RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 ASCC3Q8N3C0 2202 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 KIAA2026Q5HYC2 2103 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 DOCK7Q96N67 2140 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 CR1P17927 2039 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TTC3P53804 2025 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 EVPLQ92817 2033 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 HELZP42694 1942 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 WDR81Q562E7 1941 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 DLG5Q8TDM6 1919 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 CEP192Q8TEP8 1941 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 DNAH12Q6ZR08 3092 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 CHD2O14647 1828 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 XIRP1Q702N8 1843 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 SLX4Q8IY92 1834 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 KIAA1671Q9BY89 1806 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A0G2JMZ2 1700 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 LRRC37A2A6NM11 1700 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 RGPD1P0DJD0 1748 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 SPHKAPQ2M3C7 1700 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 UBR1Q8IWV7 1749 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 XRN1Q8IZH2 1706 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TOGARAM1Q9Y4F4 1720 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TOP2BQ02880 1626 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TARBP1Q13395 1621 aaKnown RBP-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 RAPGEF6Q8TEU7 1601 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 MADDQ8WXG6 1647 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 CC2D2AQ9P2K1 1620 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 MAP3K4Q9Y6R4 1608 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 NFAT5O94916 1531 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 ABCC6O95255 1503 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 LMTK2Q8IWU2 1503 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 SYCP2Q9BX26 1530 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 KDM5DQ9BY66 1539 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 CLIP1P30622 1438 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 NAIPQ13075 1403 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 VPS8Q8N3P4 1428 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 PRR14LQ5THK1 2151 aa-0.13□□□□□ -2.43
TRAJ54-201ENST00000390484 TDRD6O60522 2096 aaKnown RBP-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 KAT6BQ8WYB5 2073 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 TANC2Q9HCD6 1990 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 MGAMO43451 1857 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 SBF1O95248 1867 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 NLRC5Q86WI3 1866 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 GBF1Q92538 1859 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 PLXNA1Q9UIW2 1896 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 PAPPA2Q9BXP8 1791 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 SCN11AQ9UI33 1791 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 DLEC1Q9Y238 1755 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 KIF1AQ12756 1690 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 ZC3H13Q5T200 1668 aaKnown RBP-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 KIF21AQ7Z4S6 1674 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 F5P12259 2224 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 MYO7AQ13402 2215 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 SPAG17Q6Q759 2223 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 PCNX2A6NKB5 2137 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 NUMA1Q14980 2115 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 CCDC141Q6ZP82 1450 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 PRXQ9BXM0 1461 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 HCFC1P51610 2035 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 TET2Q6N021 2002 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 KAT6AQ92794 2004 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 CCDC88CQ9P219 2028 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 ROCK2O75116 1388 aaKnown RBP-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 RLFQ13129 1914 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 ATG2AQ2TAZ0 1938 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 KIAA1217Q5T5P2 1943 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 CFAP65Q6ZU64 1925 aaKnown RBP-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 TICRRQ7Z2Z1 1910 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 PLXNB2O15031 1838 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 ECM29Q5VYK3 1845 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 TUBGCP6Q96RT7 1819 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 ZNF236Q9UL36 1845 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV30A0A087WSZ9 112 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 DEFB131BA0A096LNP1 70 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 TRGV10A0A0A0MS01 117 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 IGHV1-24A0A0C4DH33 117 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 SPTY2D1-AS1A0A0U1RR47 76 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 A0A1B0GV90 55 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 LOC105371267A0A1B0GV96 52 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 ETDCA0A1B0GVM5 59 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 C20orf202A1L168 122 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 FAM92AA1XBS5 289 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 SMCO3A2RU48 225 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 C7orf77A4D0Y5 90 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 ARL5CA6NH57 179 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 IGIPA6NJ69 53 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 PCP4L1A6NKN8 68 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 RIIAD1A6NNX1 92 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 CENPXA8MT69 81 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 A8MTW9 85 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 BBIP1A8MTZ0 92 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 IQCF6A8MYZ5 107 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 MIF4GDA9UHW6 222 aaKnown RBP-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 LINC00587B1AMM8 73 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 C5orf58C9J3I9 102 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 HSBP1L1C9JCN9 74 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 PPP5D1E7EU14 171 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 TMEM262E9PQX1 116 aa-0.14□□□□□ -2.43
TRAJ54-201ENST00000390484 F6UZH7 168 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms