RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 DEFB121Q5J5C9 76 aa7.08□□□□□ -1.28
TRIM39-203ENST00000396547 C11orf68Q9H3H3 251 aaKnown RBP7.08□□□□□ -1.28
TRIM39-203ENST00000396547 ANKRD17O75179 2603 aaKnown RBP7.08□□□□□ -1.28
TRIM39-203ENST00000396547 RBMY1BA6NDE4 496 aaKnown RBP7.08□□□□□ -1.28
TRIM39-203ENST00000396547 RBMY1EA6NEQ0 496 aaKnown RBP7.08□□□□□ -1.28
TRIM39-203ENST00000396547 RBMY1DP0C7P1 496 aaKnown RBP7.08□□□□□ -1.28
TRIM39-203ENST00000396547 PSMB8P28062 276 aa7.08□□□□□ -1.28
TRIM39-203ENST00000396547 ZNF415Q09FC8 603 aa7.08□□□□□ -1.28
TRIM39-203ENST00000396547 OR13C6PQ8NH95 151 aa7.08□□□□□ -1.28
TRIM39-203ENST00000396547 SONP18583 2426 aaKnown RBP7.08□□□□□ -1.28
TRIM39-203ENST00000396547 DNAL4O96015 105 aa7.08□□□□□ -1.28
TRIM39-203ENST00000396547 SLPIP03973 132 aa7.08□□□□□ -1.28
TRIM39-203ENST00000396547 ACYP1P07311 99 aa7.08□□□□□ -1.28
TRIM39-203ENST00000396547 A0A087WVE0 104 aa7.07□□□□□ -1.28
TRIM39-203ENST00000396547 LINC00158P58513 81 aa7.07□□□□□ -1.28
TRIM39-203ENST00000396547 LINC01600Q96MT4 127 aa7.07□□□□□ -1.28
TRIM39-203ENST00000396547 CCDC168Q8NDH2 2452 aa7.07□□□□□ -1.28
TRIM39-203ENST00000396547 PFN2P35080 140 aa7.07□□□□□ -1.28
TRIM39-203ENST00000396547 C9orf129Q5T035 196 aaKnown RBP7.07□□□□□ -1.28
TRIM39-203ENST00000396547 SMIM1B2RUZ4 78 aa7.06□□□□□ -1.28
TRIM39-203ENST00000396547 UQCRQO14949 82 aa7.06□□□□□ -1.28
TRIM39-203ENST00000396547 TIMM17BO60830 172 aa7.06□□□□□ -1.28
TRIM39-203ENST00000396547 MSMBP08118 114 aa7.06□□□□□ -1.28
TRIM39-203ENST00000396547 CRPP02741 224 aa7.06□□□□□ -1.28
TRIM39-203ENST00000396547 MALP21145 153 aa7.06□□□□□ -1.28
TRIM39-203ENST00000396547 MIR7-3HGQ8N6C7 128 aa7.06□□□□□ -1.28
TRIM39-203ENST00000396547 FN1P02751 2386 aaKnown RBP7.05□□□□□ -1.28
TRIM39-203ENST00000396547 F5H768 121 aa7.05□□□□□ -1.28
TRIM39-203ENST00000396547 RNASE1P07998 156 aaKnown RBP7.05□□□□□ -1.28
TRIM39-203ENST00000396547 C11orf44Q8N8P7 122 aa7.05□□□□□ -1.28
TRIM39-203ENST00000396547 A0A1B0GX51 115 aa7.05□□□□□ -1.28
TRIM39-203ENST00000396547 DNAJC30Q96LL9 226 aa7.05□□□□□ -1.28
TRIM39-203ENST00000396547 NOTCH2Q04721 2471 aa7.05□□□□□ -1.28
TRIM39-203ENST00000396547 NAV2Q8IVL1 2488 aa7.04□□□□□ -1.28
TRIM39-203ENST00000396547 OTOGQ6ZRI0 2925 aa7.04□□□□□ -1.28
TRIM39-203ENST00000396547 SETXQ7Z333 2677 aaKnown RBP7.04□□□□□ -1.28
TRIM39-203ENST00000396547 A0A087WYN8 130 aa7.04□□□□□ -1.28
TRIM39-203ENST00000396547 HIST1H4AP62805 103 aaKnown RBP7.04□□□□□ -1.28
TRIM39-203ENST00000396547 FAM19A5Q7Z5A7 132 aaPredicted RBP7.04□□□□□ -1.28
TRIM39-203ENST00000396547 NCR3O14931 201 aa7.04□□□□□ -1.28
TRIM39-203ENST00000396547 C10orf105Q8TEF2 133 aa7.04□□□□□ -1.28
TRIM39-203ENST00000396547 DYNLRB2Q8TF09 96 aa7.04□□□□□ -1.28
TRIM39-203ENST00000396547 IMUPQ9GZP8 106 aa7.04□□□□□ -1.28
TRIM39-203ENST00000396547 SND1-IT1Q9HBX3 110 aa7.04□□□□□ -1.28
TRIM39-203ENST00000396547 PEMTQ9UBM1 199 aa7.04□□□□□ -1.28
TRIM39-203ENST00000396547 CR1P17927 2039 aa7.04□□□□□ -1.28
TRIM39-203ENST00000396547 UBE2L6O14933 153 aa7.04□□□□□ -1.28
TRIM39-203ENST00000396547 CYSTM1Q9H1C7 97 aa7.04□□□□□ -1.28
TRIM39-203ENST00000396547 TRACP01848 142 aa7.03□□□□□ -1.28
TRIM39-203ENST00000396547 INAFM2P0DMQ5 153 aa7.03□□□□□ -1.28
TRIM39-203ENST00000396547 LINC00337Q8N6G1 96 aa7.03□□□□□ -1.28
TRIM39-203ENST00000396547 LINC00526Q96FQ7 95 aa7.03□□□□□ -1.28
TRIM39-203ENST00000396547 Q96MF0 132 aa7.03□□□□□ -1.28
TRIM39-203ENST00000396547 C22orf24Q9Y442 160 aa7.03□□□□□ -1.28
TRIM39-203ENST00000396547 LECT2O14960 151 aa7.03□□□□□ -1.28
TRIM39-203ENST00000396547 PAX4O43316 350 aa7.03□□□□□ -1.28
TRIM39-203ENST00000396547 COX7CP15954 63 aa7.03□□□□□ -1.28
TRIM39-203ENST00000396547 KRTAP1-1Q07627 177 aa7.03□□□□□ -1.28
TRIM39-203ENST00000396547 WFDC9Q8NEX5 89 aa7.02□□□□□ -1.29
TRIM39-203ENST00000396547 KIR2DL5BQ8NHK3 375 aa7.02□□□□□ -1.29
TRIM39-203ENST00000396547 IGLV5-39A0A0G2JS06 123 aa7.02□□□□□ -1.29
TRIM39-203ENST00000396547 RPL36AP83881 106 aaKnown RBP7.02□□□□□ -1.29
TRIM39-203ENST00000396547 NTM-AS1Q6ZSK4 140 aa7.02□□□□□ -1.29
TRIM39-203ENST00000396547 Q6ZTI0 123 aa7.02□□□□□ -1.29
TRIM39-203ENST00000396547 SMIM11BQ8TCY0 68 aa7.02□□□□□ -1.29
TRIM39-203ENST00000396547 COPS9Q8WXC6 57 aa7.02□□□□□ -1.29
TRIM39-203ENST00000396547 RPL36ALQ969Q0 106 aaKnown RBP7.02□□□□□ -1.29
TRIM39-203ENST00000396547 MXRA5Q9NR99 2828 aa7.02□□□□□ -1.29
TRIM39-203ENST00000396547 F8WDY8 70 aa7.02□□□□□ -1.29
TRIM39-203ENST00000396547 BEAN1Q3B7T3 259 aa7.02□□□□□ -1.29
TRIM39-203ENST00000396547 C5orf38Q86SI9 138 aa7.02□□□□□ -1.29
TRIM39-203ENST00000396547 ANK3Q12955 4377 aaKnown RBP7.01□□□□□ -1.29
TRIM39-203ENST00000396547 LOC100131303A0A0U1RQF7 123 aa7.01□□□□□ -1.29
TRIM39-203ENST00000396547 LINC00846Q9NV44 126 aa7.01□□□□□ -1.29
TRIM39-203ENST00000396547 FLNBO75369 2602 aaKnown RBP7.01□□□□□ -1.29
TRIM39-203ENST00000396547 IGLV5-45A0A087WSX0 123 aa7□□□□□ -1.29
TRIM39-203ENST00000396547 A0A1W2PRX2 142 aa7□□□□□ -1.29
TRIM39-203ENST00000396547 INSP01308 110 aa7□□□□□ -1.29
TRIM39-203ENST00000396547 C11orf72Q8NBR9 251 aa7□□□□□ -1.29
TRIM39-203ENST00000396547 TRAV13-2A0A0B4J235 113 aa7□□□□□ -1.29
TRIM39-203ENST00000396547 DSCR8Q96T75 97 aa7□□□□□ -1.29
TRIM39-203ENST00000396547 MAP6D1Q9H9H5 199 aa7□□□□□ -1.29
TRIM39-203ENST00000396547 NIPBLQ6KC79 2804 aaeCLIP7□□□□□ -1.29
TRIM39-203ENST00000396547 TMEM89A2RUT3 159 aa7□□□□□ -1.29
TRIM39-203ENST00000396547 J3KT08 172 aa7□□□□□ -1.29
TRIM39-203ENST00000396547 WFDC11Q8NEX6 87 aa7□□□□□ -1.29
TRIM39-203ENST00000396547 TEX15Q9BXT5 2789 aa6.99□□□□□ -1.29
TRIM39-203ENST00000396547 B4DSR2 109 aa6.99□□□□□ -1.29
TRIM39-203ENST00000396547 NOP10Q9NPE3 64 aaKnown RBP6.99□□□□□ -1.29
TRIM39-203ENST00000396547 CDC42SE2Q9NRR3 84 aa6.99□□□□□ -1.29
TRIM39-203ENST00000396547 IGKV2-28A0A075B6P5 120 aa6.99□□□□□ -1.29
TRIM39-203ENST00000396547 ATOX1O00244 68 aa6.99□□□□□ -1.29
TRIM39-203ENST00000396547 IGKV2D-28P01615 120 aa6.99□□□□□ -1.29
TRIM39-203ENST00000396547 COX7B2Q8TF08 81 aa6.99□□□□□ -1.29
TRIM39-203ENST00000396547 TRGV2A0A075B6R0 118 aa6.98□□□□□ -1.29
TRIM39-203ENST00000396547 STHQ8IWL8 128 aa6.98□□□□□ -1.29
TRIM39-203ENST00000396547 C2orf48Q96LS8 159 aa6.98□□□□□ -1.29
TRIM39-203ENST00000396547 ACANP16112 2415 aa6.98□□□□□ -1.29
TRIM39-203ENST00000396547 CCL18P55774 89 aa6.98□□□□□ -1.29
TRIM39-203ENST00000396547 HILS1P60008 231 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms