RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 TRAV25A0A0B4J276 109 aa9.91□□□□□ -0.82
GAPVD1-205ENST00000394084 TRBV10-1A0A0K0K1A3 114 aa9.91□□□□□ -0.82
GAPVD1-205ENST00000394084 TTC32Q5I0X7 151 aa9.91□□□□□ -0.82
GAPVD1-205ENST00000394084 LINC01600Q96MT4 127 aa9.91□□□□□ -0.82
GAPVD1-205ENST00000394084 ESM1Q9NQ30 184 aa9.91□□□□□ -0.82
GAPVD1-205ENST00000394084 WFDC11Q8NEX6 87 aa9.91□□□□□ -0.82
GAPVD1-205ENST00000394084 FLNAP21333 2647 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-205ENST00000394084 F5H768 121 aa9.9□□□□□ -0.82
GAPVD1-205ENST00000394084 ZNF843Q8N446 348 aa9.9□□□□□ -0.82
GAPVD1-205ENST00000394084 ACANP16112 2415 aa9.9□□□□□ -0.82
GAPVD1-205ENST00000394084 TMEM243Q9BU79 118 aa9.89□□□□□ -0.83
GAPVD1-205ENST00000394084 KMT2BQ9UMN6 2715 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-205ENST00000394084 MTORP42345 2549 aa9.89□□□□□ -0.83
GAPVD1-205ENST00000394084 GIG44P09565 113 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-205ENST00000394084 TOMM7Q9P0U1 55 aa9.89□□□□□ -0.83
GAPVD1-205ENST00000394084 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-205ENST00000394084 GAGE6Q13070 117 aa9.89□□□□□ -0.83
GAPVD1-205ENST00000394084 LRRC75A-AS1Q8N1F1 130 aa9.89□□□□□ -0.83
GAPVD1-205ENST00000394084 COX7A2LO14548 114 aa9.87□□□□□ -0.83
GAPVD1-205ENST00000394084 FAM19A3Q7Z5A8 133 aa9.87□□□□□ -0.83
GAPVD1-205ENST00000394084 TMEM86BQ8N661 226 aa9.87□□□□□ -0.83
GAPVD1-205ENST00000394084 NBPF19A0A087WUL8 3843 aa9.87□□□□□ -0.83
GAPVD1-205ENST00000394084 HIST2H2BCQ6DN03 193 aa9.87□□□□□ -0.83
GAPVD1-205ENST00000394084 TRGV4A0A0C4DH28 118 aa9.86□□□□□ -0.83
GAPVD1-205ENST00000394084 PLAC8L1A1L4L8 177 aa9.86□□□□□ -0.83
GAPVD1-205ENST00000394084 NHLRC4P0CG21 123 aaPredicted RBP9.86□□□□□ -0.83
GAPVD1-205ENST00000394084 NDUFV3P56181 108 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-205ENST00000394084 SHISA2Q6UWI4 295 aa9.85□□□□□ -0.83
GAPVD1-205ENST00000394084 FN1P02751 2386 aaKnown RBP9.85□□□□□ -0.83
GAPVD1-205ENST00000394084 COPS9Q8WXC6 57 aa9.84□□□□□ -0.83
GAPVD1-205ENST00000394084 C16orf74Q96GX8 76 aa9.84□□□□□ -0.83
GAPVD1-205ENST00000394084 IGLV4-60A0A075B6I1 120 aa9.84□□□□□ -0.83
GAPVD1-205ENST00000394084 HERV-K104P63124 156 aa9.84□□□□□ -0.83
GAPVD1-205ENST00000394084 MIR7-3HGQ8N6C7 128 aa9.83□□□□□ -0.84
GAPVD1-205ENST00000394084 COX7B2Q8TF08 81 aa9.83□□□□□ -0.84
GAPVD1-205ENST00000394084 FAM218AQ96MZ4 157 aa9.83□□□□□ -0.84
GAPVD1-205ENST00000394084 LINC01006Q8NI28 216 aa9.83□□□□□ -0.84
GAPVD1-205ENST00000394084 CHCHD5Q9BSY4 110 aa9.83□□□□□ -0.84
GAPVD1-205ENST00000394084 DEFB121Q5J5C9 76 aa9.82□□□□□ -0.84
GAPVD1-205ENST00000394084 B5MCH6 92 aa9.81□□□□□ -0.84
GAPVD1-205ENST00000394084 Q9HAA7 133 aa9.81□□□□□ -0.84
GAPVD1-205ENST00000394084 TRBV6-4A0A1B0GX49 114 aa9.81□□□□□ -0.84
GAPVD1-205ENST00000394084 BAALC-AS2P0C853 105 aa9.81□□□□□ -0.84
GAPVD1-205ENST00000394084 LINC00158P58513 81 aa9.81□□□□□ -0.84
GAPVD1-205ENST00000394084 C5orf38Q86SI9 138 aa9.81□□□□□ -0.84
GAPVD1-205ENST00000394084 C19orf73Q9NVV2 129 aa9.81□□□□□ -0.84
GAPVD1-205ENST00000394084 DEFB130BP0DP73 79 aa9.8□□□□□ -0.84
GAPVD1-205ENST00000394084 DEFB130AP0DP74 79 aa9.8□□□□□ -0.84
GAPVD1-205ENST00000394084 C11orf68Q9H3H3 251 aaKnown RBP9.8□□□□□ -0.84
GAPVD1-205ENST00000394084 SS18L2Q9UHA2 77 aa9.8□□□□□ -0.84
GAPVD1-205ENST00000394084 CCDC179H3BU77 68 aa9.8□□□□□ -0.84
GAPVD1-205ENST00000394084 CRPP02741 224 aa9.8□□□□□ -0.84
GAPVD1-205ENST00000394084 LINC00337Q8N6G1 96 aa9.8□□□□□ -0.84
GAPVD1-205ENST00000394084 SND1-IT1Q9HBX3 110 aa9.8□□□□□ -0.84
GAPVD1-205ENST00000394084 PFN2P35080 140 aa9.79□□□□□ -0.84
GAPVD1-205ENST00000394084 FHL2Q14192 279 aa9.79□□□□□ -0.84
GAPVD1-205ENST00000394084 Q6Q795 121 aa9.79□□□□□ -0.84
GAPVD1-205ENST00000394084 CSNK1G2-AS1Q8NCQ2 148 aa9.79□□□□□ -0.84
GAPVD1-205ENST00000394084 TRBV6-8A0A0A6YYG3 113 aa9.79□□□□□ -0.84
GAPVD1-205ENST00000394084 FAM240AA0A1B0GVK7 77 aa9.79□□□□□ -0.84
GAPVD1-205ENST00000394084 IGLV1-51P01701 117 aa9.79□□□□□ -0.84
GAPVD1-205ENST00000394084 IGKV2-28A0A075B6P5 120 aa9.78□□□□□ -0.84
GAPVD1-205ENST00000394084 IGKV2D-28P01615 120 aa9.78□□□□□ -0.84
GAPVD1-205ENST00000394084 TRACP01848 142 aa9.78□□□□□ -0.84
GAPVD1-205ENST00000394084 OVOL2Q9BRP0 275 aa9.78□□□□□ -0.84
GAPVD1-205ENST00000394084 CMC4P56277 68 aaPredicted RBP9.77□□□□□ -0.84
GAPVD1-205ENST00000394084 TRAV13-2A0A0B4J235 113 aa9.77□□□□□ -0.85
GAPVD1-205ENST00000394084 IGHV3OR16-9A0A0B4J2B5 98 aa9.76□□□□□ -0.85
GAPVD1-205ENST00000394084 MRPL23Q16540 153 aaKnown RBP9.76□□□□□ -0.85
GAPVD1-205ENST00000394084 CCL18P55774 89 aa9.76□□□□□ -0.85
GAPVD1-205ENST00000394084 C22orf24Q9Y442 160 aa9.76□□□□□ -0.85
GAPVD1-205ENST00000394084 CLPSL2Q6UWE3 100 aa9.75□□□□□ -0.85
GAPVD1-205ENST00000394084 SMCR5Q8TEV8 140 aa9.75□□□□□ -0.85
GAPVD1-205ENST00000394084 A0A096LPF7 62 aa9.75□□□□□ -0.85
GAPVD1-205ENST00000394084 TENM4Q6N022 2769 aa9.75□□□□□ -0.85
GAPVD1-205ENST00000394084 RPL28P46779 137 aaKnown RBP9.75□□□□□ -0.85
GAPVD1-205ENST00000394084 SMIM11BQ8TCY0 68 aa9.75□□□□□ -0.85
GAPVD1-205ENST00000394084 GCN1Q92616 2671 aaKnown RBP9.74□□□□□ -0.85
GAPVD1-205ENST00000394084 A0A087WYN8 130 aa9.74□□□□□ -0.85
GAPVD1-205ENST00000394084 XCL1P47992 114 aa9.74□□□□□ -0.85
GAPVD1-205ENST00000394084 NBEAL2Q6ZNJ1 2754 aa9.73□□□□□ -0.85
GAPVD1-205ENST00000394084 PAX4O43316 350 aa9.73□□□□□ -0.85
GAPVD1-205ENST00000394084 ATP5G1P05496 136 aa9.73□□□□□ -0.85
GAPVD1-205ENST00000394084 KRTAP1-1Q07627 177 aa9.73□□□□□ -0.85
GAPVD1-205ENST00000394084 OR13C6PQ8NH95 151 aa9.73□□□□□ -0.85
GAPVD1-205ENST00000394084 RNASE1P07998 156 aaKnown RBP9.73□□□□□ -0.85
GAPVD1-205ENST00000394084 FAM222AQ5U5X8 452 aa9.73□□□□□ -0.85
GAPVD1-205ENST00000394084 A0A087WZ39 114 aa9.73□□□□□ -0.85
GAPVD1-205ENST00000394084 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
GAPVD1-205ENST00000394084 PF4P02776 101 aa9.73□□□□□ -0.85
GAPVD1-205ENST00000394084 GYPEP15421 78 aa9.73□□□□□ -0.85
GAPVD1-205ENST00000394084 GAGE2AQ6NT46 116 aa9.73□□□□□ -0.85
GAPVD1-205ENST00000394084 MALP21145 153 aa9.72□□□□□ -0.85
GAPVD1-205ENST00000394084 ACYP1P07311 99 aa9.72□□□□□ -0.85
GAPVD1-205ENST00000394084 C6orf226Q5I0X4 101 aa9.72□□□□□ -0.85
GAPVD1-205ENST00000394084 C16orf95Q9H693 158 aa9.72□□□□□ -0.85
GAPVD1-205ENST00000394084 DNAL4O96015 105 aa9.71□□□□□ -0.85
GAPVD1-205ENST00000394084 TRBV7-7A0A0K0K1E9 115 aa9.71□□□□□ -0.86
GAPVD1-205ENST00000394084 FAM110AQ9BQ89 295 aa9.71□□□□□ -0.86
GAPVD1-205ENST00000394084 ANK3Q12955 4377 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms