RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 A8MTW9 85 aa11.63□□□□□ -0.55
TNIP1-202ENST00000389378 ODF3L2Q3SX64 289 aa11.63□□□□□ -0.55
TNIP1-202ENST00000389378 PLA2G2AP14555 144 aa11.62□□□□□ -0.55
TNIP1-202ENST00000389378 NOP10Q9NPE3 64 aaKnown RBP11.62□□□□□ -0.55
TNIP1-202ENST00000389378 GAGE2AQ6NT46 116 aa11.62□□□□□ -0.55
TNIP1-202ENST00000389378 CDC42SE2Q9NRR3 84 aa11.61□□□□□ -0.55
TNIP1-202ENST00000389378 F5H768 121 aa11.6□□□□□ -0.55
TNIP1-202ENST00000389378 K7EQD1 137 aa11.6□□□□□ -0.55
TNIP1-202ENST00000389378 UBE2L6O14933 153 aa11.6□□□□□ -0.55
TNIP1-202ENST00000389378 HERV-K104P63124 156 aa11.6□□□□□ -0.55
TNIP1-202ENST00000389378 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
TNIP1-202ENST00000389378 MIR7-3HGQ8N6C7 128 aa11.6□□□□□ -0.55
TNIP1-202ENST00000389378 GCN1Q92616 2671 aaKnown RBP11.6□□□□□ -0.55
TNIP1-202ENST00000389378 C22orf24Q9Y442 160 aa11.59□□□□□ -0.55
TNIP1-202ENST00000389378 A0A096LNT2 108 aa11.59□□□□□ -0.55
TNIP1-202ENST00000389378 TRBV7-7A0A0K0K1E9 115 aa11.59□□□□□ -0.55
TNIP1-202ENST00000389378 WFDC10AQ9H1F0 79 aa11.59□□□□□ -0.55
TNIP1-202ENST00000389378 LINC00337Q8N6G1 96 aa11.58□□□□□ -0.56
TNIP1-202ENST00000389378 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.56
TNIP1-202ENST00000389378 ATP5G1P05496 136 aa11.57□□□□□ -0.56
TNIP1-202ENST00000389378 LINC00158P58513 81 aa11.57□□□□□ -0.56
TNIP1-202ENST00000389378 C9orf129Q5T035 196 aaKnown RBP11.57□□□□□ -0.56
TNIP1-202ENST00000389378 PFN2P35080 140 aa11.57□□□□□ -0.56
TNIP1-202ENST00000389378 CR1P17927 2039 aa11.57□□□□□ -0.56
TNIP1-202ENST00000389378 ITPR3Q14573 2671 aa11.57□□□□□ -0.56
TNIP1-202ENST00000389378 DSCR9P59020 149 aa11.56□□□□□ -0.56
TNIP1-202ENST00000389378 TRGV2A0A075B6R0 118 aa11.56□□□□□ -0.56
TNIP1-202ENST00000389378 CRPP02741 224 aa11.56□□□□□ -0.56
TNIP1-202ENST00000389378 IGHV4-31P0DP07 118 aa11.56□□□□□ -0.56
TNIP1-202ENST00000389378 FLNAP21333 2647 aaKnown RBP11.56□□□□□ -0.56
TNIP1-202ENST00000389378 C4orf3Q8WVX3 66 aa11.56□□□□□ -0.56
TNIP1-202ENST00000389378 SND1-IT1Q9HBX3 110 aa11.56□□□□□ -0.56
TNIP1-202ENST00000389378 A0A087WYN8 130 aa11.55□□□□□ -0.56
TNIP1-202ENST00000389378 J3QLI3 93 aa11.55□□□□□ -0.56
TNIP1-202ENST00000389378 KRTAP10-9P60411 292 aa11.55□□□□□ -0.56
TNIP1-202ENST00000389378 HIST2H2BCQ6DN03 193 aa11.55□□□□□ -0.56
TNIP1-202ENST00000389378 TMEM243Q9BU79 118 aa11.55□□□□□ -0.56
TNIP1-202ENST00000389378 TRACP01848 142 aa11.55□□□□□ -0.56
TNIP1-202ENST00000389378 RPL35AP18077 110 aaKnown RBP11.55□□□□□ -0.56
TNIP1-202ENST00000389378 IGKV2-28A0A075B6P5 120 aa11.54□□□□□ -0.56
TNIP1-202ENST00000389378 IGKV2D-28P01615 120 aa11.54□□□□□ -0.56
TNIP1-202ENST00000389378 COPS9Q8WXC6 57 aa11.54□□□□□ -0.56
TNIP1-202ENST00000389378 ACYP1P07311 99 aa11.54□□□□□ -0.56
TNIP1-202ENST00000389378 C5orf38Q86SI9 138 aa11.54□□□□□ -0.56
TNIP1-202ENST00000389378 LINC00643Q86TS7 51 aa11.53□□□□□ -0.56
TNIP1-202ENST00000389378 C14orf132Q9NPU4 83 aa11.53□□□□□ -0.56
TNIP1-202ENST00000389378 IGLV4-60A0A075B6I1 120 aa11.53□□□□□ -0.56
TNIP1-202ENST00000389378 MALP21145 153 aa11.53□□□□□ -0.56
TNIP1-202ENST00000389378 COX7B2Q8TF08 81 aa11.53□□□□□ -0.56
TNIP1-202ENST00000389378 SMIM11BQ8TCY0 68 aa11.53□□□□□ -0.56
TNIP1-202ENST00000389378 SLPIP03973 132 aa11.52□□□□□ -0.57
TNIP1-202ENST00000389378 PRB1P04280 392 aa11.52□□□□□ -0.57
TNIP1-202ENST00000389378 OR13C6PQ8NH95 151 aa11.52□□□□□ -0.57
TNIP1-202ENST00000389378 CSDC2Q9Y534 153 aaKnown RBP11.52□□□□□ -0.57
TNIP1-202ENST00000389378 APCP25054 2843 aa11.52□□□□□ -0.57
TNIP1-202ENST00000389378 DNAL4O96015 105 aa11.51□□□□□ -0.57
TNIP1-202ENST00000389378 C9orf153Q5TBE3 101 aa11.51□□□□□ -0.57
TNIP1-202ENST00000389378 TRBV10-1A0A0K0K1A3 114 aa11.51□□□□□ -0.57
TNIP1-202ENST00000389378 SDIM1Q6ZPB5 146 aa11.51□□□□□ -0.57
TNIP1-202ENST00000389378 KLK5Q9Y337 293 aaPredicted RBP11.51□□□□□ -0.57
TNIP1-202ENST00000389378 TRAV13-2A0A0B4J235 113 aa11.5□□□□□ -0.57
TNIP1-202ENST00000389378 FSHBP01225 129 aa11.5□□□□□ -0.57
TNIP1-202ENST00000389378 TRGV4A0A0C4DH28 118 aa11.49□□□□□ -0.57
TNIP1-202ENST00000389378 IGKV3D-7A0A0C4DH55 119 aa11.49□□□□□ -0.57
TNIP1-202ENST00000389378 PAX4O43316 350 aa11.49□□□□□ -0.57
TNIP1-202ENST00000389378 CCL18P55774 89 aa11.49□□□□□ -0.57
TNIP1-202ENST00000389378 IL17DQ8TAD2 202 aa11.49□□□□□ -0.57
TNIP1-202ENST00000389378 FAM19A3Q7Z5A8 133 aa11.49□□□□□ -0.57
TNIP1-202ENST00000389378 LECT2O14960 151 aa11.49□□□□□ -0.57
TNIP1-202ENST00000389378 RPL28P46779 137 aaKnown RBP11.49□□□□□ -0.57
TNIP1-202ENST00000389378 CLPSL2Q6UWE3 100 aa11.47□□□□□ -0.57
TNIP1-202ENST00000389378 CCL24O00175 119 aa11.47□□□□□ -0.57
TNIP1-202ENST00000389378 NCR3O14931 201 aa11.47□□□□□ -0.57
TNIP1-202ENST00000389378 INAFM2P0DMQ5 153 aa11.47□□□□□ -0.57
TNIP1-202ENST00000389378 FAM110AQ9BQ89 295 aa11.47□□□□□ -0.57
TNIP1-202ENST00000389378 IMUPQ9GZP8 106 aa11.47□□□□□ -0.57
TNIP1-202ENST00000389378 GIG44P09565 113 aaPredicted RBP11.46□□□□□ -0.57
TNIP1-202ENST00000389378 HIVEP2P31629 2446 aa11.45□□□□□ -0.58
TNIP1-202ENST00000389378 C3orf22Q8N5N4 141 aa11.45□□□□□ -0.58
TNIP1-202ENST00000389378 A0A087WVE0 104 aa11.44□□□□□ -0.58
TNIP1-202ENST00000389378 PRR3P79522 188 aaKnown RBP11.44□□□□□ -0.58
TNIP1-202ENST00000389378 PLAC8L1A1L4L8 177 aa11.44□□□□□ -0.58
TNIP1-202ENST00000389378 DEFB130BP0DP73 79 aa11.44□□□□□ -0.58
TNIP1-202ENST00000389378 DEFB130AP0DP74 79 aa11.44□□□□□ -0.58
TNIP1-202ENST00000389378 USP24Q9UPU5 2620 aa11.44□□□□□ -0.58
TNIP1-202ENST00000389378 A0A096LPF7 62 aa11.43□□□□□ -0.58
TNIP1-202ENST00000389378 XCL1P47992 114 aa11.43□□□□□ -0.58
TNIP1-202ENST00000389378 FAM222AQ5U5X8 452 aa11.43□□□□□ -0.58
TNIP1-202ENST00000389378 PPDPFQ9H3Y8 114 aa11.43□□□□□ -0.58
TNIP1-202ENST00000389378 LINC00846Q9NV44 126 aa11.43□□□□□ -0.58
TNIP1-202ENST00000389378 IGHV3OR16-9A0A0B4J2B5 98 aa11.42□□□□□ -0.58
TNIP1-202ENST00000389378 C6orf226Q5I0X4 101 aa11.42□□□□□ -0.58
TNIP1-202ENST00000389378 PF4P02776 101 aa11.42□□□□□ -0.58
TNIP1-202ENST00000389378 TRBV6-8A0A0A6YYG3 113 aa11.41□□□□□ -0.58
TNIP1-202ENST00000389378 LRRC75A-AS1Q8N1F1 130 aa11.41□□□□□ -0.58
TNIP1-202ENST00000389378 LOC107984640A0A0U1RRK4 108 aa11.41□□□□□ -0.58
TNIP1-202ENST00000389378 UQCRQO14949 82 aa11.4□□□□□ -0.58
TNIP1-202ENST00000389378 TMEM126AQ9H061 195 aa11.4□□□□□ -0.58
TNIP1-202ENST00000389378 RNASE1P07998 156 aaKnown RBP11.39□□□□□ -0.59
TNIP1-202ENST00000389378 DNAJC9-AS1A6NH13 148 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms