RNA–Protein interactions for RNA: ENST00000392088.6

TUBA4A-202, Transcript of tubulin alpha 4a, humanhuman

TSL 2 BASIC

Gene TUBA4A, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-202ENST00000392088 SMCR5Q8TEV8 140 aa13.91□□□□□ -0.18
TUBA4A-202ENST00000392088 COPS9Q8WXC6 57 aa13.91□□□□□ -0.18
TUBA4A-202ENST00000392088 HERV-K104P63124 156 aa13.9□□□□□ -0.18
TUBA4A-202ENST00000392088 NIPBLQ6KC79 2804 aaeCLIP13.9□□□□□ -0.18
TUBA4A-202ENST00000392088 SETXQ7Z333 2677 aaKnown RBP13.9□□□□□ -0.18
TUBA4A-202ENST00000392088 TRAV25A0A0B4J276 109 aa13.9□□□□□ -0.18
TUBA4A-202ENST00000392088 TRBV7-7A0A0K0K1E9 115 aa13.9□□□□□ -0.18
TUBA4A-202ENST00000392088 GIG44P09565 113 aaPredicted RBP13.9□□□□□ -0.18
TUBA4A-202ENST00000392088 BAALC-AS2P0C853 105 aa13.9□□□□□ -0.18
TUBA4A-202ENST00000392088 TMEM243Q9BU79 118 aa13.9□□□□□ -0.18
TUBA4A-202ENST00000392088 ZNF462Q96JM2 2506 aa13.9□□□□□ -0.18
TUBA4A-202ENST00000392088 NBPF19A0A087WUL8 3843 aa13.9□□□□□ -0.19
TUBA4A-202ENST00000392088 TRACP01848 142 aa13.89□□□□□ -0.19
TUBA4A-202ENST00000392088 CHCHD5Q9BSY4 110 aa13.89□□□□□ -0.19
TUBA4A-202ENST00000392088 UBE2L6O14933 153 aa13.89□□□□□ -0.19
TUBA4A-202ENST00000392088 PLAC8L1A1L4L8 177 aa13.88□□□□□ -0.19
TUBA4A-202ENST00000392088 PLA2G2AP14555 144 aa13.88□□□□□ -0.19
TUBA4A-202ENST00000392088 WFDC10AQ9H1F0 79 aa13.88□□□□□ -0.19
TUBA4A-202ENST00000392088 IGKV3OR2-268A0A0C4DH90 116 aa13.87□□□□□ -0.19
TUBA4A-202ENST00000392088 CCL24O00175 119 aa13.87□□□□□ -0.19
TUBA4A-202ENST00000392088 MIR7-3HGQ8N6C7 128 aa13.87□□□□□ -0.19
TUBA4A-202ENST00000392088 LINC00337Q8N6G1 96 aa13.87□□□□□ -0.19
TUBA4A-202ENST00000392088 DEFB113Q30KQ7 82 aa13.86□□□□□ -0.19
TUBA4A-202ENST00000392088 Q9HAA7 133 aa13.86□□□□□ -0.19
TUBA4A-202ENST00000392088 IGKV2-28A0A075B6P5 120 aa13.86□□□□□ -0.19
TUBA4A-202ENST00000392088 IGKV2D-28P01615 120 aa13.86□□□□□ -0.19
TUBA4A-202ENST00000392088 TOMM7Q9P0U1 55 aa13.86□□□□□ -0.19
TUBA4A-202ENST00000392088 SETD2Q9BYW2 2564 aaPredicted RBP13.85□□□□□ -0.19
TUBA4A-202ENST00000392088 HIST2H2BCQ6DN03 193 aa13.85□□□□□ -0.19
TUBA4A-202ENST00000392088 COX7B2Q8TF08 81 aa13.85□□□□□ -0.19
TUBA4A-202ENST00000392088 ACYP1P07311 99 aa13.85□□□□□ -0.19
TUBA4A-202ENST00000392088 TRGV2A0A075B6R0 118 aa13.84□□□□□ -0.19
TUBA4A-202ENST00000392088 IGLV4-60A0A075B6I1 120 aa13.84□□□□□ -0.19
TUBA4A-202ENST00000392088 RPL28P46779 137 aaKnown RBP13.83□□□□□ -0.2
TUBA4A-202ENST00000392088 DNAJC9-AS1A6NH13 148 aa13.83□□□□□ -0.2
TUBA4A-202ENST00000392088 RPL35AP18077 110 aaKnown RBP13.83□□□□□ -0.2
TUBA4A-202ENST00000392088 PPDPFQ9H3Y8 114 aa13.83□□□□□ -0.2
TUBA4A-202ENST00000392088 KRTAP1-3Q8IUG1 177 aa13.82□□□□□ -0.2
TUBA4A-202ENST00000392088 SND1-IT1Q9HBX3 110 aa13.82□□□□□ -0.2
TUBA4A-202ENST00000392088 CRPP02741 224 aa13.82□□□□□ -0.2
TUBA4A-202ENST00000392088 TRAV13-2A0A0B4J235 113 aa13.81□□□□□ -0.2
TUBA4A-202ENST00000392088 FAM236AA0A1B0GUQ0 79 aa13.81□□□□□ -0.2
TUBA4A-202ENST00000392088 FAM236BA0A1B0GV22 79 aa13.81□□□□□ -0.2
TUBA4A-202ENST00000392088 ITPR3Q14573 2671 aa13.81□□□□□ -0.2
TUBA4A-202ENST00000392088 ESM1Q9NQ30 184 aa13.81□□□□□ -0.2
TUBA4A-202ENST00000392088 FAM222AQ5U5X8 452 aa13.8□□□□□ -0.2
TUBA4A-202ENST00000392088 SVIPQ8NHG7 77 aa13.8□□□□□ -0.2
TUBA4A-202ENST00000392088 C16orf74Q96GX8 76 aa13.8□□□□□ -0.2
TUBA4A-202ENST00000392088 TRBV6-4A0A1B0GX49 114 aa13.79□□□□□ -0.2
TUBA4A-202ENST00000392088 PF4P02776 101 aa13.79□□□□□ -0.2
TUBA4A-202ENST00000392088 LINC00158P58513 81 aa13.79□□□□□ -0.2
TUBA4A-202ENST00000392088 SDIM1Q6ZPB5 146 aa13.79□□□□□ -0.2
TUBA4A-202ENST00000392088 SMIM11BQ8TCY0 68 aa13.79□□□□□ -0.2
TUBA4A-202ENST00000392088 UBR5O95071 2799 aaPredicted RBP13.79□□□□□ -0.2
TUBA4A-202ENST00000392088 A0A087WYN8 130 aa13.79□□□□□ -0.2
TUBA4A-202ENST00000392088 IGHV3OR16-9A0A0B4J2B5 98 aa13.79□□□□□ -0.2
TUBA4A-202ENST00000392088 TRGV4A0A0C4DH28 118 aa13.79□□□□□ -0.2
TUBA4A-202ENST00000392088 MALP21145 153 aa13.79□□□□□ -0.2
TUBA4A-202ENST00000392088 CCL18P55774 89 aa13.79□□□□□ -0.2
TUBA4A-202ENST00000392088 LINC00643Q86TS7 51 aa13.79□□□□□ -0.2
TUBA4A-202ENST00000392088 C9orf129Q5T035 196 aaKnown RBP13.78□□□□□ -0.2
TUBA4A-202ENST00000392088 TMEM86BQ8N661 226 aa13.78□□□□□ -0.2
TUBA4A-202ENST00000392088 C3orf56Q8N813 242 aa13.78□□□□□ -0.2
TUBA4A-202ENST00000392088 BBC3Q96PG8 261 aaPredicted RBP13.78□□□□□ -0.2
TUBA4A-202ENST00000392088 APCP25054 2843 aa13.78□□□□□ -0.2
TUBA4A-202ENST00000392088 IMUPQ9GZP8 106 aa13.78□□□□□ -0.2
TUBA4A-202ENST00000392088 C5orf38Q86SI9 138 aa13.76□□□□□ -0.21
TUBA4A-202ENST00000392088 CSNK1G2-AS1Q8NCQ2 148 aa13.76□□□□□ -0.21
TUBA4A-202ENST00000392088 C19orf73Q9NVV2 129 aa13.76□□□□□ -0.21
TUBA4A-202ENST00000392088 TRBV6-8A0A0A6YYG3 113 aa13.76□□□□□ -0.21
TUBA4A-202ENST00000392088 FHL2Q14192 279 aa13.76□□□□□ -0.21
TUBA4A-202ENST00000392088 GAGE2AQ6NT46 116 aa13.76□□□□□ -0.21
TUBA4A-202ENST00000392088 CCDC168Q8NDH2 2452 aa13.75□□□□□ -0.21
TUBA4A-202ENST00000392088 LRRC75A-AS1Q8N1F1 130 aa13.75□□□□□ -0.21
TUBA4A-202ENST00000392088 OVOL2Q9BRP0 275 aa13.75□□□□□ -0.21
TUBA4A-202ENST00000392088 USP24Q9UPU5 2620 aa13.75□□□□□ -0.21
TUBA4A-202ENST00000392088 PFN2P35080 140 aa13.75□□□□□ -0.21
TUBA4A-202ENST00000392088 ATP5G1P05496 136 aa13.74□□□□□ -0.21
TUBA4A-202ENST00000392088 INAFM2P0DMQ5 153 aa13.72□□□□□ -0.21
TUBA4A-202ENST00000392088 A0A087WZ39 114 aa13.72□□□□□ -0.21
TUBA4A-202ENST00000392088 C11orf68Q9H3H3 251 aaKnown RBP13.72□□□□□ -0.21
TUBA4A-202ENST00000392088 FLNAP21333 2647 aaKnown RBP13.71□□□□□ -0.21
TUBA4A-202ENST00000392088 IBA57-AS1B1ANH7 110 aa13.71□□□□□ -0.21
TUBA4A-202ENST00000392088 WFDC11Q8NEX6 87 aa13.71□□□□□ -0.21
TUBA4A-202ENST00000392088 DNAL4O96015 105 aa13.69□□□□□ -0.22
TUBA4A-202ENST00000392088 IGLV1-51P01701 117 aa13.69□□□□□ -0.22
TUBA4A-202ENST00000392088 SMIM20Q8N5G0 67 aa13.69□□□□□ -0.22
TUBA4A-202ENST00000392088 C14orf132Q9NPU4 83 aa13.69□□□□□ -0.22
TUBA4A-202ENST00000392088 FN1P02751 2386 aaKnown RBP13.69□□□□□ -0.22
TUBA4A-202ENST00000392088 LINC00959A0A1B0GUT2 108 aa13.69□□□□□ -0.22
TUBA4A-202ENST00000392088 LINC01006Q8NI28 216 aa13.69□□□□□ -0.22
TUBA4A-202ENST00000392088 PAX4O43316 350 aa13.68□□□□□ -0.22
TUBA4A-202ENST00000392088 LECT2O14960 151 aa13.68□□□□□ -0.22
TUBA4A-202ENST00000392088 CMC4P56277 68 aaPredicted RBP13.68□□□□□ -0.22
TUBA4A-202ENST00000392088 OR13C6PQ8NH95 151 aa13.67□□□□□ -0.22
TUBA4A-202ENST00000392088 H0YGX0 51 aa13.66□□□□□ -0.22
TUBA4A-202ENST00000392088 SLPIP03973 132 aa13.66□□□□□ -0.22
TUBA4A-202ENST00000392088 DEFB130BP0DP73 79 aa13.66□□□□□ -0.22
TUBA4A-202ENST00000392088 DEFB130AP0DP74 79 aa13.66□□□□□ -0.22
TUBA4A-202ENST00000392088 XCL1P47992 114 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms