 aa8.15□□□□□ -1.11
TTC28-201ENST00000397906 NAV3Q8IVL0 2385 aa8.14□□□□□ -1.11
TTC28-201ENST00000397906 RNASE8Q8TDE3 154 aaKnown RBP8.14□□□□□ -1.11
TTC28-201ENST00000397906 LINC00694P0DN24 101 aa8.14□□□□□ -1.11
TTC28-201ENST00000397906 SNURFQ9Y675 71 aa8.13□□□□□ -1.11
TTC28-201ENST00000397906 TRBV30A0A0K0K1B3 111 aa8.13□□□□□ -1.11
TTC28-201ENST00000397906 TRBV10-3A0A0K0K1G6 114 aa8.13□□□□□ -1.11
TTC28-201ENST00000397906 ESRGQ1W209 222 aa8.13□□□□□ -1.11
TTC28-201ENST00000397906 POLR2KP53803 58 aaKnown RBP8.13□□□□□ -1.11
TTC28-201ENST00000397906 IGHV6-1A0A0B4J1U7 121 aa8.12□□□□□ -1.11
TTC28-201ENST00000397906 J3KT08 172 aa8.12□□□□□ -1.11
TTC28-201ENST00000397906 Q6ZVQ6 151 aa8.12□□□□□ -1.11
TTC28-201ENST00000397906 LYPD5Q6UWN5 251 aa8.12□□□□□ -1.11
TTC28-201ENST00000397906 MT-ATP8P03928 68 aa8.12□□□□□ -1.11
TTC28-201ENST00000397906 FAM236DA0A1B0GTK5 79 aa8.12□□□□□ -1.11
TTC28-201ENST00000397906 NDUFC2O95298 119 aa8.12□□□□□ -1.11
TTC28-201ENST00000397906 FAM236CP0DP71 79 aa8.12□□□□□ -1.11
TTC28-201ENST00000397906 K7ERS5 55 aa8.11□□□□□ -1.11
TTC28-201ENST00000397906 FHL3Q13643 280 aa8.11□□□□□ -1.11
TTC28-201ENST00000397906 MDFIQ99750 246 aa8.11□□□□□ -1.11
TTC28-201ENST00000397906 CELA1Q9UNI1 258 aa8.11□□□□□ -1.11
TTC28-201ENST00000397906 NDUFV3P56181 108 aaKnown RBP8.1□□□□□ -1.11
TTC28-201ENST00000397906 CHCHD7Q9BUK0 85 aa8.1□□□□□ -1.11
TTC28-201ENST00000397906 Q6ZSN1 163 aa8.1□□□□□ -1.11
TTC28-201ENST00000397906 MRPS12O15235 138 aaKnown RBP8.1□□□□□ -1.11
TTC28-201ENST00000397906 TIMM17BO60830 172 aa8.1□□□□□ -1.11
TTC28-201ENST00000397906 LINC00242Q5T6M2 205 aa8.1□□□□□ -1.11
TTC28-201ENST00000397906 AGRNO00468 2067 aa8.1□□□□□ -1.11
TTC28-201ENST00000397906 EGFEM1PQ0D2K5 195 aa8.1□□□□□ -1.11
TTC28-201ENST00000397906 NHLRC4P0CG21 123 aaPredicted RBP8.09□□□□□ -1.11
TTC28-201ENST00000397906 MRPL55Q7Z7F7 128 aaKnown RBP8.08□□□□□ -1.12
TTC28-201ENST00000397906 SMIM1B2RUZ4 78 aa8.08□□□□□ -1.12
TTC28-201ENST00000397906 C10orf142B7Z368 130 aa8.08□□□□□ -1.12
TTC28-201ENST00000397906 DEFB116Q30KQ4 102 aa8.08□□□□□ -1.12
TTC28-201ENST00000397906 Q9BRP9 147 aa8.07□□□□□ -1.12
TTC28-201ENST00000397906 Q8N9L7 120 aa8.07□□□□□ -1.12
TTC28-201ENST00000397906 WDR87Q6ZQQ6 2873 aa8.07□□□□□ -1.12
TTC28-201ENST00000397906 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.07□□□□□ -1.12
TTC28-201ENST00000397906 PRR15LQ9BU68 103 aa8.07□□□□□ -1.12
TTC28-201ENST00000397906 SERP1Q9Y6X1 66 aa8.06□□□□□ -1.12
TTC28-201ENST00000397906 LST1O00453 97 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms