RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 Q9UF83 564 aa4.97□□□□□ -1.61
RTN4-205ENST00000394609 PLA2G2DQ9UNK4 145 aa4.97□□□□□ -1.61
RTN4-205ENST00000394609 PLAC8L1A1L4L8 177 aa4.96□□□□□ -1.61
RTN4-205ENST00000394609 IGHV3-53P01767 116 aa4.96□□□□□ -1.61
RTN4-205ENST00000394609 CFC1BP0CG36 223 aa4.96□□□□□ -1.61
RTN4-205ENST00000394609 CFC1P0CG37 223 aa4.96□□□□□ -1.61
RTN4-205ENST00000394609 KRTAP10-11P60412 298 aa4.96□□□□□ -1.61
RTN4-205ENST00000394609 C2orf66Q6UXQ4 117 aa4.96□□□□□ -1.61
RTN4-205ENST00000394609 ZFP2Q6ZN57 461 aa4.96□□□□□ -1.61
RTN4-205ENST00000394609 TMEM126AQ9H061 195 aa4.96□□□□□ -1.61
RTN4-205ENST00000394609 NOTCH1P46531 2555 aa4.96□□□□□ -1.61
RTN4-205ENST00000394609 SDHAF1A6NFY7 115 aa4.96□□□□□ -1.62
RTN4-205ENST00000394609 IGHV4-30-4P0DP06 118 aa4.96□□□□□ -1.62
RTN4-205ENST00000394609 PMVKQ15126 192 aa4.96□□□□□ -1.62
RTN4-205ENST00000394609 ATXN8Q156A1 80 aa4.96□□□□□ -1.62
RTN4-205ENST00000394609 DEFB135Q30KP9 77 aa4.96□□□□□ -1.62
RTN4-205ENST00000394609 TTC32Q5I0X7 151 aa4.96□□□□□ -1.62
RTN4-205ENST00000394609 IL17DQ8TAD2 202 aa4.96□□□□□ -1.62
RTN4-205ENST00000394609 PTH2Q96A98 100 aa4.96□□□□□ -1.62
RTN4-205ENST00000394609 C16orf74Q96GX8 76 aa4.96□□□□□ -1.62
RTN4-205ENST00000394609 IMUPQ9GZP8 106 aa4.96□□□□□ -1.62
RTN4-205ENST00000394609 TRBV30A0A0K0K1B3 111 aa4.95□□□□□ -1.62
RTN4-205ENST00000394609 POLR2KP53803 58 aaKnown RBP4.95□□□□□ -1.62
RTN4-205ENST00000394609 DEFB121Q5J5C9 76 aa4.95□□□□□ -1.62
RTN4-205ENST00000394609 PIK3CD-AS1Q5SR53 167 aa4.95□□□□□ -1.62
RTN4-205ENST00000394609 SS18L2Q9UHA2 77 aa4.95□□□□□ -1.62
RTN4-205ENST00000394609 IGLV4-69A0A075B6H9 119 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 TRGV2A0A075B6R0 118 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 TRBV10-2A0A0K0K1G8 114 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 IGIPA6NJ69 53 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 B5MCH6 92 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 H3BT86 120 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 VCYO14598 125 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 RS1O15537 224 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 IGHV3-33P01772 117 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 DAZ2Q13117 558 aaKnown RBP4.94□□□□□ -1.62
RTN4-205ENST00000394609 TRBV6-5A0A0K0K1A5 114 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 DEFB4AO15263 64 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 APOC4P55056 127 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 KIR2DL5BQ8NHK3 375 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 PLEKHB2Q96CS7 222 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 AMELXQ99217 191 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 KRTAP3-1Q9BYR8 98 aa4.94□□□□□ -1.62
RTN4-205ENST00000394609 MGAM2Q2M2H8 2515 aa4.93□□□□□ -1.62
RTN4-205ENST00000394609 TRBV27A0A0K0K1C4 114 aa4.93□□□□□ -1.62
RTN4-205ENST00000394609 TRBV7-7A0A0K0K1E9 115 aa4.93□□□□□ -1.62
RTN4-205ENST00000394609 C9JAW5 83 aa4.93□□□□□ -1.62
RTN4-205ENST00000394609 LEPROTO15243 131 aa4.93□□□□□ -1.62
RTN4-205ENST00000394609 ATP5G1P05496 136 aa4.93□□□□□ -1.62
RTN4-205ENST00000394609 ACYP1P07311 99 aa4.93□□□□□ -1.62
RTN4-205ENST00000394609 DEFB130BP0DP73 79 aa4.93□□□□□ -1.62
RTN4-205ENST00000394609 DEFB130AP0DP74 79 aa4.93□□□□□ -1.62
RTN4-205ENST00000394609 LINC01620Q4KN68 170 aa4.93□□□□□ -1.62
RTN4-205ENST00000394609 KIR2DL4Q99706 377 aa4.93□□□□□ -1.62
RTN4-205ENST00000394609 OVOL2Q9BRP0 275 aa4.93□□□□□ -1.62
RTN4-205ENST00000394609 TNFRSF18Q9Y5U5 241 aa4.93□□□□□ -1.62
RTN4-205ENST00000394609 NBEAL1Q6ZS30 2694 aa4.92□□□□□ -1.62
RTN4-205ENST00000394609 TRAV8-4A0A0B4J246 113 aa4.92□□□□□ -1.62
RTN4-205ENST00000394609 J3QQQ9 107 aa4.92□□□□□ -1.62
RTN4-205ENST00000394609 LGALS3P17931 250 aaKnown RBP4.92□□□□□ -1.62
RTN4-205ENST00000394609 EGFEM1PQ0D2K5 195 aa4.92□□□□□ -1.62
RTN4-205ENST00000394609 TRAV4A0A0B4J268 109 aa4.92□□□□□ -1.62
RTN4-205ENST00000394609 IGHV3-38A0A0C4DH36 116 aa4.92□□□□□ -1.62
RTN4-205ENST00000394609 I3L3M4 83 aa4.92□□□□□ -1.62
RTN4-205ENST00000394609 TSHBP01222 138 aa4.92□□□□□ -1.62
RTN4-205ENST00000394609 RPL39P62891 51 aaKnown RBP4.92□□□□□ -1.62
RTN4-205ENST00000394609 RHOHQ15669 191 aa4.92□□□□□ -1.62
RTN4-205ENST00000394609 TMEM170BQ5T4T1 132 aa4.92□□□□□ -1.62
RTN4-205ENST00000394609 UBE2WQ96B02 151 aa4.92□□□□□ -1.62
RTN4-205ENST00000394609 IGHV4-28A0A0C4DH34 117 aa4.91□□□□□ -1.62
RTN4-205ENST00000394609 PRB2P02812 416 aaPredicted RBP4.91□□□□□ -1.62
RTN4-205ENST00000394609 EDA2RQ9HAV5 297 aa4.91□□□□□ -1.62
RTN4-205ENST00000394609 TP53TG1Q9Y2A0 90 aa4.91□□□□□ -1.62
RTN4-205ENST00000394609 NACAE9PAV3 2078 aa4.91□□□□□ -1.62
RTN4-205ENST00000394609 TRGV4A0A0C4DH28 118 aa4.9□□□□□ -1.62
RTN4-205ENST00000394609 TMEM223A0PJW6 202 aa4.9□□□□□ -1.62
RTN4-205ENST00000394609 A4D1N5 150 aa4.9□□□□□ -1.62
RTN4-205ENST00000394609 SMIM9A6NGZ8 99 aa4.9□□□□□ -1.62
RTN4-205ENST00000394609 COX6CP09669 75 aa4.9□□□□□ -1.62
RTN4-205ENST00000394609 FAM222AQ5U5X8 452 aa4.9□□□□□ -1.62
RTN4-205ENST00000394609 ZNRF2Q8NHG8 242 aa4.9□□□□□ -1.62
RTN4-205ENST00000394609 NTN5Q8WTR8 489 aaPredicted RBP4.9□□□□□ -1.62
RTN4-205ENST00000394609 K7EQD1 137 aa4.9□□□□□ -1.63
RTN4-205ENST00000394609 HERV-K104P63124 156 aa4.9□□□□□ -1.63
RTN4-205ENST00000394609 C15orf53Q8NAA6 179 aa4.9□□□□□ -1.63
RTN4-205ENST00000394609 RETNQ9HD89 108 aa4.9□□□□□ -1.63
RTN4-205ENST00000394609 LOC100131303A0A0U1RQF7 123 aa4.89□□□□□ -1.63
RTN4-205ENST00000394609 CCDC179H3BU77 68 aa4.89□□□□□ -1.63
RTN4-205ENST00000394609 FHL2Q14192 279 aa4.89□□□□□ -1.63
RTN4-205ENST00000394609 Q8NAQ8 132 aa4.89□□□□□ -1.63
RTN4-205ENST00000394609 TMEM101Q96IK0 257 aa4.89□□□□□ -1.63
RTN4-205ENST00000394609 DNAJC30Q96LL9 226 aa4.89□□□□□ -1.63
RTN4-205ENST00000394609 OPRPNQ99935 248 aaPredicted RBP4.89□□□□□ -1.63
RTN4-205ENST00000394609 A0A0J9YXY3 114 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 TIMM17BO60830 172 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 TSPEAR-AS2P59090 65 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 RPL36AP83881 106 aaKnown RBP4.88□□□□□ -1.63
RTN4-205ENST00000394609 SMIM20Q8N5G0 67 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 C20orf203Q8NBC4 194 aa4.88□□□□□ -1.63
RTN4-205ENST00000394609 RPL36ALQ969Q0 106 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms