RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 ZNF469Q96JG9 3925 aaPredicted RBP7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 TRIAP1O43715 76 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 LY6G6DO95868 133 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 RNASE1P07998 156 aaKnown RBP7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 PIK3CD-AS1Q5SR53 167 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 NTM-AS1Q6ZSK4 140 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 DAZ2Q13117 558 aaKnown RBP7.46□□□□□ -1.21
CPSF1P1-201ENST00000397477 LINC00242Q5T6M2 205 aa7.46□□□□□ -1.21
CPSF1P1-201ENST00000397477 DAZ4Q86SG3 579 aaKnown RBP7.46□□□□□ -1.21
CPSF1P1-201ENST00000397477 DAZ3Q9NR90 486 aaKnown RBP7.46□□□□□ -1.21
CPSF1P1-201ENST00000397477 EIF4EBP3O60516 100 aaPredicted RBP7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 MT-ATP8P03928 68 aa7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 BEAN1Q3B7T3 259 aa7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 C6orf226Q5I0X4 101 aa7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 ICOSQ9Y6W8 199 aa7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 SMCPP49901 116 aaPredicted RBP7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 CMC4P56277 68 aaPredicted RBP7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 MIAQ16674 131 aa7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 PPDPFLQ8WWR9 84 aa7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 PAX4O43316 350 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 F5H768 121 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 IGLV1-51P01701 117 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 HILS1P60008 231 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 FHL3Q13643 280 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 LINC01620Q4KN68 170 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 TEN1Q86WV5 123 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 CITED1Q99966 193 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 IGLV4-60A0A075B6I1 120 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 TTC32Q5I0X7 151 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 TRBV10-1A0A0K0K1A3 114 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 UBE2D3P61077 147 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 UBE2D2P62837 147 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 C3orf56Q8N813 242 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 TEX49A0A1B0GTD5 131 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 ZFAND6Q6FIF0 208 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 CARD19Q96LW7 228 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 PRO0461Q9UI25 63 aa7.42□□□□□ -1.22
CPSF1P1-201ENST00000397477 FAM222AQ5U5X8 452 aa7.42□□□□□ -1.22
CPSF1P1-201ENST00000397477 ATP6V0E2Q8NHE4 81 aa7.42□□□□□ -1.22
CPSF1P1-201ENST00000397477 CDC42SE2Q9NRR3 84 aa7.42□□□□□ -1.22
CPSF1P1-201ENST00000397477 MIR7-3HGQ8N6C7 128 aa7.42□□□□□ -1.22
CPSF1P1-201ENST00000397477 FAM104AQ969W3 186 aa7.42□□□□□ -1.22
CPSF1P1-201ENST00000397477 A0A0B4J2C4 111 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 LINC00308Q8TCZ7 52 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 ANGP03950 147 aaKnown RBP7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 GIG44P09565 113 aaPredicted RBP7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 NOTCH1P46531 2555 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 DAD1P61803 113 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 KRTAP1-1Q07627 177 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 SPATA3Q8NHX4 192 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 CRPP02741 224 aa7.4□□□□□ -1.22
CPSF1P1-201ENST00000397477 MALP21145 153 aa7.4□□□□□ -1.22
CPSF1P1-201ENST00000397477 VWFP04275 2813 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 TRBV6-8A0A0A6YYG3 113 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 TRAV8-4A0A0B4J246 113 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 SNCGO76070 127 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 TIRAPP58753 221 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 COX7B2Q8TF08 81 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 SPATA25Q9BR10 227 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 NDUFA1O15239 70 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 GAGE2BQ13066 116 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 GAGE2EQ4V326 116 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 UBE2WQ96B02 151 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 GAGE2DQ9UEU5 116 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 A8MTW9 85 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 XGP55808 180 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 Q9HAA7 133 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 STAB1Q9NY15 2570 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 FHL2Q14192 279 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 LINC00526Q96FQ7 95 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 DNAL4O96015 105 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 KRTAP10-3P60369 221 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 TRBV6-4A0A1B0GX49 114 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 SS18Q15532 418 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 LITAFQ99732 161 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 SND1-IT1Q9HBX3 110 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 HIVEP1P15822 2718 aa7.37□□□□□ -1.23
CPSF1P1-201ENST00000397477 LINC00269Q8N2A0 174 aa7.37□□□□□ -1.23
CPSF1P1-201ENST00000397477 IFITM1P13164 125 aa7.37□□□□□ -1.23
CPSF1P1-201ENST00000397477 Q8N3U1 123 aa7.37□□□□□ -1.23
CPSF1P1-201ENST00000397477 COPS9Q8WXC6 57 aa7.36□□□□□ -1.23
CPSF1P1-201ENST00000397477 SPANXDQ9BXN6 97 aa7.36□□□□□ -1.23
CPSF1P1-201ENST00000397477 SPANXCQ9NY87 97 aa7.36□□□□□ -1.23
CPSF1P1-201ENST00000397477 ATP5G1P05496 136 aa7.36□□□□□ -1.23
CPSF1P1-201ENST00000397477 C16orf95Q9H693 158 aa7.36□□□□□ -1.23
CPSF1P1-201ENST00000397477 TENM1Q9UKZ4 2725 aa7.36□□□□□ -1.23
CPSF1P1-201ENST00000397477 TRBV10-2A0A0K0K1G8 114 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 SOSTDC1Q6X4U4 206 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 PRO0255Q9UI72 69 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 C9orf66Q5T8R8 295 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 FAM110AQ9BQ89 295 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 C19orf73Q9NVV2 129 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 OTOGQ6ZRI0 2925 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 NSD1Q96L73 2696 aaPredicted RBP7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 TRBV30A0A0K0K1B3 111 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 PLAC8L1A1L4L8 177 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 EDA2RQ9HAV5 297 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 H7C423 109 aa7.34□□□□□ -1.23
CPSF1P1-201ENST00000397477 IGHV4-28A0A0C4DH34 117 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms